Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_C06_e43_06.seq
         (1565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidas...    89   3e-19
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   5.9  

>AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidase,
           beta chain protein.
          Length = 67

 Score = 89.0 bits (211), Expect = 3e-19
 Identities = 42/73 (57%), Positives = 50/73 (68%)
 Frame = +3

Query: 300 CMWGEVVNDMNVISRIWSRASAVAERLWSPETEGLRYMNKVPNEVYSRLEEHTCRMNRRG 479
           CMW EVVN  N++ RI+ R  A AE+LWSP +     +N   +E   RLEE TCRMN RG
Sbjct: 1   CMWSEVVNGHNILPRIFPRVXATAEKLWSPAS-----VNNA-DEAARRLEEQTCRMNHRG 54

Query: 480 IDAQPPSGPGFCI 518
           I AQPP+GPGFCI
Sbjct: 55  IPAQPPNGPGFCI 67


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 117 EKYEMLHILSKGHKVVYSSAWYLDHLMSGGDWTNFYLSDPRQMVRQYS 260
           EK  ++H  + G  + Y        +   GDWT   L  P  +++  S
Sbjct: 848 EKSSLIHFFTHGF-LTYDDRQLRMFVRRNGDWTGVVLPFPANLIKSSS 894


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 117 EKYEMLHILSKGHKVVYSSAWYLDHLMSGGDWTNFYLSDPRQMVRQYS 260
           EK  ++H  + G  + Y        +   GDWT   L  P  +++  S
Sbjct: 849 EKSSLIHFFTHGF-LTYDDRQLRMFVRRNGDWTGVVLPFPANLIKSSS 895


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 962,047
Number of Sequences: 2352
Number of extensions: 16287
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184503330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)