BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030623sawa_C04_e27_06.seq (1503 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY047508-1|AAK77240.1| 412|Drosophila melanogaster GH01709p pro... 30 7.2 AE014297-4159|AAF56735.1| 412|Drosophila melanogaster CG5590-PA... 30 7.2 >AY047508-1|AAK77240.1| 412|Drosophila melanogaster GH01709p protein. Length = 412 Score = 30.3 bits (65), Expect = 7.2 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +2 Query: 194 DVVRPAASGDALLPRLFR*AAPMETALNLTILS-TEFIFEVNYS 322 D PA+ GD +P+LFR +E+ L+ I+S T+ +F+ N S Sbjct: 292 DAAAPASGGDVKIPQLFR---KIESLLSPEIVSKTQAVFQFNIS 332 >AE014297-4159|AAF56735.1| 412|Drosophila melanogaster CG5590-PA protein. Length = 412 Score = 30.3 bits (65), Expect = 7.2 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +2 Query: 194 DVVRPAASGDALLPRLFR*AAPMETALNLTILS-TEFIFEVNYS 322 D PA+ GD +P+LFR +E+ L+ I+S T+ +F+ N S Sbjct: 292 DAAAPASGGDVKIPQLFR---KIESLLSPEIVSKTQAVFQFNIS 332 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 38,695,031 Number of Sequences: 53049 Number of extensions: 614028 Number of successful extensions: 1324 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1279 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1316 length of database: 24,988,368 effective HSP length: 88 effective length of database: 20,320,056 effective search space used: 8371863072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -