Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_C02_e11_06.seq
         (1512 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    68   8e-13
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   2.5  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    25   7.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   7.6  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   10.0 

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 67.7 bits (158), Expect = 8e-13
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +2

Query: 221  LLEKIRQHFWTRRTSEYICELQQRSKWRVKCRELNLNDLVLIKETNTSPLCWRLGRVCKL 400
            L++K  QH W R   EY+  LQ+R+KW      +    LV+++E N +   W + RV  L
Sbjct: 1632 LIQKHMQHIWNRWHREYLSTLQKRAKWNKNAISIEPGRLVILQEDNVAVSKWPMARVVDL 1691

Query: 401  FLGADNIPRVAELSTVNG-IVRRALNRLVLLPV 496
              G D + RV  L   NG  +RR ++R+  LP+
Sbjct: 1692 HPGKDGVTRVVTLKCANGKEIRRPIHRIAPLPI 1724


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 525 HSFQQSMASETGRSTRRFSARRTIPLTVLNSATLGMLSAPRNSLH 391
           H FQ S +  TG  + R  A RT  L +LN +T   L A +   H
Sbjct: 579 HRFQVSKSRYTGEKSTRSDALRT--LNLLNRSTDHALLAQKRQEH 621


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 322 QLSALHTPFGSLLQFTNVFGSPSRPEVLSNL 230
           +L   H PFG + QFT      + PE++ N+
Sbjct: 60  ELKGKH-PFGGIFQFTEPVAMITDPEMIRNV 89


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 422 PRVAELSTVNGIVRRALNRLVLLPVSEAID 511
           PR+A+     G+ RR     +LLP+S  +D
Sbjct: 328 PRIADFQRQIGVGRRTPRDHLLLPLSRDVD 357


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -1

Query: 561 TAPTSSRPLKAPHSFQQSMASETGRSTRRFSARRTIP 451
           T PT+ RP+  P +F +    E     R    R  +P
Sbjct: 637 TPPTTRRPIAPPKNFPRGKVYERCELARELYYRHGLP 673


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,178,891
Number of Sequences: 2352
Number of extensions: 22727
Number of successful extensions: 58
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177188220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)