Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_C07_e51_05.seq
         (1562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   5.9  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
            transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 19/77 (24%), Positives = 22/77 (28%)
 Frame = -2

Query: 1303 SXXXGXATAAXXADPLWPXXAX*XXXGGXGAXEXGXGEVXXPXXAGXGGXPLPLXQIAGG 1124
            +     A AA  A  + P        GG G    G G +      G GG         G 
Sbjct: 633  AAAAAAAVAAAVAASVSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRS-SSGGGM 691

Query: 1123 XXXXXVRXGXGXXAGKG 1073
                 V  G    AG G
Sbjct: 692  IGMHSVAAGAAVAAGGG 708


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,015,590
Number of Sequences: 2352
Number of extensions: 15492
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184096935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)