Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_C07_e51_05.seq
(1562 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 36 0.40
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 36 0.40
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 36 0.40
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 36 0.40
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 36 0.40
Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein. 33 2.8
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 33 2.8
X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein. 33 2.8
S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein. 33 2.8
M77663-1|AAA59199.1| 384|Homo sapiens keratin 10 protein. 33 2.8
BC121170-1|AAI21171.1| 467|Homo sapiens KRT9 protein protein. 33 2.8
BC034697-1|AAH34697.1| 584|Homo sapiens keratin 10 (epidermolyt... 33 2.8
U29727-1|AAA82933.1| 816|Homo sapiens BMK1 gamma kinase protein. 32 4.9
U29726-1|AAA82932.1| 816|Homo sapiens BMK1 beta kinase protein. 32 4.9
U29725-1|AAA82931.1| 816|Homo sapiens BMK1 alpha kinase protein. 32 4.9
U25278-1|AAA81381.1| 815|Homo sapiens ERK5 protein. 32 4.9
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 32 4.9
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 32 4.9
J04029-1|AAA60544.1| 561|Homo sapiens keratin 10 protein. 32 4.9
BC030134-1|AAH30134.1| 816|Homo sapiens mitogen-activated prote... 32 4.9
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 32 4.9
BC009963-1|AAH09963.1| 816|Homo sapiens mitogen-activated prote... 32 4.9
BC007992-1|AAH07992.1| 677|Homo sapiens mitogen-activated prote... 32 4.9
BC007404-1|AAH07404.1| 677|Homo sapiens mitogen-activated prote... 32 4.9
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 32 4.9
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 4.9
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 4.9
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 4.9
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 32 4.9
X14487-1|CAA32649.1| 593|Homo sapiens protein ( Human gene for ... 31 8.6
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing factor
protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.40
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 1026 PXXGGXXPGXVRGXGAPXPAXXPXPXLTXXXXXPPAIXSRGRGXPP-XPAXXGXXTSPXP 1202
P P GAP P P P T PPA+ S G PP P G T+P P
Sbjct: 126 PASSSAPPATPPTSGAP-PGSGPGPTPTP----PPAVTSAPPGAPPPTPPSSGVPTTP-P 179
Query: 1203 XSXAPXPP 1226
+ P PP
Sbjct: 180 QAGGPPPP 187
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.40
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 1026 PXXGGXXPGXVRGXGAPXPAXXPXPXLTXXXXXPPAIXSRGRGXPP-XPAXXGXXTSPXP 1202
P P GAP P P P T PPA+ S G PP P G T+P P
Sbjct: 126 PASSSAPPATPPTSGAP-PGSGPGPTPTP----PPAVTSAPPGAPPPTPPSSGVPTTP-P 179
Query: 1203 XSXAPXPP 1226
+ P PP
Sbjct: 180 QAGGPPPP 187
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 35.9 bits (79), Expect = 0.40
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 1026 PXXGGXXPGXVRGXGAPXPAXXPXPXLTXXXXXPPAIXSRGRGXPP-XPAXXGXXTSPXP 1202
P P GAP P P P T PPA+ S G PP P G T+P P
Sbjct: 126 PASSSAPPATPPTSGAP-PGSGPGPTPTP----PPAVTSAPPGAPPPTPPSSGVPTTP-P 179
Query: 1203 XSXAPXPP 1226
+ P PP
Sbjct: 180 QAGGPPPP 187
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 35.9 bits (79), Expect = 0.40
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 1026 PXXGGXXPGXVRGXGAPXPAXXPXPXLTXXXXXPPAIXSRGRGXPP-XPAXXGXXTSPXP 1202
P P GAP P P P T PPA+ S G PP P G T+P P
Sbjct: 53 PASSSAPPATPPTSGAP-PGSGPGPTPTP----PPAVTSAPPGAPPPTPPSSGVPTTP-P 106
Query: 1203 XSXAPXPP 1226
+ P PP
Sbjct: 107 QAGGPPPP 114
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.9 bits (79), Expect = 0.40
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 1026 PXXGGXXPGXVRGXGAPXPAXXPXPXLTXXXXXPPAIXSRGRGXPP-XPAXXGXXTSPXP 1202
P P GAP P P P T PPA+ S G PP P G T+P P
Sbjct: 126 PASSSAPPATPPTSGAP-PGSGPGPTPTP----PPAVTSAPPGAPPPTPPSSGVPTTP-P 179
Query: 1203 XSXAPXPP 1226
+ P PP
Sbjct: 180 QAGGPPPP 187
>Z29074-1|CAA82315.1| 623|Homo sapiens cytokeratin 9 protein.
Length = 623
Score = 33.1 bits (72), Expect = 2.8
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG G G G G G G SG G G G
Sbjct: 514 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYG 573
Query: 1199 XXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
G + G S G SGG G + G GG
Sbjct: 574 GGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 616
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 33.1 bits (72), Expect = 2.8
Identities = 35/120 (29%), Positives = 36/120 (30%), Gaps = 6/120 (5%)
Frame = +1
Query: 994 APRGSXPXXAPPXXGAXXRAXSGAGGPPX-XPXXXXRXLLPXXXXPPLFX----PGGEXX 1158
AP P AP A RA G GGP P R L+P PP P G
Sbjct: 77 APAEGAPGAAPEPPPAG-RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAG 135
Query: 1159 PRAXXXXXXPPXXNXSRXPPXPRXXLXP-XLXAXXGPLXXLRSPXPXXGSGXXPXXPXXP 1335
A P P P L A GP P P G G P P P
Sbjct: 136 ACAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP-----GPGPGPGPGPGPGKPAGP 190
>X75015-1|CAA52924.1| 622|Homo sapiens keratin 9 protein.
Length = 622
Score = 33.1 bits (72), Expect = 2.8
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG G G G G G G SG G G G
Sbjct: 513 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYG 572
Query: 1199 XXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
G + G S G SGG G + G GG
Sbjct: 573 GGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 615
>S69510-1|AAC60619.1| 622|Homo sapiens cytokeratin 9 protein.
Length = 622
Score = 33.1 bits (72), Expect = 2.8
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG G G G G G G SG G G G
Sbjct: 513 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYG 572
Query: 1199 XXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
G + G S G SGG G + G GG
Sbjct: 573 GGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 615
>M77663-1|AAA59199.1| 384|Homo sapiens keratin 10 protein.
Length = 384
Score = 33.1 bits (72), Expect = 2.8
Identities = 25/104 (24%), Positives = 26/104 (25%), Gaps = 2/104 (1%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG GG G G G G S G G G GG
Sbjct: 269 GGGSFGGGYGGGSSGGGSSGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG 328
Query: 1199 XXXGGXXXXXXA--RGXXSPPGXNSGGXXXXGSKXRXXXXGXXG 1074
GG G S G +SGG GS G
Sbjct: 329 GYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSG 372
>BC121170-1|AAI21171.1| 467|Homo sapiens KRT9 protein protein.
Length = 467
Score = 33.1 bits (72), Expect = 2.8
Identities = 24/103 (23%), Positives = 26/103 (25%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG G G G G G G SG G G G
Sbjct: 358 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYG 417
Query: 1199 XXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
G + G S G SGG G + G GG
Sbjct: 418 GGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 460
>BC034697-1|AAH34697.1| 584|Homo sapiens keratin 10 (epidermolytic
hyperkeratosis; keratosis palmaris et plantaris) protein.
Length = 584
Score = 33.1 bits (72), Expect = 2.8
Identities = 27/104 (25%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG + GG G G G G G G S G G G GG
Sbjct: 475 GGSSGGGSSGGGYGGGHGGSSGG------GYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG 528
Query: 1199 XXXGGXXXXXXA--RGXXSPPGXNSGGXXXXGSKXRXXXXGXXG 1074
GG G S G +SGG GS G
Sbjct: 529 GYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSG 572
>U29727-1|AAA82933.1| 816|Homo sapiens BMK1 gamma kinase protein.
Length = 816
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 636
>U29726-1|AAA82932.1| 816|Homo sapiens BMK1 beta kinase protein.
Length = 816
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 636
>U29725-1|AAA82931.1| 816|Homo sapiens BMK1 alpha kinase protein.
Length = 816
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 636
>U25278-1|AAA81381.1| 815|Homo sapiens ERK5 protein.
Length = 815
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 587 APAPAPTPTPTPVQPTSPPPGPLAQPTG--PQPQSAGSTSGPVPQPACPPP 635
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 32.3 bits (70), Expect = 4.9
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 1186 PPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPXXPXXPXPXPPXXAGX 1365
PP PP P P GPL P P G+G P P P P PP +G
Sbjct: 359 PPPPGRGGPPPPP-----PPATGRSGPL-----PPPPPGAGGPPMPPPPPPPPPPPSSGN 408
Query: 1366 XXXPP 1380
PP
Sbjct: 409 GPAPP 413
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 32.3 bits (70), Expect = 4.9
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 1186 PPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPXXPXXPXPXPPXXAGX 1365
PP PP P P GPL P P G+G P P P P PP +G
Sbjct: 359 PPPPGRGGPPPPP-----PPATGRSGPL-----PPPPPGAGGPPMPPPPPPPPPPPSSGN 408
Query: 1366 XXXPP 1380
PP
Sbjct: 409 GPAPP 413
>J04029-1|AAA60544.1| 561|Homo sapiens keratin 10 protein.
Length = 561
Score = 32.3 bits (70), Expect = 4.9
Identities = 25/93 (26%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG + GG G G G G G G S G + G G GG
Sbjct: 454 GGGRGGGSFGGGYGGGSSG--GGSSGGGYGGGSSSGGHGGSSSGGYGGGSFGGGGGGYGG 511
Query: 1199 XXXGGXXXXXXARGXXSPPGXN-SGGXXXXGSK 1104
GG G S G GG G K
Sbjct: 512 GSSGGGSSSGGGYGGGSSSGGGYGGGSSSGGHK 544
>BC030134-1|AAH30134.1| 816|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 816
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 636
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 32.3 bits (70), Expect = 4.9
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 1186 PPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPXXPXXPXPXPPXXAGX 1365
PP PP P P GPL P P G+G P P P P PP +G
Sbjct: 359 PPPPGRGGPPPPP-----PPATGRSGPL-----PPPPPGAGGPPMPPPPPPPPPPPSSGN 408
Query: 1366 XXXPP 1380
PP
Sbjct: 409 GPAPP 413
>BC009963-1|AAH09963.1| 816|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 816
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 636
>BC007992-1|AAH07992.1| 677|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 677
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 449 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 497
>BC007404-1|AAH07404.1| 677|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 677
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXP 1223
AP PA P P PP ++ G P P G + P P P P
Sbjct: 449 APAPAPTPTPTPVQPTSPPPGPVAQPTG--PQPQSAGSTSGPVPQPACPPP 497
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 32.3 bits (70), Expect = 4.9
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 1186 PPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPXXPXXPXPXPPXXAGX 1365
PP PP P P GPL P P G+G P P P P PP +G
Sbjct: 371 PPPPGRGGPPPPP-----PPATGRSGPL-----PPPPPGAGGPPMPPPPPPPPPPPSSGN 420
Query: 1366 XXXPP 1380
PP
Sbjct: 421 GPAPP 425
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 4.9
Identities = 35/120 (29%), Positives = 36/120 (30%), Gaps = 6/120 (5%)
Frame = +1
Query: 994 APRGSXPXXAPPXXGAXXRAXSGAGGPPX-XPXXXXRXLLPXXXXPPLFX----PGGEXX 1158
AP P AP A RA G GGP P R L+P PP P G
Sbjct: 77 APAEGAPGAAPEPPPAG-RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAG 135
Query: 1159 PRAXXXXXXPPXXNXSRXPPXPRXXLXP-XLXAXXGPLXXLRSPXPXXGSGXXPXXPXXP 1335
A P P P L A GP P P G G P P P
Sbjct: 136 SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP---GPGPGPGPGPGPGPGKPAGP 192
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 4.9
Identities = 35/120 (29%), Positives = 36/120 (30%), Gaps = 6/120 (5%)
Frame = +1
Query: 994 APRGSXPXXAPPXXGAXXRAXSGAGGPPX-XPXXXXRXLLPXXXXPPLFX----PGGEXX 1158
AP P AP A RA G GGP P R L+P PP P G
Sbjct: 77 APAEGAPGAAPEPPPAG-RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAG 135
Query: 1159 PRAXXXXXXPPXXNXSRXPPXPRXXLXP-XLXAXXGPLXXLRSPXPXXGSGXXPXXPXXP 1335
A P P P L A GP P P G G P P P
Sbjct: 136 SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP---GPGPGPGPGPGPGPGKPAGP 192
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 32.3 bits (70), Expect = 4.9
Identities = 35/120 (29%), Positives = 36/120 (30%), Gaps = 6/120 (5%)
Frame = +1
Query: 994 APRGSXPXXAPPXXGAXXRAXSGAGGPPX-XPXXXXRXLLPXXXXPPLFX----PGGEXX 1158
AP P AP A RA G GGP P R L+P PP P G
Sbjct: 77 APAEGAPGAAPEPPPAG-RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAG 135
Query: 1159 PRAXXXXXXPPXXNXSRXPPXPRXXLXP-XLXAXXGPLXXLRSPXPXXGSGXXPXXPXXP 1335
A P P P L A GP P P G G P P P
Sbjct: 136 SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGP---GPGPGPGPGPGPGPGKPAGP 192
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 32.3 bits (70), Expect = 4.9
Identities = 22/65 (33%), Positives = 24/65 (36%)
Frame = +1
Query: 1186 PPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPXXPXXPXPXPPXXAGX 1365
PP PP P P GPL P P G+G P P P P PP +G
Sbjct: 359 PPPPGRGGPPPPP-----PPATGRSGPL-----PPPPPGAGGPPMPPPPPPPPPPPSSGN 408
Query: 1366 XXXPP 1380
PP
Sbjct: 409 GPAPP 413
>X14487-1|CAA32649.1| 593|Homo sapiens protein ( Human gene for
acidic (type I) cytokeratin 10. ).
Length = 593
Score = 31.5 bits (68), Expect = 8.6
Identities = 29/132 (21%), Positives = 32/132 (24%), Gaps = 3/132 (2%)
Frame = -1
Query: 1385 RSGGXXXXPAXXGGXGXGXXG---XXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXG 1215
R GG G G G G G G G S G G G G
Sbjct: 464 RGGGSFGGGYGGGSSGGGSSGGGYGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHG 523
Query: 1214 GXRXWXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAP 1035
G GG G G GG G G GG + + +
Sbjct: 524 GGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGG---SSSGGGYGGGSSSGGHKSSSS 580
Query: 1034 XXGGAXXGFEPR 999
G PR
Sbjct: 581 GSVGESSSKGPR 592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,132,660
Number of Sequences: 237096
Number of extensions: 2886252
Number of successful extensions: 14464
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14041
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23247688188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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