Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D01_e4_07.seq
         (1564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    29   0.36 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.48 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   1.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   7.8  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   7.8  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   7.8  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 29.1 bits (62), Expect = 0.36
 Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 3/169 (1%)
 Frame = +1

Query: 61   ARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQE---VVTREVSN 231
            A   Q   + K K+ ++ +    AA+   V Q+E E +  RRE+Q   +    + + ++N
Sbjct: 865  AEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQALAKELAAIHQSIAN 924

Query: 232  IKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARH 411
            I+   E      + +L     E   +EI L +   ++              ++   +   
Sbjct: 925  IESRIESMKSKRQTILMQAKME--SIEIPLLQGSMDDIGQQEYAADGGSAYERESRIEID 982

Query: 412  YETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEE 558
            Y ++        +     KK     A++L  +L+ L K+       +++
Sbjct: 983  Y-SKLEHHLKNLSDPDQIKKSGDSLAKELQSKLDTLEKIQTPNMKAMQK 1030



 Score = 26.2 bits (55), Expect = 2.6
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = +1

Query: 415 ETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTV 594
           + R   E NK      + KK + E  +  K  EKL      +R  LEE+   +  +   V
Sbjct: 414 QDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDV 473

Query: 595 XSLRE 609
            + +E
Sbjct: 474 GTSKE 478


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.7 bits (61), Expect = 0.48
 Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
 Frame = +1

Query: 97  KDALQNLNDRLAAYID---KVRQLESENSGLRREIQTT--QEVVTREVSNIKGIYEHELQ 261
           +D  +N+N   AAY++   K+ ++E +   L RE+Q+T  +E     ++  +   + E++
Sbjct: 431 RDKQKNMNSSDAAYLEDKRKLTKVEGQIGQLERELQSTGYEEGSMETLAGRRQALQQEVR 490

Query: 262 DARKLLDDTSREKAKLE 312
             R  LD  +  + +L+
Sbjct: 491 GLRSELDRRNAHRWELQ 507


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 1.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 106 LQNLNDRLAAYIDKVRQLESENSGLRRE 189
           LQN+  +L   ++++R    EN+ LRRE
Sbjct: 110 LQNIGAQLTTALEELRLCREENAALRRE 137


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 387 LTVLGFLVQALLQIIIFLV 331
           LTV+G+L  AL Q+ +F +
Sbjct: 384 LTVIGYLCYALAQVFLFCI 402


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 387 LTVLGFLVQALLQIIIFLV 331
           LTV+G+L  AL Q+ +F +
Sbjct: 237 LTVIGYLCYALAQVFLFCI 255


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 387 LTVLGFLVQALLQIIIFLV 331
           LTV+G+L  AL Q+ +F +
Sbjct: 384 LTVIGYLCYALAQVFLFCI 402


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,512
Number of Sequences: 2352
Number of extensions: 10129
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184096935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)