Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_C06_e43_06.seq
         (1565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    81   3e-17
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    74   3e-15
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    67   4e-13
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    52   2e-08
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.6  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 80.6 bits (190), Expect = 3e-17
 Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
 Frame = +3

Query: 96  IQVWKPHEKYEMLHILSKGHKVVYSS--AWYLDHLMSGGDWTNFYLSDPRQMVRQYSPTA 269
           IQ W P        +L  G++++ S+  AWYLDH    G W      + R +     PT 
Sbjct: 458 IQTWVPASDNLPTLLLELGYRIIVSTKDAWYLDH----GFWGTTEYHNWRVVYNNKIPTG 513

Query: 270 NVDNIVGGEACMWGEVVNDMNVISRIWSRASAVAERLWSPETEGLRYMNKVPNEVYSRLE 449
             D  +GGE CMWGE V+D +V SR+W RA+A AERLW+  ++   Y+ +     Y    
Sbjct: 514 --DGALGGEVCMWGEYVDDSSVESRVWPRAAAAAERLWTNPSD---YVKQTERRFY---- 564

Query: 450 EHTCRMNRRGIDAQ 491
            H  R+  RGI A+
Sbjct: 565 RHRERLVARGIHAE 578


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 73.7 bits (173), Expect = 3e-15
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
 Frame = +3

Query: 96  IQVWKPHEKYEMLHILSKGHKVVYS--SAWYLDHLMSGGDW--TNFYLSDPR---QMVRQ 254
           +Q W   +  +   ++S G++V+ S   AWYLD     G W  T     DP    Q V  
Sbjct: 476 VQSWGASQWPDTPDLISDGYRVIISHVDAWYLD--CGFGRWRETGEAACDPYRPWQTVYN 533

Query: 255 YSPTA----NVDNIVGGEACMWGEVVNDMNVISRIWSRASAVAERLWS-PETEGLRYMNK 419
           + P      N   I+GGEAC+W E  ++ ++ +R+W RA+A AER+WS P+ +   +   
Sbjct: 534 HRPWQQLHLNKKQILGGEACLWSEQFDETSLDTRLWPRAAAFAERVWSDPQLDVTSF--T 591

Query: 420 VPNEVYSRLEEHTCRMNRRGIDAQP------PSGPGFCI 518
           +  +VY+RL  H  R+  RG+ A+          PG C+
Sbjct: 592 IQEDVYTRLNTHRDRLVARGLGAEAMWPVWCAQNPGMCL 630


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 66.9 bits (156), Expect = 4e-13
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 15/130 (11%)
 Frame = +3

Query: 138 ILSKGHKVVYSSA--WYLD-------HLMSGG------DWTNFYLSDPRQMVRQYSPTAN 272
           +LS GH+V+YS+   WYLD         M GG       W  FY  D R  V+      +
Sbjct: 448 VLSHGHRVIYSTVGHWYLDCGFGPWKPSMHGGVCDPYTPWHTFY--DYRPWVQH----GH 501

Query: 273 VDNIVGGEACMWGEVVNDMNVISRIWSRASAVAERLWSPETEGLRYMNKVPNEVYSRLEE 452
            + ++GGE C+W E V   ++ +RIW R++A AER+WS  + G  Y      ++Y+RL  
Sbjct: 502 QELVLGGEVCLWSEQVGPDSLETRIWPRSAAFAERIWSDPSAGDDY------DIYTRLVS 555

Query: 453 HTCRMNRRGI 482
            + R+  RGI
Sbjct: 556 FSDRLKSRGI 565


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
 Frame = +3

Query: 96  IQVWKPHEKYEMLHILSKGHKVVYSS--AWYLD-----HLMSGGDWTNFYLSDPRQMVRQ 254
           IQ+W      ++ ++L  G++V+ S+  A Y D      +  G +W + Y+   +    +
Sbjct: 443 IQIWTTGSDPQVRNLLDNGYRVILSNYDALYFDCGFAGWVTDGNNWCSPYIGWQKVYENK 502

Query: 255 YSPTAN--VDNIVGGEACMWGEVVNDMNVISRIWSRASAVAERLWSPETEGLR 407
            +  A      ++G EA +W E  +  +V +R+W RA+A+ E LWS  T   R
Sbjct: 503 PAKIAGDKKGQVLGAEAALWTEQADSASVDTRLWPRAAALGEVLWSEPTNTWR 555


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = -3

Query: 909 KTXLIPDXWHKASISGXPQPEKNICXXEKXGKXSSXG 799
           KT   PD W+     G P P       EK  + S  G
Sbjct: 302 KTNSSPDLWNGKLKHGGPTPSDATKALEKMSELSKLG 338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,014
Number of Sequences: 336
Number of extensions: 4182
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 47217925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)