Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_D01_e4_07.seq
(1564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 38 0.016
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 34 0.35
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 33 0.81
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 32 1.4
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351... 31 1.9
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 31 1.9
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 31 1.9
05_07_0046 + 27310074-27310229,27310331-27310459,27311331-273114... 31 2.5
02_01_0597 - 4433105-4433467,4433671-4433860,4434569-4434786,443... 31 3.3
04_04_1614 + 34786296-34786315,34787432-34788347,34788426-347889... 30 4.3
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 30 5.7
06_01_1049 + 8257930-8258316 29 7.6
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 29 7.6
02_01_0687 - 5118774-5119412,5120359-5120424,5120636-5120690,512... 29 10.0
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 38.3 bits (85), Expect = 0.016
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 10/149 (6%)
Frame = +1
Query: 139 IDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEH---ELQDARK-------LLDDT 288
++ +R+LE ENSGL+ E++ R V ++G+ E E+ D +K LL
Sbjct: 272 VEHIRKLEEENSGLKLELEKANVAEQRAV-ELEGVVEQLEVEIADVKKARARSEELLGKW 330
Query: 289 SREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADK 468
+ +LE+ L+ N L + E+ +K + +
Sbjct: 331 KTKALELEVRLEEADQSNILKGESLESAMKELDAKMTLLQEKESEIEALQDKVRSLEDEV 390
Query: 469 KKAQDEARDLAKELEKLRKVYADTRXTLE 555
K +++ KE ++LR D R LE
Sbjct: 391 AKQKEDFHTADKEADELRLEIEDLRLKLE 419
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 33.9 bits (74), Expect = 0.35
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +1
Query: 106 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLD 282
L+ L+D +A +DK++ ES+NS ++ E++T + V + E EL+ +RK ++
Sbjct: 493 LKKLSDDMAMEVDKLKCAESQNSAMQSELETLDQKVR--------VQEQELEQSRKEIE 543
>04_04_1509 - 34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 32.7 bits (71), Expect = 0.81
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Frame = +1
Query: 91 K*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDAR 270
K ++ L++ L A + ++L EN+ L +++Q + + E SN++ +YE E
Sbjct: 717 KLEEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKSNMERVYEDE---CC 773
Query: 271 KLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRF-TEESNKY 447
KL + + KLE + L + L E + + N+
Sbjct: 774 KLKSRIAELEQKLESRTRSLNVTESTLALRNAEVDTLQNSLKELDELREFKADVDRKNQQ 833
Query: 448 NTALADKKKAQ-DEARDLAKELEKLRKVYADTRXTLEEE--MLCRI 576
+ ++ AQ E +L K+ + LRK Y +T ++ + + CR+
Sbjct: 834 TAEILKRQGAQLIELENLYKQEQVLRKRYYNTIEDMKGKIRVFCRL 879
>03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 31.9 bits (69), Expect = 1.4
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 1/156 (0%)
Frame = +1
Query: 142 DKVRQLESENSGLRREIQTTQEVVTR-EVSNIKGIYEHELQDARKLLDDTSREKAKLEID 318
D++ L + L+ EIQ+ + +++ +++H+ Q ++ D LE
Sbjct: 635 DEINSLTDSRNELQNEIQSLRSTISQLNTEKDAALFQHQ-QSVERVSD--------LESQ 685
Query: 319 LKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDL 498
L +L E +Q A + + +E N++ AD + ++ L
Sbjct: 686 LLKLQPELEEIEQKVQMLMQDLEQKRQEADNAHAQLQDECNRHTQTEADLHRFKNLHSQL 745
Query: 499 AKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLR 606
+E+ KL + + LEE ++ +ENT L+
Sbjct: 746 EEEVIKLTENLDRSTKGLEELENAKLDLENTSRELK 781
>12_01_0445 -
3513733-3513819,3514392-3514613,3514730-3514999,
3515033-3517110,3517649-3517976,3519136-3519255,
3519299-3519352,3520115-3520154,3520344-3520411
Length = 1088
Score = 31.5 bits (68), Expect = 1.9
Identities = 29/149 (19%), Positives = 62/149 (41%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K+ L++LND+LAA + E +R+ + T+E V E E+ +KL
Sbjct: 167 KENLKSLNDKLAAAFLTINAKEEL---VRQHAKVTEEAVLGWEQA-----ESEVAALKKL 218
Query: 277 LDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTA 456
L+ ++++ LE+ + L +N ++ R +++ K +
Sbjct: 219 LEASAQKNGSLEVQVSHLAEKNASLEVQVSRLDEALKEC---VRQLHLAQEDQAEKVHDV 275
Query: 457 LADKKKAQDEARDLAKELEKLRKVYADTR 543
+ ++ + E L + +L+K T+
Sbjct: 276 VTKSQELESENSKLQNRITELKKQLETTK 304
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 31.5 bits (68), Expect = 1.9
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 1/156 (0%)
Frame = +1
Query: 142 DKVRQLESENSGLRREIQTTQEVVTR-EVSNIKGIYEHELQDARKLLDDTSREKAKLEID 318
D++ L+ + L+ EIQ+ + +++ +++H+ Q ++ D LE
Sbjct: 415 DEINSLKDSKNELQNEIQSLRSTISQLNTEKDATLFQHQ-QSVERVSD--------LESQ 465
Query: 319 LKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDL 498
L +L E +Q A + +E N++ AD + ++ L
Sbjct: 466 LLKLQPELEEIEQKVQMLMQDLEQKRQEADSAHAQLQDECNRHTQTEADLHRFKNLHSQL 525
Query: 499 AKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLR 606
+E+ KL + + LEE ++ +ENT L+
Sbjct: 526 EEEVIKLTENLDRSTKELEELENAKLDLENTSRELK 561
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 31.5 bits (68), Expect = 1.9
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 100 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLL 279
D +Q+ +A + D +R+LE EN G + + T+ + E+ + + L
Sbjct: 1475 DEMQDNVASIAEHEDTIRRLE-ENVGAKESLLLTEREQNASTLKLLAEAHLEIDELIRKL 1533
Query: 280 DDTSREKAKLEIDLKRL 330
+D+ R+ L+ +KRL
Sbjct: 1534 EDSDRKSDSLQSTIKRL 1550
>05_07_0046 +
27310074-27310229,27310331-27310459,27311331-27311496,
27311577-27311624,27312189-27312274,27312385-27312453,
27312549-27312593,27312697-27312759,27312848-27312924,
27313125-27313140
Length = 284
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 427 TEESNKYNTALADKKKAQDEARDLAKE-LEKLRKVYADTRXTLEEEMLCRIXMENTV 594
TEESN++ +K QDE D+ E LE L+ + +D L+ ++ M+ V
Sbjct: 178 TEESNQFRREYEMRKMKQDEGLDIIGEGLETLKNMASDMNEELDRQVPLMDEMDEKV 234
>02_01_0597 - 4433105-4433467,4433671-4433860,4434569-4434786,
4434882-4436556,4437137-4438113
Length = 1140
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 439 NKYNTALADKKKAQDEARD----LAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLR 606
++ + L DK K DE L E+ L+K T+ L+E + + +EN + R
Sbjct: 839 SELQSTLEDKSKRLDETESKLNALVDEVNSLKKELEHTQGLLDESQMNCVQLENCLHEAR 898
Query: 607 EE 612
EE
Sbjct: 899 EE 900
>04_04_1614 +
34786296-34786315,34787432-34788347,34788426-34788950,
34789065-34789442,34790435-34790740
Length = 714
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 178 LRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXE 339
L R + ++++ + +G+ L D RKLL+ + E A + D++RLY E
Sbjct: 434 LARAQEWVEKLLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNE 487
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 29.9 bits (64), Expect = 5.7
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +1
Query: 121 DRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSREK 300
D+L A V +LE + S L++++Q T+ I ++ E R++ + +E
Sbjct: 1672 DQLEAEQQHVAELEVQVSSLKQQLQETE---------IHYKHKEEQVSLREVQWEADQEH 1722
Query: 301 AKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNK---YNTALADKK 471
+ E+ +R Y QQ + + + YE + TEE K NT ++
Sbjct: 1723 SVSELKAQRQYAAELEKQIGALT-----QQLQLVEKQYEQKVTEEREKLALVNTEVSKLT 1777
Query: 472 KAQDEARDLAKELEKLRK 525
+ ++ ++ K++E L +
Sbjct: 1778 QKLSKSAEMEKKIEHLEQ 1795
>06_01_1049 + 8257930-8258316
Length = 128
Score = 29.5 bits (63), Expect = 7.6
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 365 TRKPRTVNKPRIWRAIMRRASQRRATNTILLXQIKRRLKMKPGTSRRNSRNYVKCMXTRG 544
T +PR + +PR+ + R T+ +++R + + G S + SR++ + +RG
Sbjct: 42 TNRPRELARPRVNTSRGRAGRAETQEETVPRGTVQKRTRTRRGASHK-SRSHERDAGSRG 100
Query: 545 XRW-KRRCFAASXWRI 589
R C W +
Sbjct: 101 SYGVLRHCVVGDSWLV 116
>02_01_0055 +
410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 29.5 bits (63), Expect = 7.6
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 100 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT 216
+ + NL+ RL+AY VR+L + + +++I TQ +VT
Sbjct: 586 EVVGNLSARLSAYGITVRELSGDQNLTKQQIDETQIIVT 624
>02_01_0687 -
5118774-5119412,5120359-5120424,5120636-5120690,
5120795-5121354
Length = 439
Score = 29.1 bits (62), Expect = 10.0
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Frame = +1
Query: 154 QLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLK--- 324
+L + LR+E+ Q+ R + + E Q+AR +LD + AK+E DLK
Sbjct: 70 RLAMSHDSLRKELAAAQQEAQRLQAQGQAAMAAEEQEARGILD----KVAKMEADLKARD 125
Query: 325 ----RLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEAR 492
L + + L++ + R E+ + +A++ A+ E +
Sbjct: 126 PVKAELQQAHAEAQGLVVARQQLAADTQKLSKDLQ-RNLGEAQQLPALVAERDAARQEYQ 184
Query: 493 DLAKELEKLRKVYADTRXTLEEE 561
L E RK+ D +L+++
Sbjct: 185 HLRATYEYERKLRMDHSESLQDD 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,497,709
Number of Sequences: 37544
Number of extensions: 274338
Number of successful extensions: 816
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5046916980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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