Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_C07_e51_05.seq
(1562 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01985.1 68417.m00265 expressed protein 41 0.003
At5g46730.1 68418.m05757 glycine-rich protein 38 0.024
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 32 0.89
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 32 1.2
At3g24550.1 68416.m03083 protein kinase family protein contains ... 31 1.6
At1g62240.1 68414.m07021 expressed protein 31 1.6
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 31 2.1
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 31 2.7
At5g33390.1 68418.m03985 glycine-rich protein similar to nuclear... 30 4.8
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 6.3
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 29 8.3
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 40.7 bits (91), Expect = 0.003
Identities = 42/159 (26%), Positives = 43/159 (27%), Gaps = 3/159 (1%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG A GG G G G G G G G A G G GG
Sbjct: 94 GGGASGGAGGGGKGRGRKGGGGAGGGVGGGVGAGGGAGGSVGA---GGGIGGGAGGAIGG 150
Query: 1199 XXXGGXXXXXXARGXXSPPGXN---SGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXX 1029
GG RG S G GG G G G
Sbjct: 151 GASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGRGS 210
Query: 1028 GGAXXGFEPRGAXXKXXXXASSXQGVXPXAFXKXGNSXG 912
GGA G GA + AS GV A G S G
Sbjct: 211 GGASGGGGTVGAGGRGSGGASGGVGVGGGAGGSGGGSVG 249
Score = 36.7 bits (81), Expect = 0.042
Identities = 30/129 (23%), Positives = 32/129 (24%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG GG G G G G G G + G G GG
Sbjct: 128 GGAGGSVGAGGGIGGGAGGAIGGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGG 187
Query: 1199 XXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGGA 1020
G G G SGG G G GG A GG
Sbjct: 188 SVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRG-SGGASGGVGVGGGAGGSGGG 246
Query: 1019 XXGFEPRGA 993
G RG+
Sbjct: 247 SVGGGGRGS 255
Score = 35.5 bits (78), Expect = 0.096
Identities = 31/128 (24%), Positives = 34/128 (26%), Gaps = 3/128 (2%)
Frame = -1
Query: 1385 RSGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRG--XGG 1212
R GG GG G G G G G G + RG GG
Sbjct: 110 RKGGGGAGGGVGGGVGAGGGAGGSVGAGGGIGGGAGGAIGGGASGGVGGGGKGRGGKSGG 169
Query: 1211 XRXWXXXGGXXXXXXARGX-XSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAP 1035
GG A G + G SGG G+ R GG R
Sbjct: 170 GAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGG 229
Query: 1034 XXGGAXXG 1011
GG G
Sbjct: 230 ASGGVGVG 237
Score = 33.9 bits (74), Expect = 0.29
Identities = 30/124 (24%), Positives = 32/124 (25%)
Frame = -1
Query: 1382 SGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRX 1203
SGG GG G G G G G G A G + R GG
Sbjct: 58 SGGIGVGGGGGGGGGIGGSGGVGAGGGVGGGAGGAIGGGASGGAGGGGKGRGRKGGGGAG 117
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGG 1023
GG A G G GG G G GG + GG
Sbjct: 118 GGVGGGVGAGGGAGGSVGAGGGIGGG---AGGAIGGGASGGVGGGGKGRGGKSGGGAGGG 174
Query: 1022 AXXG 1011
G
Sbjct: 175 VGGG 178
Score = 32.3 bits (70), Expect = 0.89
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = -1
Query: 1349 GGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXWXXXGGXXXXX 1170
GG G G G G G G R G G RG GG GG
Sbjct: 490 GGIGGGAGGGVGGGVGGGVGGGVRGAVGGAVGGGVGGAG--RGSGGASGGAGAGGGAGGG 547
Query: 1169 XARGXXSPPGXNSGGXXXXGS 1107
G G +GG G+
Sbjct: 548 VGGGANVGVGVGAGGSTGGGA 568
Score = 31.9 bits (69), Expect = 1.2
Identities = 27/123 (21%), Positives = 28/123 (22%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXW 1200
GG GG G G G G G G G G GG
Sbjct: 183 GGAGGSVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGAGGRGSGGASGGVGVGGGAGG 242
Query: 1199 XXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGGA 1020
G G G +GG G G GG GGA
Sbjct: 243 SGGGSVGGGGRGSGGVGASG-GAGGNVGAGGGLGGGVGGGVGGGVGGSVGGAVGGAVGGA 301
Query: 1019 XXG 1011
G
Sbjct: 302 VGG 304
Score = 30.3 bits (65), Expect = 3.6
Identities = 33/150 (22%), Positives = 37/150 (24%), Gaps = 4/150 (2%)
Frame = -1
Query: 1349 GGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXWXXXGGXXXXX 1170
GG G G G G G G + G G GG G
Sbjct: 83 GGVGGGAGGAIGGGASGGAGGGGKGRGRKGGGGAGGGVGGGVGAGGGAGGSVGAGGGIGG 142
Query: 1169 XARGXXS--PPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGG--AXXGFEP 1002
A G G GG G K G GG + GG G
Sbjct: 143 GAGGAIGGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGGGGT 202
Query: 1001 RGAXXKXXXXASSXQGVXPXAFXKXGNSXG 912
GA + AS G G + G
Sbjct: 203 VGAGGRGSGGASGGGGTVGAGGRGSGGASG 232
Score = 29.1 bits (62), Expect = 8.3
Identities = 25/104 (24%), Positives = 26/104 (25%)
Frame = -1
Query: 1382 SGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRX 1203
+GG GG G G G G G G G GG
Sbjct: 240 AGGSGGGSVGGGGRGSGGVGASGGAGGNVGAGGGLGGGVGGGVGGGVGGSVGGAVGGAVG 299
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
GG G S G SGG S G GG
Sbjct: 300 GAVGGGGGGSVGGGGRGS--GGASGGASGGASGGAGGSVGAGGG 341
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 37.5 bits (83), Expect = 0.024
Identities = 29/124 (23%), Positives = 31/124 (25%), Gaps = 1/124 (0%)
Frame = -1
Query: 1379 GGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXG-GXRX 1203
GG G G G G G G G G A G G G G
Sbjct: 92 GGAASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAGE 151
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGG 1023
G A G G GG G+ G GG + A GG
Sbjct: 152 GGGAGASGYGGGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGG 211
Query: 1022 AXXG 1011
G
Sbjct: 212 GGGG 215
Score = 32.3 bits (70), Expect = 0.89
Identities = 22/92 (23%), Positives = 23/92 (25%)
Frame = -1
Query: 1346 GXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRXWXXXGGXXXXXX 1167
G G G G G SG G G GG + GG
Sbjct: 31 GQASGGGGHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYGGAEGYASGGGSGHGGG 90
Query: 1166 ARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
G S G SG G G GG
Sbjct: 91 GGGAASSGGYASGAGEGGGGGYGGAAGGHAGG 122
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/136 (22%), Positives = 31/136 (22%)
Frame = -1
Query: 1418 AAXXXXXXXXXRSGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXG 1239
AA GG GG G G G G G A G
Sbjct: 94 AASSGGYASGAGEGGGGGYGGAAGGHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAGEGG 153
Query: 1238 XXQXRGXGGXRXWXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAP 1059
G GG GG G S G + G G G GG
Sbjct: 154 GAGASGYGG----GAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGY 209
Query: 1058 DXARXXAPXXGGAXXG 1011
GGA G
Sbjct: 210 GGGGGGGSGGGGAYGG 225
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 32.3 bits (70), Expect = 0.89
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +3
Query: 1026 PXXGGXXPGXVR----GXGAPXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTS 1193
P GG P G P P+ P P +T PP+ + G PP P+ S
Sbjct: 501 PTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPS--PPSTPT-SPGSPPSPS------S 551
Query: 1194 PXPXSXAPXPP 1226
P P S P PP
Sbjct: 552 PTPSSPIPSPP 562
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene for
histone protein GB:X15142 GI:3204 [Physarum polycephalum]
Length = 614
Score = 31.9 bits (69), Expect = 1.2
Identities = 25/157 (15%), Positives = 36/157 (22%), Gaps = 2/157 (1%)
Frame = -1
Query: 1376 GXXXXPAXXGG--XGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRX 1203
G + GG G G G G + G A G G
Sbjct: 199 GSAGGESSMGGDSSSAGAAGESGSAATADSGDAAGADSGGAAGADSGGAASADSGGAAAG 258
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGG 1023
GG + G G ++ G G+ GG + A G
Sbjct: 259 ETASGGAAAADTSGGSAETGGESASGGAASGAGAASGASAKTGGESGEAASGGSAETGGE 318
Query: 1022 AXXGFEPRGAXXKXXXXASSXQGVXPXAFXKXGNSXG 912
+ G + + S G + G
Sbjct: 319 SASAGAASGGSAETGGESGSGGAASGGESASGGATSG 355
Score = 31.5 bits (68), Expect = 1.6
Identities = 28/139 (20%), Positives = 35/139 (25%)
Frame = -1
Query: 1382 SGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRX 1203
SGG G G G G + S A G + G G
Sbjct: 283 SGGAASGAGAASGASAKTGGESGEAAS--GGSAETGGESASAGAASGGSAETGGESGSGG 340
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGG 1023
GG A SP +GG G + G + A + GG
Sbjct: 341 -AASGGESASGGATSGGSP---ETGGSAETGGESASGGAASGGESASGGAASSGSVESGG 396
Query: 1022 AXXGFEPRGAXXKXXXXAS 966
G G+ AS
Sbjct: 397 ESTGATSGGSAETSDESAS 415
Score = 29.1 bits (62), Expect = 8.3
Identities = 31/158 (19%), Positives = 38/158 (24%), Gaps = 1/158 (0%)
Frame = -1
Query: 1382 SGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRX 1203
SGG G G G E G S G GG
Sbjct: 252 SGGAAAGETASG--GAAAADTSGGSAE----TGGESASGGAASGAGAASGASAKTGGESG 305
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGGPPAPDXARXXAPXXGG 1023
GG G + G SGG G + G + +P GG
Sbjct: 306 EAASGGSAETG---GESASAGAASGGSAETGGESGSGGAASGGESASGGATSGGSPETGG 362
Query: 1022 -AXXGFEPRGAXXKXXXXASSXQGVXPXAFXKXGNSXG 912
A G E ++S + G S G
Sbjct: 363 SAETGGESASGGAASGGESASGGAASSGSVESGGESTG 400
>At3g24550.1 68416.m03083 protein kinase family protein contains Pfam
domain PF00069: Protein kinase domain
Length = 652
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/119 (21%), Positives = 31/119 (26%)
Frame = +1
Query: 994 APRGSXPXXAPPXXGAXXRAXSGAGGPPXXPXXXXRXLLPXXXXPPLFXPGGEXXPRAXX 1173
+P + PP + + PP P P PP P
Sbjct: 17 SPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPP 76
Query: 1174 XXXXPPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPXXPXXPXPXPP 1350
P + PP P P P + P P SG P P P PP
Sbjct: 77 LPQPSPSAPITPSPPSPTTPSNP-----RSPPSPNQGP-PNTPSGSTPRTPSNTKPSPP 129
>At1g62240.1 68414.m07021 expressed protein
Length = 227
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/95 (26%), Positives = 25/95 (26%), Gaps = 2/95 (2%)
Frame = -1
Query: 1349 GGXGXGXXGXXGXXPEPXXGXGD-RSXXSGPXXAXXXG-XXQXRGXGGXRXWXXXGGXXX 1176
GG G G G G G G SG G G GG GG
Sbjct: 101 GGGGGGGGGSGGSNGSFFNGSGSGTGYGSGDGRVSSSGEYSASAGGGGSGEGSGGGGGGD 160
Query: 1175 XXXARGXXSPPGXNSGGXXXXGSKXRXXXXGXXGG 1071
G S G SG G G GG
Sbjct: 161 GSSGSGSGSGSGSGSGTGTASGPDVYMHVEGGGGG 195
Score = 31.5 bits (68), Expect = 1.6
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = -1
Query: 1382 SGGXXXXPAXXGGXGXGXXGXXGXXPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGGXRX 1203
S G A GG G G G G G G S SG G G
Sbjct: 136 SSGEYSASAGGGGSGEGSGGGGGGDGSSGSGSGSGS-GSGSGTGTASGPDVYMHVEGGGG 194
Query: 1202 WXXXGGXXXXXXARGXXSPPGXNSGG 1125
GG G S G SGG
Sbjct: 195 GGGGGGGGGGGGVDGSGSGSGSGSGG 220
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical to
gi_3883126_gb_AAC77826
Length = 135
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/49 (26%), Positives = 17/49 (34%)
Frame = +3
Query: 1071 APXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAP 1217
AP P P P PP + + P PA +P P + P
Sbjct: 25 APTPTATPPPATPPPVATPPPVATPPPAATPAPATPPPAATPAPATTPP 73
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/123 (22%), Positives = 31/123 (25%), Gaps = 7/123 (5%)
Frame = -1
Query: 1292 GXGDRSXXSGPXXAXXXGXXQXRGXGGXRXWXXXGGXXXXXXARGXXSPPGXNSGGXXXX 1113
G G GP Q +G GG GG G P N GG
Sbjct: 316 GGGPGGKKGGPGGGGGNMGNQNQGGGGKNGGKGGGGHPLDGKMGGGGGGPNGNKGGGGVQ 375
Query: 1112 -------GSKXRXXXXGXXGGPPAPDXARXXAPXXGGAXXGFEPRGAXXKXXXXASSXQG 954
G K G GGP + P GG G P+ G
Sbjct: 376 MNGGPNGGKKGGGGGGGGGGGPMSGGLPPGFRPMGGGGGGGGGPQSMSMPMGGAMGGPMG 435
Query: 953 VXP 945
P
Sbjct: 436 SLP 438
>At5g33390.1 68418.m03985 glycine-rich protein similar to nuclear
antigen EBNA-1 (GI:3342234) {Cercopithecine herpesvirus
15}
Length = 118
Score = 29.9 bits (64), Expect = 4.8
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = -1
Query: 1382 SGGXXXXPAXXGGXGXGXXGXXGX-XPEPXXGXGDRSXXSGPXXAXXXGXXQXRGXGG 1212
SGG + GG G G G G G G+ SG G RG GG
Sbjct: 15 SGGSVSGGSGSGGSGSGGSGSGGSGSGGRANGRGNGGRGSGRGGGRGDGRGDGRGIGG 72
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.5 bits (63), Expect = 6.3
Identities = 20/80 (25%), Positives = 23/80 (28%)
Frame = +1
Query: 1141 PGGEXXPRAXXXXXXPPXXNXSRXPPXPRXXLXPXLXAXXGPLXXLRSPXPXXGSGXXPX 1320
P + P PP PP P + P + A P L P P
Sbjct: 489 PSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYPPP-PPLSPPPPSPPPPYIYS 547
Query: 1321 XPXXPXPXPPXXAGXXXXPP 1380
P P P PP PP
Sbjct: 548 SPPPPSPSPPPPYIYSSPPP 567
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 1074 PXPAXXPXPXLTXXXXXPPAIXSRGRGXPPXPAXXGXXTSPXPXSXAPXPP 1226
P PA P P T PPA+ PP A +P AP P
Sbjct: 40 PPPAATPAPTTT----PPPAVSPAPTSSPPSSAPSPSSDAPTASPPAPEGP 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,886,702
Number of Sequences: 28952
Number of extensions: 356256
Number of successful extensions: 808
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4202426112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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