Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_C12_e91_06.seq
         (1500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.63 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.63 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   2.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   3.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   4.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 409 THPTAGGGPREVRGASR 459
           THP+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 409 THPTAGGGPREVRGASR 459
           THP+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +2

Query: 158 KMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENDLDQTQEGLMQ 337
           KM   K +KD   D+ A+ + + +      EKA+ +   + K   TIEN L         
Sbjct: 70  KMVKQKHKKDIRADKKALQKLRRE-----VEKAKRDLSSVHKTTLTIENLLADYDFSETL 124

Query: 338 VNAKLEE 358
             AK EE
Sbjct: 125 TRAKFEE 131


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 689 PKPVEFXXVGARGXTXVSFGNNL 757
           P+   F  VGA     VSFG NL
Sbjct: 196 PQAPPFATVGANLQATVSFGTNL 218


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 18/67 (26%), Positives = 27/67 (40%)
 Frame = +1

Query: 259 RRGQATPEEDPDY*KRPRPDTRRPYASQCQARREGKGSAER*V*SGCPQPTHPTAGGGPR 438
           R G     E P   +      + P   + +A R G  +  R    GC + +  T  GGPR
Sbjct: 14  RNGGVVSAEHPHQHQHYGAAVQVPQGGRRRAARPGVVTTPR---WGCARASSATTMGGPR 70

Query: 439 EVRGASR 459
             R A++
Sbjct: 71  YGRAAAQ 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,656
Number of Sequences: 336
Number of extensions: 3517
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44964575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)