Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_D01_e4_07.seq
(1564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical pr... 84 2e-16
X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein. 84 2e-16
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 80 4e-15
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 73 4e-13
U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate fi... 73 4e-13
U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate fi... 73 4e-13
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 67 4e-11
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 65 1e-10
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 63 6e-10
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 63 6e-10
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 60 4e-09
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 60 4e-09
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 60 4e-09
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 49 1e-05
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 49 1e-05
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 49 1e-05
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 48 1e-05
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 48 1e-05
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 42 9e-04
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 42 9e-04
X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic int... 42 0.001
AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate... 42 0.001
U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate fi... 40 0.006
U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate fi... 40 0.006
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 39 0.008
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 37 0.034
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 37 0.034
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 35 0.14
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 35 0.14
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 35 0.14
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 34 0.31
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 33 0.42
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 33 0.42
Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.42
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.42
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.42
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 33 0.55
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 33 0.55
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 33 0.55
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 31 2.9
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 31 2.9
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 5.1
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 29 6.8
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 29 6.8
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 29 6.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 6.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 6.8
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 29 6.8
AC024791-7|AAU20833.1| 278|Caenorhabditis elegans Hypothetical ... 29 6.8
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 29 8.9
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 84.6 bits (200), Expect = 2e-16
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 47 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 105
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A+
Sbjct: 106 NIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRAK 163
Query: 409 HYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 164 IDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDY 223
Query: 583 ENTVXSLREE 612
+N V +L EE
Sbjct: 224 QNQVQTLLEE 233
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 84.6 bits (200), Expect = 2e-16
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 55 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 113
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A+
Sbjct: 114 NIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRAK 171
Query: 409 HYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 172 IDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDY 231
Query: 583 ENTVXSLREE 612
+N V +L EE
Sbjct: 232 QNQVQTLLEE 241
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 84.6 bits (200), Expect = 2e-16
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 55 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 113
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A+
Sbjct: 114 NIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRAK 171
Query: 409 HYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 172 IDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDY 231
Query: 583 ENTVXSLREE 612
+N V +L EE
Sbjct: 232 QNQVQTLLEE 241
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 84.6 bits (200), Expect = 2e-16
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 47 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 105
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A+
Sbjct: 106 NIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRAK 163
Query: 409 HYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 164 IDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDY 223
Query: 583 ENTVXSLREE 612
+N V +L EE
Sbjct: 224 QNQVQTLLEE 233
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 84.6 bits (200), Expect = 2e-16
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 55 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 113
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A+
Sbjct: 114 NIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRAK 171
Query: 409 HYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 172 IDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDY 231
Query: 583 ENTVXSLREE 612
+N V +L EE
Sbjct: 232 QNQVQTLLEE 241
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 84.6 bits (200), Expect = 2e-16
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 55 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 113
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A+
Sbjct: 114 NIRNMYEGELVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRAK 171
Query: 409 HYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 172 IDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDY 231
Query: 583 ENTVXSLREE 612
+N V +L EE
Sbjct: 232 QNQVQTLLEE 241
>Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical
protein DY3.2 protein.
Length = 566
Score = 84.2 bits (199), Expect = 2e-16
Identities = 59/187 (31%), Positives = 84/187 (44%)
Frame = +1
Query: 52 NSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSN 231
+S L +T+ + KD L +LN RLA YIDKVRQLE EN+ L+ +I+ + V +E SN
Sbjct: 31 DSFGSTLLETSRLQEKDHLTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSN 90
Query: 232 IKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARH 411
+ +E E R+ LD E AK I+ E AE A H
Sbjct: 91 LADRFEAEKARLRRALDSAQDELAKYRIEYDAAKVEVKKLKPQVEKLERELAGAEEQALH 150
Query: 412 YETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENT 591
++ + K T A K E DL K+ LR + +E+E L R N
Sbjct: 151 AQSIADQSQAKQKTLQARNDKLVVENDDLKKQNITLRDTVEGLKKAVEDETLLRTAANNK 210
Query: 592 VXSLREE 612
+ +L E+
Sbjct: 211 IKALEED 217
>X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein.
Length = 566
Score = 84.2 bits (199), Expect = 2e-16
Identities = 59/187 (31%), Positives = 84/187 (44%)
Frame = +1
Query: 52 NSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSN 231
+S L +T+ + KD L +LN RLA YIDKVRQLE EN+ L+ +I+ + V +E SN
Sbjct: 31 DSFGSTLLETSRLQEKDHLTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSN 90
Query: 232 IKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARH 411
+ +E E R+ LD E AK I+ E AE A H
Sbjct: 91 LADRFEAEKARLRRALDSAQDELAKYRIEYDAAKVEVKKLKPQVEKLERELAGAEEQALH 150
Query: 412 YETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENT 591
++ + K T A K E DL K+ LR + +E+E L R N
Sbjct: 151 AQSIADQSQAKQKTLQARNDKLVVENDDLKKQNITLRDTVEGLKKAVEDETLLRTAANNK 210
Query: 592 VXSLREE 612
+ +L E+
Sbjct: 211 IKALEED 217
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 80.2 bits (189), Expect = 4e-15
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D+ + K+ + +LNDRLA+YI+KVR LE++N L ++ + ++
Sbjct: 73 GQNAASTIRDSREREKKE-MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTH 131
Query: 229 NIKGIYEHEL-QDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLA 405
NI+ +YE EL DA+KL+D+T++++ +E LK++ E +Q + A
Sbjct: 132 NIRNMYEGELVVDAQKLIDETNKQRKDMEGQLKKMQDELAEMRRKLEDATKGREQ--DRA 189
Query: 406 RHYETRFTEESNKYNTALADKKKAQ--DEARDLAKELEKLRKVYADTRXTLEEEMLCRIX 579
+ T + + +L ++ AQ DE + + +E ++L R L++E L RI
Sbjct: 190 KIDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRID 249
Query: 580 MENTVXSLREE 612
+N V +L EE
Sbjct: 250 YQNQVQTLLEE 260
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 73.3 bits (172), Expect = 4e-13
Identities = 49/192 (25%), Positives = 86/192 (44%)
Frame = +1
Query: 37 PLAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT 216
P + N+ L+ T K K LQ LNDRL YID+V++LE +N L ++ +
Sbjct: 33 PALSANAAKSFLEATD--KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWG 90
Query: 217 REVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAE 396
++ S IK Y L ARK +DD +R KA++++ + R + +
Sbjct: 91 KDTSEIKIKYSESLSTARKDIDDAARRKAEVDVKVARHRDDLAEYRSRYEDIQQRRESDR 150
Query: 397 NLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRI 576
+ + ++ A K+ DE + + + ++ + R L++E + RI
Sbjct: 151 EKISQWTNAIADAQSEVEMLRARFKQLTDEEKRVTADNSRIWEELQKARSDLDDETIGRI 210
Query: 577 XMENTVXSLREE 612
+N V +L EE
Sbjct: 211 DFQNQVQTLMEE 222
>U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate
filament, b protein1, isoform a protein.
Length = 558
Score = 73.3 bits (172), Expect = 4e-13
Identities = 49/192 (25%), Positives = 86/192 (44%)
Frame = +1
Query: 37 PLAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT 216
P + N+ L+ T K K LQ LNDRL YID+V++LE +N L ++ +
Sbjct: 33 PALSANAAKSFLEATD--KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWG 90
Query: 217 REVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAE 396
++ S IK Y L ARK +DD +R KA++++ + R + +
Sbjct: 91 KDTSEIKIKYSESLSTARKDIDDAARRKAEVDVKVARHRDDLAEYRSRYEDIQQRRESDR 150
Query: 397 NLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRI 576
+ + ++ A K+ DE + + + ++ + R L++E + RI
Sbjct: 151 EKISQWTNAIADAQSEVEMLRARFKQLTDEEKRVTADNSRIWEELQKARSDLDDETIGRI 210
Query: 577 XMENTVXSLREE 612
+N V +L EE
Sbjct: 211 DFQNQVQTLMEE 222
>U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate
filament, b protein1, isoform b protein.
Length = 589
Score = 73.3 bits (172), Expect = 4e-13
Identities = 49/192 (25%), Positives = 86/192 (44%)
Frame = +1
Query: 37 PLAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT 216
P + N+ L+ T K K LQ LNDRL YID+V++LE +N L ++ +
Sbjct: 64 PALSANAAKSFLEATD--KEKKTLQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWG 121
Query: 217 REVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAE 396
++ S IK Y L ARK +DD +R KA++++ + R + +
Sbjct: 122 KDTSEIKIKYSESLSTARKDIDDAARRKAEVDVKVARHRDDLAEYRSRYEDIQQRRESDR 181
Query: 397 NLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRI 576
+ + ++ A K+ DE + + + ++ + R L++E + RI
Sbjct: 182 EKISQWTNAIADAQSEVEMLRARFKQLTDEEKRVTADNSRIWEELQKARSDLDDETIGRI 241
Query: 577 XMENTVXSLREE 612
+N V +L EE
Sbjct: 242 DFQNQVQTLMEE 253
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 66.9 bits (156), Expect = 4e-11
Identities = 44/172 (25%), Positives = 79/172 (45%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + LNDRLA+YI+KVR LE++N + +++ + + +++K +YE EL+ A+ L
Sbjct: 71 KKEMSELNDRLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDL 130
Query: 277 LDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTA 456
+ D+ +E+A+LE +K+L E + R +
Sbjct: 131 IADSDKERAQLEDQIKKLVEELNNYRNKLHEAERGADVTRKELDNVLGRLGALEAEIELL 190
Query: 457 LADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLREE 612
++ L +E ++ R +E+E L RI +N V +L EE
Sbjct: 191 KRRISLMEESIGHLKRENHRMIDSLHHARNAVEQETLNRIDYQNQVQTLLEE 242
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 65.3 bits (152), Expect = 1e-10
Identities = 30/81 (37%), Positives = 54/81 (66%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + LNDRLA+YI+KVR LE++N + +++ + + +++K +YE EL+ A+ L
Sbjct: 52 KKEMSELNDRLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDL 111
Query: 277 LDDTSREKAKLEIDLKRLYXE 339
+ D+ +E+A+LE +K+L E
Sbjct: 112 IADSDKERAQLEDQIKKLVEE 132
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 62.9 bits (146), Expect = 6e-10
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D + K+ ++ LNDRLA+YI+KVR L+++N L +++ Q +
Sbjct: 57 GQNAASTIRDNREREKKEIME-LNDRLASYIEKVRFLDAQNRKLDADLKMLQGRFGKSTG 115
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
++K +YE E+ A ++ T ++ + E ++++L ++ +AE+ +
Sbjct: 116 SVKVMYEMEITTATNVVKQTGKDHGETEKEIRKL--QDQLDELRKKFEEAQRGRAEDRLK 173
Query: 409 HYETRFTEESNKYNTALADKKKA--QDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
+ T + + L ++ A ++E L KE +L R L++E L RI
Sbjct: 174 IDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQETLLRIDN 233
Query: 583 ENTVXSLREE 612
+N V ++ EE
Sbjct: 234 QNKVKTILEE 243
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 62.9 bits (146), Expect = 6e-10
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Frame = +1
Query: 49 GNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVS 228
G + A ++D + K+ ++ LNDRLA+YI+KVR L+++N L +++ Q +
Sbjct: 57 GQNAASTIRDNREREKKEIME-LNDRLASYIEKVRFLDAQNRKLDADLKMLQGRFGKSTG 115
Query: 229 NIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLAR 408
++K +YE E+ A ++ T ++ + E ++++L ++ +AE+ +
Sbjct: 116 SVKVMYEMEITTATNVVKQTGKDHGETEKEIRKL--QDQLDELRKKFEEAQRGRAEDRLK 173
Query: 409 HYETRFTEESNKYNTALADKKKA--QDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXM 582
+ T + + L ++ A ++E L KE +L R L++E L RI
Sbjct: 174 IDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQETLLRIDN 233
Query: 583 ENTVXSLREE 612
+N V ++ EE
Sbjct: 234 QNKVKTILEE 243
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 60.1 bits (139), Expect = 4e-09
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + LNDRLA+YI KVR L ++N L ++ Q + ++K +YE E+ A +
Sbjct: 72 KKEITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNV 131
Query: 277 LDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTA 456
+ +T ++ + E ++ ++ ++ +AE+ + E T + +
Sbjct: 132 VKETGKDHEEAEKEIGKI--KDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEIN 189
Query: 457 LADKKKA--QDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLREE 612
L ++ A ++E L KE +L R L++E L RI +N V ++ EE
Sbjct: 190 LLKRRIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEE 243
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 60.1 bits (139), Expect = 4e-09
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + LNDRLA+YI KVR L ++N L ++ Q + ++K +YE E+ A +
Sbjct: 72 KKEITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNV 131
Query: 277 LDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTA 456
+ +T ++ + E ++ ++ ++ +AE+ + E T + +
Sbjct: 132 VKETGKDHEEAEKEIGKI--KDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEIN 189
Query: 457 LADKKKA--QDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLREE 612
L ++ A ++E L KE +L R L++E L RI +N V ++ EE
Sbjct: 190 LLKRRIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEE 243
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 60.1 bits (139), Expect = 4e-09
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + LNDRLA+YI KVR L ++N L ++ Q + ++K +YE E+ A +
Sbjct: 72 KKEITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNV 131
Query: 277 LDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTA 456
+ +T ++ + E ++ ++ ++ +AE+ + E T + +
Sbjct: 132 VKETGKDHEEAEKEIGKI--KDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEIN 189
Query: 457 LADKKKA--QDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLREE 612
L ++ A ++E L KE +L R L++E L RI +N V ++ EE
Sbjct: 190 LLKRRIALLEEEVARLKKENFRLTSELQRVRSELDQETLLRIDNQNKVTTILEE 243
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = +1
Query: 115 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSR 294
LNDRLA YI+KVR LE++N L +I + + ++ G+++ E+ A+ +L+ T+
Sbjct: 58 LNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFSGG-GHVSGLFDAEINQAKHILEQTTA 116
Query: 295 EKAKLEIDLKRLYXE 339
++ E D+ L E
Sbjct: 117 HRSTFERDITGLSAE 131
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = +1
Query: 115 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSR 294
LNDRLA YI+KVR LE++N L +I + + ++ G+++ E+ A+ +L+ T+
Sbjct: 684 LNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFSGG-GHVSGLFDAEINQAKHILEQTTA 742
Query: 295 EKAKLEIDLKRLYXE 339
++ E D+ L E
Sbjct: 743 HRSTFERDITGLSAE 757
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = +1
Query: 115 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSR 294
LNDRLA YI+KVR LE++N L +I + + ++ G+++ E+ A+ +L+ T+
Sbjct: 684 LNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFSGG-GHVSGLFDAEINQAKHILEQTTA 742
Query: 295 EKAKLEIDLKRLYXE 339
++ E D+ L E
Sbjct: 743 HRSTFERDITGLSAE 757
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 48.4 bits (110), Expect = 1e-05
Identities = 31/144 (21%), Positives = 70/144 (48%)
Frame = +1
Query: 106 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDD 285
+++LN + + ++L++EN+ L +E+ Q+V + ++K +L++AR+ L+D
Sbjct: 190 VEDLNKHVNDLAQQRQRLQAENNDLLKEVHD-QKVQLDNLQHVKYTLAQQLEEARRRLED 248
Query: 286 TSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALAD 465
RE+++L+ L ++ E AE+ T T+ +K++ +A
Sbjct: 249 AERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQWKSKFDAEVA- 307
Query: 466 KKKAQDEARDLAKELEKLRKVYAD 537
+E DL K++ + + Y +
Sbjct: 308 --LHHEEVEDLRKKMLQKQAEYEE 329
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 48.4 bits (110), Expect = 1e-05
Identities = 31/144 (21%), Positives = 70/144 (48%)
Frame = +1
Query: 106 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDD 285
+++LN + + ++L++EN+ L +E+ Q+V + ++K +L++AR+ L+D
Sbjct: 190 VEDLNKHVNDLAQQRQRLQAENNDLLKEVHD-QKVQLDNLQHVKYTLAQQLEEARRRLED 248
Query: 286 TSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALAD 465
RE+++L+ L ++ E AE+ T T+ +K++ +A
Sbjct: 249 AERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQWKSKFDAEVA- 307
Query: 466 KKKAQDEARDLAKELEKLRKVYAD 537
+E DL K++ + + Y +
Sbjct: 308 --LHHEEVEDLRKKMLQKQAEYEE 329
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 48.4 bits (110), Expect = 1e-05
Identities = 31/144 (21%), Positives = 70/144 (48%)
Frame = +1
Query: 106 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDD 285
+++LN + + ++L++EN+ L +E+ Q+V + ++K +L++AR+ L+D
Sbjct: 206 VEDLNKHVNDLAQQRQRLQAENNDLLKEVHD-QKVQLDNLQHVKYTLAQQLEEARRRLED 264
Query: 286 TSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALAD 465
RE+++L+ L ++ E AE+ T T+ +K++ +A
Sbjct: 265 AERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQWKSKFDAEVA- 323
Query: 466 KKKAQDEARDLAKELEKLRKVYAD 537
+E DL K++ + + Y +
Sbjct: 324 --LHHEEVEDLRKKMLQKQAEYEE 345
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 42.3 bits (95), Expect = 9e-04
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Frame = +1
Query: 40 LAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT- 216
L A D R L T +FK K A ND LA Y+D R+ EN L +E++ + +
Sbjct: 1480 LDAAQRDNRQLS-TDLFKAKTA----NDELAEYLDSTRR---ENKSLAQEVKDLTDQLGE 1531
Query: 217 --REVSNIKGIY---EHELQDARKLLDDTSREKAKLEIDLKRLYXE-NXXXXXXXXXXXX 378
R V+ ++ I E E ++ +K LD+ E + R E +
Sbjct: 1532 GGRSVAELQKIVRKLEVEKEELQKALDEAEAALEAEEAKVLRAQIEVSQIRSEIEKRIQE 1591
Query: 379 XCQQAENLARHYETRFTE-------ESNKYNTALADKKKAQDEARDLAKELEKLRKVYAD 537
++ EN R+++ E+ + AL KKK + + DL L+ + YAD
Sbjct: 1592 KEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKLESDINDLEIALDHANRAYAD 1651
Query: 538 TRXTLEEEM 564
+ T+++ M
Sbjct: 1652 AQKTIKKYM 1660
Score = 41.5 bits (93), Expect = 0.002
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 6/178 (3%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTRE------VSNIKGIYEHEL 258
+++ + LN+ L + DKV LE + L +++ +E + RE + K E +L
Sbjct: 1013 EESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDL 1072
Query: 259 QDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEES 438
+ A++ +D+ +++K +E LKR + + + L + R E
Sbjct: 1073 KVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAENNSIIAKLQRLIKELTARNAELE 1132
Query: 439 NKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLREE 612
+ ++K+ + +ELE+L + ++ E + LR E
Sbjct: 1133 EELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEANKKREAEIAKLRRE 1190
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 42.3 bits (95), Expect = 9e-04
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Frame = +1
Query: 40 LAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT- 216
L A D R L T +FK K A ND LA Y+D R+ EN L +E++ + +
Sbjct: 1480 LDAAQRDNRQLS-TDLFKAKTA----NDELAEYLDSTRR---ENKSLAQEVKDLTDQLGE 1531
Query: 217 --REVSNIKGIY---EHELQDARKLLDDTSREKAKLEIDLKRLYXE-NXXXXXXXXXXXX 378
R V+ ++ I E E ++ +K LD+ E + R E +
Sbjct: 1532 GGRSVAELQKIVRKLEVEKEELQKALDEAEAALEAEEAKVLRAQIEVSQIRSEIEKRIQE 1591
Query: 379 XCQQAENLARHYETRFTE-------ESNKYNTALADKKKAQDEARDLAKELEKLRKVYAD 537
++ EN R+++ E+ + AL KKK + + DL L+ + YAD
Sbjct: 1592 KEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKLESDINDLEIALDHANRAYAD 1651
Query: 538 TRXTLEEEM 564
+ T+++ M
Sbjct: 1652 AQKTIKKYM 1660
Score = 41.5 bits (93), Expect = 0.002
Identities = 34/178 (19%), Positives = 72/178 (40%), Gaps = 6/178 (3%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTRE------VSNIKGIYEHEL 258
+++ + LN+ L + DKV LE + L +++ +E + RE + K E +L
Sbjct: 1013 EESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDL 1072
Query: 259 QDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEES 438
+ A++ +D+ +++K +E LKR + + + L + R E
Sbjct: 1073 KVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAENNSIIAKLQRLIKELTARNAELE 1132
Query: 439 NKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLREE 612
+ ++K+ + +ELE+L + ++ E + LR E
Sbjct: 1133 EELEAERNSRQKSDRSRSEAERELEELTERLEQQGGATAAQLEANKKREAEIAKLRRE 1190
>X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 500
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/113 (27%), Positives = 55/113 (48%)
Frame = +1
Query: 1 VFGGXPXN*WHXPLAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGL 180
++GG P N +AG ++D A + K + LNDRLA YI+KVR L+++N L
Sbjct: 3 LYGGIPTNLVSGMSSAGAICTTQIRD-AREREKREIGLLNDRLADYIEKVRFLKAQNHVL 61
Query: 181 RREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXE 339
+I+ + + +I +E E+ + + + + K + D+ L E
Sbjct: 62 SHDIEILRRGFSGG-GHISSFFESEISNCTVISERILSSRTKFQADITGLEGE 113
>AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate
filament, c protein 1 protein.
Length = 500
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/113 (27%), Positives = 55/113 (48%)
Frame = +1
Query: 1 VFGGXPXN*WHXPLAAGNSDARVLQDTAVFK*KDALQNLNDRLAAYIDKVRQLESENSGL 180
++GG P N +AG ++D A + K + LNDRLA YI+KVR L+++N L
Sbjct: 3 LYGGIPTNLVSGMSSAGAICTTQIRD-AREREKREIGLLNDRLADYIEKVRFLKAQNHVL 61
Query: 181 RREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXE 339
+I+ + + +I +E E+ + + + + K + D+ L E
Sbjct: 62 SHDIEILRRGFSGG-GHISSFFESEISNCTVISERILSSRTKFQADITGLEGE 113
>U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate
filament, d protein1, isoform b protein.
Length = 465
Score = 39.5 bits (88), Expect = 0.006
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + +LN+RLA Y++KVR LE++N L +I ++ ++ Y+ E L
Sbjct: 54 KREIADLNNRLARYVEKVRFLEAQNRVLENDIGLFRQAAHIHTGKVRDYYDAEKTSLATL 113
Query: 277 LDDTSREKAKLEIDLKRLYXE 339
+ + + + + ++++L E
Sbjct: 114 VREQEAKVSSAKQNIRKLEPE 134
>U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate
filament, d protein1, isoform a protein.
Length = 575
Score = 39.5 bits (88), Expect = 0.006
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + +LN+RLA Y++KVR LE++N L +I ++ ++ Y+ E L
Sbjct: 54 KREIADLNNRLARYVEKVRFLEAQNRVLENDIGLFRQAAHIHTGKVRDYYDAEKTSLATL 113
Query: 277 LDDTSREKAKLEIDLKRLYXE 339
+ + + + + ++++L E
Sbjct: 114 VREQEAKVSSAKQNIRKLEPE 134
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 39.1 bits (87), Expect = 0.008
Identities = 33/166 (19%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Frame = +1
Query: 115 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSR 294
L+ L +K+ L +EN L+ +++ ++ + RE + +LQ L +S
Sbjct: 92 LSTSLKVEQEKLGTLNTENKNLKDTVKSLEKKIIREKDKYRQEIP-KLQATINHLTISSE 150
Query: 295 EKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTAL-ADKK 471
E A L+ +L+ + + L + + ++ K+ + + K
Sbjct: 151 ETAYLKRELQESKNRLKTCEFYKILTVHSSEADKQLGEYLKKNGNLDTEKFFQLMKSTNK 210
Query: 472 KAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLRE 609
D+ R+ AKE+E+L+ + +E+ + ++ TV LRE
Sbjct: 211 DLTDKRREAAKEIEQLKMEVQSLKRAAQEDAAIKKTLKKTVLDLRE 256
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 37.1 bits (82), Expect = 0.034
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKL 276
K + +LN+RLA Y++KVR LE++N L +I + I +E E L
Sbjct: 56 KVEIADLNNRLARYVEKVRFLEAQNRVLENDIGVFRNAAHTHSERIAVYFESEKASLFTL 115
Query: 277 LDDTSREKAKLEIDLKRL 330
+ + + + E ++++L
Sbjct: 116 VRENKAKISTAEQNIRKL 133
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 37.1 bits (82), Expect = 0.034
Identities = 25/124 (20%), Positives = 54/124 (43%)
Frame = +1
Query: 187 EIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXX 366
+++ E +T+E+S+ + + + ++ L T+ E K L+ EN
Sbjct: 282 DLKIKNETLTKELSDKTELVKMKNEELEDLRQTTTASLGDSEQATKYLHEENMKLTRQKA 341
Query: 367 XXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRX 546
+A ++ E + + ALAD +K ++ R++ +EL+ L + A+
Sbjct: 342 DIRCELLEARRKVEGFDKLKQELEKERDDALADVQKIREVKRNVERELQSLTSLMAERDE 401
Query: 547 TLEE 558
+EE
Sbjct: 402 QIEE 405
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 35.1 bits (77), Expect = 0.14
Identities = 28/149 (18%), Positives = 62/149 (41%), Gaps = 6/149 (4%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTRE------VSNIKGIYEHEL 258
++ ++L+ RL +++ +QL + L + + + +E + E +L
Sbjct: 1015 EERCEDLSSRLIDEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRAAETQL 1074
Query: 259 QDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEES 438
++ ++ + +R+ +L L R E QQ E R + +
Sbjct: 1075 REEQESCLEKTRKAEELTNQLMRKESELSQISIRNDEELAARQQLEREIREIRAQLDDAI 1134
Query: 439 NKYNTALADKKKAQDEARDLAKELEKLRK 525
+ N A ++KA+ RD+A+ELE ++
Sbjct: 1135 EETNKEKAARQKAEKARRDMAEELESYKQ 1163
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 35.1 bits (77), Expect = 0.14
Identities = 28/149 (18%), Positives = 62/149 (41%), Gaps = 6/149 (4%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTRE------VSNIKGIYEHEL 258
++ ++L+ RL +++ +QL + L + + + +E + E +L
Sbjct: 1015 EERCEDLSSRLIDEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRAAETQL 1074
Query: 259 QDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEES 438
++ ++ + +R+ +L L R E QQ E R + +
Sbjct: 1075 REEQESCLEKTRKAEELTNQLMRKESELSQISIRNDEELAARQQLEREIREIRAQLDDAI 1134
Query: 439 NKYNTALADKKKAQDEARDLAKELEKLRK 525
+ N A ++KA+ RD+A+ELE ++
Sbjct: 1135 EETNKEKAARQKAEKARRDMAEELESYKQ 1163
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 35.1 bits (77), Expect = 0.14
Identities = 28/149 (18%), Positives = 62/149 (41%), Gaps = 6/149 (4%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTRE------VSNIKGIYEHEL 258
++ ++L+ RL +++ +QL + L + + + +E + E +L
Sbjct: 1015 EERCEDLSSRLIDEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRAAETQL 1074
Query: 259 QDARKLLDDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYETRFTEES 438
++ ++ + +R+ +L L R E QQ E R + +
Sbjct: 1075 REEQESCLEKTRKAEELTNQLMRKESELSQISIRNDEELAARQQLEREIREIRAQLDDAI 1134
Query: 439 NKYNTALADKKKAQDEARDLAKELEKLRK 525
+ N A ++KA+ RD+A+ELE ++
Sbjct: 1135 EETNKEQAARQKAEKARRDMAEELESYKQ 1163
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 33.9 bits (74), Expect = 0.31
Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 13/180 (7%)
Frame = +1
Query: 40 LAAGNSDARVLQDTAVFK*KDALQNLN----DRLAAYIDKVRQLESENSGLRREIQTTQE 207
LA + R L D + + +D L +LN + A+ + R+L + ++ + QE
Sbjct: 1267 LAESDEHKRTLIDQ-LERSRDELDHLNRVREEEEHAFANMQRRLATAEGQIQELNEQIQE 1325
Query: 208 VVTREVSNIKGIYEHELQDARKLLDDTSREKAKLEIDL-KRLYXENXXXXXXXXXXXXXC 384
+++NI +L+D + L D E L L K ++
Sbjct: 1326 ETRLKIANINRA--RQLEDEKNALLDEKEEAEGLRAHLEKEIHAARQGAGEARRKAEESV 1383
Query: 385 -QQAENLAR-------HYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADT 540
QQ E L + H + + E L KKK Q E D + ELE +R + D+
Sbjct: 1384 NQQLEELRKKNLRDVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDS 1443
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 617 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 676
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 677 TRLREKEAEFE 687
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 386 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 445
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 446 TRLREKEAEFE 456
>Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 202 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 261
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 262 TRLREKEAEFE 272
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 384 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 443
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 444 TRLREKEAEFE 454
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 442 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 501
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 502 TRLREKEAEFE 512
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 33.5 bits (73), Expect = 0.42
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +1
Query: 385 QQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEM 564
++ L + E EES K L K++ ++EAR + +E EK RK+ + +EE
Sbjct: 501 EETLKLEKRIEEVSIEESKKKQEKLELKQREEEEAR-IKEEEEKQRKILEEEARKKQEEE 559
Query: 565 LCRIXMENTVXSLREE 612
R+ E + EE
Sbjct: 560 EARLKAEEELKIYEEE 575
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 617 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 676
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 677 TRLREKEAEFE 687
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 386 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 445
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 446 TRLREKEAEFE 456
>Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 202 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 261
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 262 TRLREKEAEFE 272
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 384 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 443
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 444 TRLREKEAEFE 454
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 442 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 501
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 502 TRLREKEAEFE 512
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 33.5 bits (73), Expect = 0.42
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG-IY--EHELQDARKLL 279
+ D L +DK++QLE+E R +Q +E ++ I+ E ELQ++R LL
Sbjct: 242 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESRTLL 301
Query: 280 DDTSREKAKLE 312
++A+ E
Sbjct: 302 TRLREKEAEFE 312
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.42
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +1
Query: 100 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLL 279
+ L N +L D ++ +SE RR++ +++ I+ ++ L
Sbjct: 1155 ERLDEQNKQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTL 1214
Query: 280 DDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYE-------TRFTEES 438
D + KAK+E + L E + E LA+ YE + E+S
Sbjct: 1215 DALQKSKAKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDEQS 1274
Query: 439 NKYNTALADKKKAQDEARDLAKELEKL 519
+ + K + ++ DLA+++E+L
Sbjct: 1275 RQIGEYTSTKGRLSNDNSDLARQVEEL 1301
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.42
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +1
Query: 100 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLL 279
+ L N +L D ++ +SE RR++ +++ I+ ++ L
Sbjct: 1155 ERLDEQNKQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTL 1214
Query: 280 DDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYE-------TRFTEES 438
D + KAK+E + L E + E LA+ YE + E+S
Sbjct: 1215 DALQKSKAKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDEQS 1274
Query: 439 NKYNTALADKKKAQDEARDLAKELEKL 519
+ + K + ++ DLA+++E+L
Sbjct: 1275 RQIGEYTSTKGRLSNDNSDLARQVEEL 1301
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 33.5 bits (73), Expect = 0.42
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Frame = +1
Query: 100 DALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARKLL 279
+ L N +L D ++ +SE RR++ +++ I+ ++ L
Sbjct: 1155 ERLDEQNKQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNTL 1214
Query: 280 DDTSREKAKLEIDLKRLYXENXXXXXXXXXXXXXCQQAENLARHYE-------TRFTEES 438
D + KAK+E + L E + E LA+ YE + E+S
Sbjct: 1215 DALQKSKAKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDEQS 1274
Query: 439 NKYNTALADKKKAQDEARDLAKELEKL 519
+ + K + ++ DLA+++E+L
Sbjct: 1275 RQIGEYTSTKGRLSNDNSDLARQVEEL 1301
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 33.1 bits (72), Expect = 0.55
Identities = 33/171 (19%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Frame = +1
Query: 103 ALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARK--L 276
+LQNL L DK+ LE + ++++ + R+++ ++ ++ L+ A++ L
Sbjct: 1071 SLQNLERDLKPLEDKIAALEKLAAAVKKDHPEEAAAIERKIAELRALHADLLRRAQEKML 1130
Query: 277 LDDTSREKAKLEIDLKRL--YXENXXXXXXXXXXXXXCQQAEN-LARHYETRFTEESNKY 447
L + ++ K E L+ + + E +AE L +HYE + KY
Sbjct: 1131 LAEQTQGKEMFESALRDMIGWIEKTRKVMMEDVHPVDVAEAEELLKKHYELGEQIKDKKY 1190
Query: 448 NTALADK------------KKAQDEARDLAKELEKLRKVYADTRXTLEEEM 564
+ K +++ ++L E+ LR +Y L++++
Sbjct: 1191 EVEYCQELGRRLLERNPRMSKVEEQLQNLVSEMASLRDLYRRRDTILKQQL 1241
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 33.1 bits (72), Expect = 0.55
Identities = 33/171 (19%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Frame = +1
Query: 103 ALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARK--L 276
+LQNL L DK+ LE + ++++ + R+++ ++ ++ L+ A++ L
Sbjct: 1071 SLQNLERDLKPLEDKIAALEKLAAAVKKDHPEEAAAIERKIAELRALHADLLRRAQEKML 1130
Query: 277 LDDTSREKAKLEIDLKRL--YXENXXXXXXXXXXXXXCQQAEN-LARHYETRFTEESNKY 447
L + ++ K E L+ + + E +AE L +HYE + KY
Sbjct: 1131 LAEQTQGKEMFESALRDMIGWIEKTRKVMMEDVHPVDVAEAEELLKKHYELGEQIKDKKY 1190
Query: 448 NTALADK------------KKAQDEARDLAKELEKLRKVYADTRXTLEEEM 564
+ K +++ ++L E+ LR +Y L++++
Sbjct: 1191 EVEYCQELGRRLLERNPRMSKVEEQLQNLVSEMASLRDLYRRRDTILKQQL 1241
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 33.1 bits (72), Expect = 0.55
Identities = 33/171 (19%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Frame = +1
Query: 103 ALQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARK--L 276
+LQNL L DK+ LE + ++++ + R+++ ++ ++ L+ A++ L
Sbjct: 1071 SLQNLERDLKPLEDKIAALEKLAAAVKKDHPEEAAAIERKIAELRALHADLLRRAQEKML 1130
Query: 277 LDDTSREKAKLEIDLKRL--YXENXXXXXXXXXXXXXCQQAEN-LARHYETRFTEESNKY 447
L + ++ K E L+ + + E +AE L +HYE + KY
Sbjct: 1131 LAEQTQGKEMFESALRDMIGWIEKTRKVMMEDVHPVDVAEAEELLKKHYELGEQIKDKKY 1190
Query: 448 NTALADK------------KKAQDEARDLAKELEKLRKVYADTRXTLEEEM 564
+ K +++ ++L E+ LR +Y L++++
Sbjct: 1191 EVEYCQELGRRLLERNPRMSKVEEQLQNLVSEMASLRDLYRRRDTILKQQL 1241
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 30.7 bits (66), Expect = 2.9
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +1
Query: 184 REIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSR---EKAKLEIDLKRLYXENXXXX 354
+E + E+ E++ + HE ++A KLLD R EK ++E +L+ L +
Sbjct: 52 QEEKPPAEMTEAEIAMLAAKKRHEEEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRR 111
Query: 355 XXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRK 525
Q AE + E R EE D++KA+ +A + K EK+R+
Sbjct: 112 AEREEDER--QFAERRRQDDERRRKEE---------DERKAKADAEKIRKNEEKVRR 157
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 30.7 bits (66), Expect = 2.9
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Frame = +1
Query: 184 REIQTTQEVVTREVSNIKGIYEHELQDARKLLDDTSR---EKAKLEIDLKRLYXENXXXX 354
+E + E+ E++ + HE ++A KLLD R EK ++E +L+ L +
Sbjct: 52 QEEKPPAEMTEAEIAMLAAKKRHEEEEAAKLLDYEQRRVLEKEQIEQELRELKEKQEKRR 111
Query: 355 XXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKELEKLRK 525
Q AE + E R EE D++KA+ +A + K EK+R+
Sbjct: 112 AEREEDER--QFAERRRQDDERRRKEE---------DERKAKADAEKIRKNEEKVRR 157
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 142 DKVRQLESENSGLRREIQTTQEVV 213
D + QLESENS LRRE+ E++
Sbjct: 467 DSILQLESENSRLRREVTEKGELI 490
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/73 (19%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 97 KDALQNLNDRLAAYIDKVRQLESENSGLRREIQT-TQEVVTREVSNIKGIYEHELQDARK 273
K+ LN++ + + K+ ++ SEN L R++Q +E++ ++ +++ + ++ +K
Sbjct: 172 KNKTMKLNEKNSQFQTKLAEISSENRNLERKVQKFREELIVKDQRSLE--VHQDQENTQK 229
Query: 274 LLDDTSREKAKLE 312
+L + + +L+
Sbjct: 230 VLKEVKQLSDRLD 242
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +1
Query: 157 LESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARK--LLDDTSREKAKLEIDLKRL 330
LE EN +++ ++ Q ++ + + + + E K + + E A LE +K+L
Sbjct: 414 LEGENEEMKQLAESIQSMLVERKTAEEAVLQLEADMTIKNSSIKNLQVELATLESTVKQL 473
Query: 331 YXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKEL 510
+ +Q E+ + + + + D K A+D + KE+
Sbjct: 474 ERQKGEATRRLADYDTQIEQLESACKAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEM 533
Query: 511 EKLRK 525
E+L+K
Sbjct: 534 EELKK 538
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +1
Query: 157 LESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARK--LLDDTSREKAKLEIDLKRL 330
LE EN +++ ++ Q ++ + + + + E K + + E A LE +K+L
Sbjct: 414 LEGENEEMKQLAESIQSMLVERKTAEEAVLQLEADMTIKNSSIKNLQVELATLESTVKQL 473
Query: 331 YXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKEL 510
+ +Q E+ + + + + D K A+D + KE+
Sbjct: 474 ERQKGEATRRLADYDTQIEQLESACKAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEM 533
Query: 511 EKLRK 525
E+L+K
Sbjct: 534 EELKK 538
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 427 TEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXS 600
T+E K + +A K K + + + EK++KV D E+E+ ++ +E+ + +
Sbjct: 13213 TDEKLKLDAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEIAT 13270
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 6.8
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 427 TEESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXS 600
T+E K + +A K K + + + EK++KV D E+E+ ++ +E+ + +
Sbjct: 13213 TDEKLKLDAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEIAT 13270
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +1
Query: 157 LESENSGLRREIQTTQEVVTREVSNIKGIYEHELQDARK--LLDDTSREKAKLEIDLKRL 330
LE EN +++ ++ Q ++ + + + + E K + + E A LE +K+L
Sbjct: 459 LEGENEEMKQLAESIQSMLVERKTAEEAVLQLEADMTIKNSSIKNLQVELATLESTVKQL 518
Query: 331 YXENXXXXXXXXXXXXXCQQAENLARHYETRFTEESNKYNTALADKKKAQDEARDLAKEL 510
+ +Q E+ + + + + D K A+D + KE+
Sbjct: 519 ERQKGEATRRLADYDTQIEQLESACKAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEM 578
Query: 511 EKLRK 525
E+L+K
Sbjct: 579 EELKK 583
>AC024791-7|AAU20833.1| 278|Caenorhabditis elegans Hypothetical
protein Y47G6A.15 protein.
Length = 278
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 439 NKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLR 606
++ TA +K+A+D+A+D ELEK + + ++E N + SLR
Sbjct: 135 DEVETANRRQKRAEDDAKDARDELEKEKNANRANKALVDELRNAAAQTTNEMRSLR 190
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 29.1 bits (62), Expect = 8.9
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 430 EESNKYNTALADKKKAQDEARDLAKELEKLRKVYADTRXTLEEEMLCRIXMENTVXSLRE 609
EE+ + LA+ +K Q +DL KE+E+L+ + + +E + + T+ RE
Sbjct: 543 EEARDLDEQLAEVQKQQ--VKDLMKEIEQLKIHIHELNGRIRDEQKHAVDLSQTILKFRE 600
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,438,822
Number of Sequences: 27780
Number of extensions: 238759
Number of successful extensions: 957
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4514820630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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