Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D02_e12_08.seq
         (1515 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31 pro...   180   9e-45
X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for ...   180   9e-45
BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31 p...   180   9e-45
BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31 p...   180   9e-45
AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.             180   9e-45
AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31 p...   180   9e-45
BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.       169   2e-41
AB007180-1|BAA25839.1|   47|Homo sapiens ribosomal protein L31 p...    55   8e-07

>X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31
           protein.
          Length = 121

 Score =  180 bits (439), Expect = 9e-45
 Identities = 80/115 (69%), Positives = 97/115 (84%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 5   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 64

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 65  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119


>X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for
           ribosomal protein L31. ).
          Length = 125

 Score =  180 bits (439), Expect = 9e-45
 Identities = 80/115 (69%), Positives = 97/115 (84%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 9   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 68

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 69  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  180 bits (439), Expect = 9e-45
 Identities = 80/115 (69%), Positives = 97/115 (84%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 9   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 68

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 69  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  180 bits (439), Expect = 9e-45
 Identities = 80/115 (69%), Positives = 97/115 (84%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 9   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 68

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 69  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.
          Length = 125

 Score =  180 bits (439), Expect = 9e-45
 Identities = 80/115 (69%), Positives = 97/115 (84%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 9   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 68

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 69  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  180 bits (439), Expect = 9e-45
 Identities = 80/115 (69%), Positives = 97/115 (84%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 9   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 68

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 69  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.
          Length = 121

 Score =  169 bits (411), Expect = 2e-41
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = +2

Query: 116 EXRKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRRFAEKQMGTPDVRVDTRL 295
           E +KG+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIR+FA K+MGTPDVR+DTRL
Sbjct: 9   EKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRL 68

Query: 296 NKYLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIK 436
           NK +W+KG+RNVP+          N+DEDS +KL+TLVTYVPV + K
Sbjct: 69  NKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115


>AB007180-1|BAA25839.1|   47|Homo sapiens ribosomal protein L31
           protein.
          Length = 47

 Score = 54.8 bits (126), Expect = 8e-07
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +2

Query: 326 NVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 460
           NVP+          N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1   NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,018,107
Number of Sequences: 237096
Number of extensions: 2586503
Number of successful extensions: 7223
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7223
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22526554074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)