Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_B12_e90_04.seq
(1494 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 369 e-100
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 368 e-100
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 347 3e-94
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 346 1e-93
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 339 9e-92
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 331 2e-89
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 309 1e-82
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 290 5e-77
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 276 1e-72
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 267 4e-70
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 260 5e-68
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 256 1e-66
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 253 8e-66
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 253 1e-65
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 246 9e-64
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 244 4e-63
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 242 1e-62
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 242 1e-62
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 239 1e-61
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 235 2e-60
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 235 3e-60
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 231 3e-59
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 230 8e-59
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 229 1e-58
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 225 2e-57
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 225 3e-57
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 222 2e-56
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 222 2e-56
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 217 5e-55
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 217 6e-55
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 216 1e-54
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 216 1e-54
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 215 2e-54
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 215 3e-54
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 213 1e-53
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 212 2e-53
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 212 2e-53
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 210 5e-53
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 208 3e-52
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 208 3e-52
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 208 4e-52
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 207 7e-52
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 205 2e-51
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 204 5e-51
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 203 8e-51
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 202 2e-50
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 201 4e-50
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 200 6e-50
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 200 1e-49
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 200 1e-49
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 199 1e-49
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 199 2e-49
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 198 4e-49
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 194 5e-48
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 193 9e-48
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 193 1e-47
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 191 5e-47
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 190 6e-47
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 190 8e-47
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 190 1e-46
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 190 1e-46
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 189 2e-46
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 186 1e-45
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 185 2e-45
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 184 4e-45
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 184 4e-45
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 184 7e-45
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 183 9e-45
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 183 1e-44
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 182 2e-44
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 182 3e-44
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 180 7e-44
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 180 1e-43
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 178 3e-43
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 177 5e-43
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 177 8e-43
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 177 8e-43
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 177 8e-43
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 176 1e-42
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 176 1e-42
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 176 1e-42
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 176 1e-42
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 176 1e-42
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 175 2e-42
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 175 2e-42
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 175 2e-42
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 175 2e-42
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 175 3e-42
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 174 4e-42
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 173 1e-41
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 173 1e-41
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 170 7e-41
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 169 2e-40
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 169 2e-40
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 168 4e-40
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 168 4e-40
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 167 5e-40
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 167 5e-40
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 167 5e-40
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 167 5e-40
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 167 7e-40
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 166 1e-39
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 165 3e-39
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 164 5e-39
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 163 1e-38
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 162 2e-38
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 161 4e-38
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 161 6e-38
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 159 1e-37
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 159 1e-37
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 159 2e-37
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 159 2e-37
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 159 2e-37
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 158 3e-37
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 158 4e-37
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 157 5e-37
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 157 7e-37
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 157 7e-37
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 157 7e-37
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 157 9e-37
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 157 9e-37
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 156 1e-36
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 156 1e-36
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 156 2e-36
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 155 4e-36
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 154 7e-36
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 154 7e-36
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 153 2e-35
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 152 2e-35
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 152 2e-35
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 152 2e-35
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 152 2e-35
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 152 3e-35
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 152 3e-35
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 151 5e-35
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 151 5e-35
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 151 6e-35
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 150 8e-35
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 150 8e-35
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 150 8e-35
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 150 8e-35
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 150 8e-35
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 150 1e-34
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 150 1e-34
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 150 1e-34
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 150 1e-34
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 149 1e-34
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 149 2e-34
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 149 2e-34
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 149 2e-34
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 149 2e-34
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 149 2e-34
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 149 2e-34
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 149 2e-34
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 149 2e-34
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 148 4e-34
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 148 4e-34
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 148 4e-34
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 147 6e-34
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 147 6e-34
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 147 7e-34
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 146 1e-33
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 146 1e-33
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 146 1e-33
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 146 1e-33
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 146 1e-33
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 146 1e-33
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 146 1e-33
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 146 2e-33
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 145 2e-33
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 145 2e-33
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 145 2e-33
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 145 3e-33
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 144 4e-33
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 144 5e-33
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 144 5e-33
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 144 5e-33
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 144 7e-33
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 144 7e-33
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 144 7e-33
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 144 7e-33
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 144 7e-33
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 144 7e-33
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 143 9e-33
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 143 9e-33
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 143 9e-33
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 143 1e-32
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 142 2e-32
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 142 2e-32
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 142 2e-32
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 142 2e-32
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 142 3e-32
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 142 3e-32
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 142 3e-32
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 141 4e-32
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 141 4e-32
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 141 4e-32
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 141 4e-32
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 141 4e-32
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 141 5e-32
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 140 6e-32
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 140 6e-32
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 140 6e-32
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 140 6e-32
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 140 6e-32
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 140 6e-32
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 140 6e-32
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 140 9e-32
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 140 9e-32
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 140 1e-31
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 140 1e-31
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 140 1e-31
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 140 1e-31
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 139 1e-31
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 139 1e-31
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 139 1e-31
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 139 1e-31
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 139 2e-31
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 139 2e-31
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 138 3e-31
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 138 3e-31
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 138 3e-31
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 138 3e-31
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 138 3e-31
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 138 3e-31
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 138 5e-31
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 138 5e-31
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 138 5e-31
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 138 5e-31
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 137 6e-31
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 137 6e-31
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 137 6e-31
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 137 8e-31
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 137 8e-31
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 137 8e-31
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 137 8e-31
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 137 8e-31
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 136 1e-30
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 136 1e-30
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 136 1e-30
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 136 1e-30
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 136 1e-30
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 136 1e-30
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 136 1e-30
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 136 2e-30
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 136 2e-30
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 135 2e-30
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 135 3e-30
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 135 3e-30
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 135 3e-30
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 134 4e-30
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 134 4e-30
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 134 4e-30
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 134 4e-30
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 134 4e-30
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 134 4e-30
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 134 6e-30
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 134 6e-30
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 134 6e-30
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 134 6e-30
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 134 7e-30
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 134 7e-30
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 134 7e-30
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 133 1e-29
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 133 1e-29
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 133 1e-29
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 133 1e-29
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 133 1e-29
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 133 1e-29
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 133 1e-29
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 132 2e-29
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 132 2e-29
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 132 2e-29
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 132 2e-29
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 132 2e-29
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 132 2e-29
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 132 2e-29
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 132 3e-29
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 132 3e-29
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 132 3e-29
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 132 3e-29
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 132 3e-29
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 131 4e-29
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 131 4e-29
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 131 4e-29
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 131 5e-29
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 131 5e-29
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 131 5e-29
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 131 5e-29
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 131 5e-29
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 131 5e-29
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 131 5e-29
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 131 5e-29
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 131 5e-29
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 130 7e-29
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 130 7e-29
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 130 7e-29
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 130 7e-29
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 130 7e-29
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 130 9e-29
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 130 9e-29
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 130 9e-29
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 130 9e-29
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 130 9e-29
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 130 1e-28
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 130 1e-28
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 130 1e-28
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 130 1e-28
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 130 1e-28
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 129 2e-28
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 129 2e-28
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 129 2e-28
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 129 2e-28
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 129 2e-28
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 128 3e-28
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 128 3e-28
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 128 4e-28
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 128 5e-28
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 128 5e-28
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 127 6e-28
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 127 6e-28
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 127 6e-28
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 127 6e-28
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 127 6e-28
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 127 9e-28
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 127 9e-28
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 127 9e-28
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 126 1e-27
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 126 1e-27
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 126 1e-27
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 126 1e-27
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 126 1e-27
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 126 1e-27
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 126 1e-27
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 126 1e-27
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 126 1e-27
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 126 2e-27
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 126 2e-27
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 126 2e-27
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 126 2e-27
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 125 3e-27
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 125 3e-27
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 125 3e-27
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 125 3e-27
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 125 3e-27
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 125 3e-27
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 125 3e-27
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 125 3e-27
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 125 3e-27
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 125 3e-27
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 125 3e-27
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 125 3e-27
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 125 3e-27
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 125 3e-27
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 125 3e-27
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 125 3e-27
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 125 3e-27
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 124 5e-27
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 124 5e-27
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 124 5e-27
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 124 5e-27
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 124 6e-27
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 124 6e-27
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 124 6e-27
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 124 6e-27
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 124 6e-27
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 124 8e-27
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 124 8e-27
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 124 8e-27
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 124 8e-27
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 124 8e-27
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 123 1e-26
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 123 1e-26
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 123 1e-26
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 123 1e-26
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 123 1e-26
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 123 1e-26
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 123 1e-26
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 123 1e-26
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 123 1e-26
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 123 1e-26
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 123 1e-26
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 123 1e-26
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 122 2e-26
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 122 2e-26
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 122 2e-26
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 122 2e-26
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 122 2e-26
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 122 2e-26
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 122 2e-26
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 122 2e-26
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 122 2e-26
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 122 2e-26
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 122 2e-26
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 122 3e-26
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 122 3e-26
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 122 3e-26
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 122 3e-26
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 122 3e-26
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 121 4e-26
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 121 4e-26
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 121 4e-26
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 121 4e-26
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 121 6e-26
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 121 6e-26
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 121 6e-26
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 121 6e-26
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 120 7e-26
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 120 7e-26
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 120 1e-25
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 120 1e-25
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 120 1e-25
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 120 1e-25
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 120 1e-25
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 120 1e-25
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 120 1e-25
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 120 1e-25
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 119 2e-25
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 119 2e-25
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 119 2e-25
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 119 2e-25
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 119 2e-25
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 119 2e-25
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 119 2e-25
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 119 2e-25
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 118 3e-25
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 118 3e-25
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 118 3e-25
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 118 3e-25
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 118 3e-25
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 118 4e-25
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 118 4e-25
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 118 4e-25
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 118 4e-25
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 118 4e-25
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 118 5e-25
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 118 5e-25
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 118 5e-25
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 117 7e-25
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 117 7e-25
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 117 7e-25
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 117 7e-25
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 117 9e-25
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 117 9e-25
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 117 9e-25
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 117 9e-25
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 117 9e-25
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 116 1e-24
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 116 2e-24
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 116 2e-24
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 116 2e-24
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 116 2e-24
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 116 2e-24
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 116 2e-24
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 116 2e-24
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 116 2e-24
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 116 2e-24
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 116 2e-24
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 116 2e-24
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 116 2e-24
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 116 2e-24
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 116 2e-24
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 116 2e-24
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 116 2e-24
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 115 3e-24
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 115 3e-24
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 115 3e-24
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 115 3e-24
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 115 3e-24
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 115 4e-24
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 115 4e-24
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 115 4e-24
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 114 5e-24
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 114 5e-24
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 114 5e-24
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 114 6e-24
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 114 6e-24
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 114 6e-24
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 114 6e-24
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 114 6e-24
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 114 6e-24
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 113 9e-24
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 113 9e-24
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 113 9e-24
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 113 9e-24
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 113 9e-24
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 113 9e-24
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 113 1e-23
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 113 1e-23
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 113 1e-23
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 113 1e-23
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 113 1e-23
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 113 1e-23
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 113 1e-23
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 113 1e-23
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 113 1e-23
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 112 2e-23
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 112 2e-23
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 112 2e-23
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 112 3e-23
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|Rep:
GH10652p - Drosophila melanogaster (Fruit fly)
Length = 818
Score = 369 bits (907), Expect = e-100
Identities = 186/292 (63%), Positives = 222/292 (76%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++LVGVAQTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA EF
Sbjct: 194 GRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEF 253
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G++++VRNTC+FGGAPK +QARDLERGVEIVIATPGRLIDFLE+GTT+L+RCTYLVLDEA
Sbjct: 254 GSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEA 313
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPKEVR+LAE++L +Y+Q+NIGSL LSAN
Sbjct: 314 DRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSAN 373
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
HNILQIVDVC E+EK KL LL +I + + + ++ K++ +
Sbjct: 374 HNILQIVDVCDENEKLMKLIKLLTDISAENE--TKTIIFVETKKRVDEITRNISRQGWRA 431
Query: 834 CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
CA + ++ + SILVATDV R F IN+D P
Sbjct: 432 CAIHGDKSQQERDFVLSSFRNGRHSILVATDVAA-RGLDVDDVKFVINYDYP 482
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 368 bits (905), Expect = e-100
Identities = 185/292 (63%), Positives = 215/292 (73%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G N VG+A+TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA+EF
Sbjct: 318 GSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEF 377
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G+SSYVRNTCVFGGAPK Q RDL+RG EIVIATPGRLIDFL G+TNL+RCTYLVLDEA
Sbjct: 378 GSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEA 437
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQIRKI+ QIRPDRQTLMWSATWPKEV++LAED+L +Y+QINIGSL+LSAN
Sbjct: 438 DRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSAN 497
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
HNI Q+VDVC E KE KL LL +I + + + ++ K + +
Sbjct: 498 HNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRC 557
Query: 834 CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
A + + + S+ILVATDV R G + INFD P
Sbjct: 558 GAIHGDKSQSERDFVLREFRSGKSNILVATDVAA-RGLDVDGIKYVINFDYP 608
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 347 bits (854), Expect = 3e-94
Identities = 163/211 (77%), Positives = 183/211 (86%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VG+AQTGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELAQQIQQVA++F
Sbjct: 159 GRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDF 218
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G NTCVFGGAPK Q RDLERG EIVIATPGRLIDFLE+G TNL+RCTYLVLDEA
Sbjct: 219 GQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEA 278
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPKEVR LAE++L DY+QINIGSL LSAN
Sbjct: 279 DRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSAN 338
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
HNILQIVDVC+++EK+ KL LL EI +
Sbjct: 339 HNILQIVDVCEDYEKDQKLMKLLTEISAENE 369
Score = 39.9 bits (89), Expect = 0.17
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +2
Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
KTIIFVETKR+ GW AV +H DK ++ F+ GR
Sbjct: 371 KTIIFVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVLNAFRNGR 419
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 346 bits (850), Expect = 1e-93
Identities = 174/292 (59%), Positives = 212/292 (72%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VG+A+TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV ++F
Sbjct: 138 GRDMVGIAKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDF 197
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + NTC+FGGA K QA DL RGVEIVIATPGRLIDFLE GTTNL+R TYLVLDEA
Sbjct: 198 GRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEA 257
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQIRKII QIRPDRQ LMWSATWPKE+RKLAE++L +Y+QINIGSL L+AN
Sbjct: 258 DRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAAN 317
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
NI+QI++ C+E+EKE +L LL E+ Q D ++ + ++ K K + +
Sbjct: 318 ENIMQIIECCEEYEKETRLFKLLTELSQQGD--SKSIIFVETKRKVDQITNVIKRNGWRC 375
Query: 834 CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
T + +R+ S ILVATDV R + INFD P
Sbjct: 376 DGIHGDKTQKDRDYVLNTFRRLRSGILVATDV-ASRGLDVDDVKYVINFDFP 426
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase - Aedes
aegypti (Yellowfever mosquito)
Length = 911
Score = 339 bits (834), Expect = 9e-92
Identities = 180/295 (61%), Positives = 214/295 (72%), Gaps = 3/295 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++LVG+AQTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V +F
Sbjct: 266 GRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDF 325
Query: 294 GNSS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
G S +R TC+FGGA K Q RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLVLD
Sbjct: 326 GTHSKPLIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLD 385
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
EADRMLDMGFEPQIRKII+QIRPDRQ LMWSATWPKEV+ LAED+L DY+QINIGSL LS
Sbjct: 386 EADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLS 445
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEK-RXTXPEISDDMD 824
ANHNI QIVDVC+E EKE KL LL+EI + D ++ + ++ K+K I D
Sbjct: 446 ANHNIHQIVDVCEEGEKEGKLLSLLKEI--SSDVNSKIIIFVETKKKVEDLLKNIVRDGY 503
Query: 825 GQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
G + + + + S+ILVATDV R + INFD P
Sbjct: 504 GATSIHGDKSQSERD-YVLQDFRHGKSTILVATDVAA-RGLDVEDVKYVINFDYP 556
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 331 bits (814), Expect = 2e-89
Identities = 168/293 (57%), Positives = 212/293 (72%), Gaps = 1/293 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VG+A+TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV +F
Sbjct: 124 GRDMVGIAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDF 183
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + ++NTC+FGG KR+Q DL+ GVEIVIATPGRLIDFL TNL+RC+YLVLDEA
Sbjct: 184 GRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEA 243
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQIR II+QIRPD QTLMWSATWP V +L +DYL DY+QIN+GSL+L+AN
Sbjct: 244 DRMLDMGFEPQIRAIIEQIRPDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAAN 303
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
HNILQI+DVCQEHEKE KL++LL+EI ++ + + ++ K KR DG
Sbjct: 304 HNILQIIDVCQEHEKEAKLSILLREIMAEKE--CKTIIFIETK-KRVDDITRKVLRDGWP 360
Query: 834 CACT-XTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
C + R+ + + IL+ATDV R F INFD P
Sbjct: 361 AMCIHGDKSQREREYTLNSFRSGKNPILIATDVAA-RGLDVDDVKFVINFDYP 412
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 309 bits (758), Expect = 1e-82
Identities = 143/211 (67%), Positives = 174/211 (82%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VG+A+TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ +F
Sbjct: 171 GRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKF 230
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G SS +RNTCV+GG PK Q RDL RGVE+ IATPGRLID LE G TNL+R TYLVLDEA
Sbjct: 231 GRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEA 290
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQIRKII QIRPDRQTLMWSATWPKEVR LA D+L D++Q+NIGS++L+AN
Sbjct: 291 DRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAAN 350
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
H I QIV+V E EK +++ ++++ +N++
Sbjct: 351 HRITQIVEVVTEMEKRDRMIKHMEKVMENKE 381
Score = 35.9 bits (79), Expect = 2.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
K +IFV TKR A GWPA+ +H DK + FK G+
Sbjct: 383 KILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGK 431
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 290 bits (712), Expect = 5e-77
Identities = 134/207 (64%), Positives = 167/207 (80%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++++G+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + +
Sbjct: 287 KGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGK 346
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
FG+ S R+TC++GGAPK Q RDL RGVEIVIATPGRLID LE G TNL+R TYLVLDE
Sbjct: 347 FGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDE 406
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWP+EV LA +L + ++ IGS L A
Sbjct: 407 ADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKA 466
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEI 731
NH+I QI++V EHEK +L+ LL ++
Sbjct: 467 NHSIQQIIEVISEHEKYPRLSKLLSDL 493
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 276 bits (676), Expect = 1e-72
Identities = 150/296 (50%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +++G+A+TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A++F
Sbjct: 25 GHDMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQF 84
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G+ +RNT ++GG PKR Q + GVEI IA PGRLID LE+G TNL R TYLVLDEA
Sbjct: 85 GSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEA 144
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSLQ-LS 647
DRMLDMGFEPQIRK++ QIRPDRQTL+WSATWPKEV+KLA D + + IN+GS+ L
Sbjct: 145 DRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALK 204
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISD-DMD 824
A+HNI Q V+V +E EK+ +L + L GQ A P L+ + KR + +D
Sbjct: 205 ASHNIKQYVNVVEESEKKARLKMFL---GQVMVESA-PKVLIFCETKRGADILTKELRLD 260
Query: 825 GQLCACTXTNTARKG*S-XXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
G C + ++ + + S I++ATDV R NF INFD P
Sbjct: 261 GWPALCIHGDKKQEERTWVLNEFRTGASPIMIATDVAA-RGLDIKDINFVINFDFP 315
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 267 bits (655), Expect = 4e-70
Identities = 132/207 (63%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+A+TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A F
Sbjct: 247 GRDMIGIAETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVF 306
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G SS ++ + +GG PKR Q L RGVEI+IA PGRLIDFLE TNL+R TYLVLDEA
Sbjct: 307 GRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEA 366
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQLSA 650
DRMLDMGFEPQIRKI+ QIRPDRQTLM+SATWPKEV L+ L + V +NIGSL L+
Sbjct: 367 DRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTT 426
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEI 731
HNI Q V + +E EK KL LL+++
Sbjct: 427 CHNIEQNVFILEEREKRVKLKELLKKL 453
Score = 42.7 bits (96), Expect = 0.024
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 752 GKTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
GK +IF ETK+ A GWPA+C+H DK ++ FK G+
Sbjct: 457 GKILIFSETKKGADTLTRELRLDGWPALCIHGDKKQEERTWVLNEFKSGK 506
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 260 bits (638), Expect = 5e-68
Identities = 121/199 (60%), Positives = 153/199 (76%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VG+AQTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V EF
Sbjct: 124 GRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEF 183
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+R+T V+GGA + Q R L G E+VIATPGRLID ++G L R T+LVLDEA
Sbjct: 184 CGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEA 243
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQ+RKII + +RQTLMWSATWP+EVR LAE Y+ +Y+Q+ +G+ +L N
Sbjct: 244 DRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTN 303
Query: 654 HNILQIVDVCQEHEKENKL 710
I QIV+VC EKE+KL
Sbjct: 304 SKIKQIVEVCSGREKEDKL 322
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 256 bits (627), Expect = 1e-66
Identities = 123/200 (61%), Positives = 157/200 (78%), Gaps = 1/200 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +L+G+A+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + F
Sbjct: 138 GHDLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERF 197
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G SS ++ C++GGA K Q L++GV++VIATPGRLIDFLE TT L+R TYLVLDEA
Sbjct: 198 GKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEA 257
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSLQLSA 650
DRMLDMGFE QIRKI+ QIRPDRQTLM+SATWPK V+ LA+DY + V + IG +L+
Sbjct: 258 DRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAI 317
Query: 651 NHNILQIVDVCQEHEKENKL 710
N I QIV V + +K N+L
Sbjct: 318 NERIKQIVYVTDQSKKINQL 337
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 253 bits (620), Expect = 8e-66
Identities = 119/204 (58%), Positives = 159/204 (77%), Gaps = 1/204 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +L+G+AQTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ +F
Sbjct: 250 GHDLIGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKF 309
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G+ + + CV+GGAPK Q ++L G +IVIATPGRLIDFLE +L+R TYLVLDEA
Sbjct: 310 GSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEA 369
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQLSA 650
DRMLDMGFEP IRKI+ QIRPDRQTLM+SATWP+ VR+LA D+ D + I IG ++ +
Sbjct: 370 DRMLDMGFEPSIRKIVGQIRPDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNV 429
Query: 651 NHNILQIVDVCQEHEKENKLNVLL 722
N++I Q V++ + +K +++ +L
Sbjct: 430 NNDIDQQVEIIDKSQKYDRVKEIL 453
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 253 bits (619), Expect = 1e-65
Identities = 121/193 (62%), Positives = 151/193 (78%), Gaps = 1/193 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++G A+TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q +F
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKF 209
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
S +RNTC +GG PK Q L++GV I+IA PGRLID LE+ TNL R TYLVLDEA
Sbjct: 210 STESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEA 269
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSLQLSA 650
D+MLDMGFE QIRKI+DQIRPDRQTLMWSATWPKEV+ LA+D + +Q+N+GSL L+A
Sbjct: 270 DKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTA 329
Query: 651 NHNILQIVDVCQE 689
+I Q + + ++
Sbjct: 330 CRSIKQEIYLLED 342
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 246 bits (603), Expect = 9e-64
Identities = 117/206 (56%), Positives = 154/206 (74%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G +L+G+A+TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA
Sbjct: 161 KGHDLIGIAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKG 220
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
F ++ +R TC+FGGA + QA DL +V+ATPGRLIDF+E G + R +LVLDE
Sbjct: 221 FCDNLMIRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDE 280
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
AD+MLDMGFEPQIRKII I DRQT+M+SATWPKE+++LA D+L D V + IG+ L+
Sbjct: 281 ADQMLDMGFEPQIRKIIGHISKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTT 340
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQE 728
N NI Q++ C+E EK +K +L E
Sbjct: 341 NSNIKQVITKCEEFEKLSKCLEVLNE 366
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 244 bits (598), Expect = 4e-63
Identities = 119/211 (56%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QV 281
L +++VGVA+TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ +
Sbjct: 179 LLNSRDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETET 238
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ TCV+GG PK Q R L GV + IATPGRLID LE TNL R TYL
Sbjct: 239 RKALTRVPSIMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLT 298
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRMLDMGFE QIRKI QIR DRQTLM+SATWP+E+R LA + D+V+++IGS +
Sbjct: 299 LDEADRMLDMGFEDQIRKICSQIRTDRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEE 358
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
L AN ++ Q V V + + KE K+ +L+++G
Sbjct: 359 LVANADVHQHVFVVEGYHKEEKMEEILRQVG 389
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 242 bits (593), Expect = 1e-62
Identities = 104/211 (49%), Positives = 159/211 (75%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
QGK++VG+A+TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A +
Sbjct: 189 QGKDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIK 248
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
F + ++ FGG P+ Q +D + G +I +ATPGRLIDF+++G T+L RCT+L+LDE
Sbjct: 249 FTKGTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDE 308
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRML+MGFE Q++ II QIRPDRQT+MW+ATWP+ +++ A ++ +QINIG+ L A
Sbjct: 309 ADRMLEMGFEVQVQDIIGQIRPDRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHA 368
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
N ++ QI++VCQE ++++K+N +++ IG +
Sbjct: 369 NESVKQIIEVCQERDRDSKMNEIVKRIGSEK 399
Score = 34.7 bits (76), Expect = 6.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGRFQY 910
K +IFV+TKR A + CMH DK + + +FK G Y
Sbjct: 400 KVLIFVKTKRSADNLCYKLRDQRYRVACMHGDKVQAERDRALSDFKSGAVNY 451
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 242 bits (593), Expect = 1e-62
Identities = 117/208 (56%), Positives = 156/208 (75%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L G++LVGVA+TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++
Sbjct: 136 LLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEET 195
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ V CV+GGAPK Q L RGV I++ATPGRLIDFL+ NL R TYLVL
Sbjct: 196 KKVIPGD-VYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVL 254
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGFEPQ+RKI QIRPDRQT+M+SATWP+E+++LA ++ +++I++GS +L
Sbjct: 255 DEADRMLDMGFEPQVRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTEL 314
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQE 728
AN ++ Q + QE K+++L L+QE
Sbjct: 315 QANKDVTQRFILTQEFAKQDELRKLMQE 342
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 239 bits (586), Expect = 1e-61
Identities = 121/225 (53%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+ +++V VA+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A +
Sbjct: 267 RNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKK 325
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
FG SS + + C++GGAPK Q RDLERG +IV+ATPGRL D LE +L + +YLVLDE
Sbjct: 326 FGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDE 385
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL-QLS 647
ADRMLDMGFEPQIRKI+ Q++P RQTLM++ATWPKEVRK+A D L + VQ+NIG+ QL
Sbjct: 386 ADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLV 445
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
AN +I Q VDV EK +L+ +L ++Q+PG++ + K
Sbjct: 446 ANKSITQYVDVITPPEKSRRLDQIL----RSQEPGSKIIIFCSTK 486
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 235 bits (575), Expect = 2e-60
Identities = 111/161 (68%), Positives = 133/161 (82%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++L+G+A+TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A++
Sbjct: 132 KGRDLIGIAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATK 191
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
FG SS ++NTC++GG PK Q RDL++GVEIVIATPGRLID LE TNL+R T +VLDE
Sbjct: 192 FGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVT-IVLDE 250
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
ADRMLDMGFEPQIRK I PDRQTL WSATWPK V ++
Sbjct: 251 ADRMLDMGFEPQIRKCISD-TPDRQTLYWSATWPKNVNHVS 290
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 235 bits (574), Expect = 3e-60
Identities = 124/207 (59%), Positives = 150/207 (72%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++L+G+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A++
Sbjct: 129 RGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATK 188
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
FG VEIVIATPGRLID +E TNL+R TYLVLDE
Sbjct: 189 FG--------------------------VEIVIATPGRLIDMIESHHTNLRRITYLVLDE 222
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV +LA ++L D ++ IGS +L A
Sbjct: 223 ADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKA 282
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEI 731
NH I Q V++ E +K NKL LL++I
Sbjct: 283 NHAISQHVEILSESQKYNKLVNLLEDI 309
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 231 bits (566), Expect = 3e-59
Identities = 125/246 (50%), Positives = 167/246 (67%), Gaps = 1/246 (0%)
Frame = +3
Query: 48 IPRAAGNSARGTGSRXGQSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 227
I RA +S ++ Q +++V +A+TGSGKTL Y+LP +HI R GP
Sbjct: 165 IQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GP 223
Query: 228 IALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 407
LVLAPTRELA QI + A +FG SS + +TC++GGAPK Q RDL+RGV++V+ATPGRL
Sbjct: 224 TVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRL 283
Query: 408 IDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRK 587
D LE +L++ +YLVLDEADRMLDMGFEPQIRKI+ +I P RQTLM++ATWPKEVR+
Sbjct: 284 NDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWPKEVRR 343
Query: 588 LAEDYLXDYVQINIGSL-QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPL 764
+AED L VQ+ IGS+ +L AN I Q V++ EK + L++I ++QD G++ L
Sbjct: 344 IAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRR----LEQILRSQDSGSKVL 399
Query: 765 YLLKLK 782
K
Sbjct: 400 IFCTTK 405
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 230 bits (562), Expect = 8e-59
Identities = 106/211 (50%), Positives = 157/211 (74%), Gaps = 2/211 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 278
L +G++L+G+AQTG+GKTLA++LPA++HI QP I RG+ GP LVLAPTRELA QI++
Sbjct: 140 LLRGEDLIGIAQTGTGKTLAFLLPALIHIEGQP-IPRGERGGPNVLVLAPTRELALQIEK 198
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+++ ++ C++GG +R Q + GVEI+IATPGRL D +++G ++ TYL
Sbjct: 199 EVAKYQFRG-IKAVCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYL 257
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
+LDEADRMLDMGFEPQIRK++ +RPDRQT+M SATWP VR+LA+ Y+ D +Q+ IG+L
Sbjct: 258 ILDEADRMLDMGFEPQIRKVLLDVRPDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTL 317
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
L+A H + Q+++V E +K ++N ++++
Sbjct: 318 DLAATHTVTQVIEVMDEEDKFQRINEFVRDM 348
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA helicase
40; n=2; core eudicotyledons|Rep: Probable DEAD-box
ATP-dependent RNA helicase 40 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1088
Score = 229 bits (561), Expect = 1e-58
Identities = 114/206 (55%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
Q +++V +A+TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A
Sbjct: 471 QSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALR 529
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
FG SS + TC++GGAPK Q ++LERG +IV+ATPGRL D LE + Q+ + LVLDE
Sbjct: 530 FGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDE 589
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL-QLS 647
ADRMLDMGFEPQIRKI+++I P RQTLM++ATWPKEVRK+A D L + VQ+NIG + +L+
Sbjct: 590 ADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELA 649
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQ 725
AN I Q V+V + EKE +L +L+
Sbjct: 650 ANKAITQYVEVVPQMEKERRLEQILR 675
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 225 bits (550), Expect = 2e-57
Identities = 113/225 (50%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
Q +++V +A+TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A +
Sbjct: 197 QNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALK 255
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
FG SS + C++GGAPK Q +++ERGV+IV+ATPGRL D LE +L + +YLVLDE
Sbjct: 256 FGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDE 315
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL-QLS 647
ADRMLDMGFEPQIRKI++++ RQTLM++ATWPKEVRK+A D L + Q+NIG++ +L
Sbjct: 316 ADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELV 375
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
AN +I Q ++V EK ++ L++I ++Q+PG++ + K
Sbjct: 376 ANKSITQTIEVLAPMEKHSR----LEQILRSQEPGSKIIIFCSTK 416
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 225 bits (549), Expect = 3e-57
Identities = 106/204 (51%), Positives = 147/204 (72%), Gaps = 1/204 (0%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S G++++GV+QTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI +
Sbjct: 352 SCLTGRDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEE 410
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
A + +R ++GGA K Q R+L+ G EI++ATPGRL++FL GT L R +Y V
Sbjct: 411 ARPYSRLLNLRLVPIYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFV 470
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSL 638
+DEADRMLDMGFEPQIRKI+ QIRPDRQTLM+SATWP E+++LA ++ + + I +G L
Sbjct: 471 MDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPSEIKRLASEFCKANSIYIQVGDL 530
Query: 639 QLSANHNILQIVDVCQEHEKENKL 710
+L+AN NI Q V+ +E +KL
Sbjct: 531 ELTANPNIRQNVEFPNSYEVRDKL 554
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 222 bits (543), Expect = 2e-56
Identities = 125/297 (42%), Positives = 177/297 (59%), Gaps = 4/297 (1%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G ++VG+A+TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VA++
Sbjct: 121 KGNDMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQ 180
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
F ++ C++GG + Q L EIV ATPGRLIDFL+ G N R +LVLDE
Sbjct: 181 FCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDE 240
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGFEPQIR II + DR+T M+SATWPKE+R+LA D+L + + +++G +L+
Sbjct: 241 ADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELAT 300
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQ 830
N I Q V + QEHEK K +L+E NQ ++ K KR T ++SD + +
Sbjct: 301 NERIQQNVLLLQEHEKGEKCVEILKE---NQS----KKIIIFAKTKR-TVQQLSDFLKSK 352
Query: 831 LCACTXTNTARKG*SXXPILKRV----VSSILVATDVGCXRS*CGMGSNFXINFDXP 989
C + + L + +LVATDV R + +N+D P
Sbjct: 353 SIRCLSIHGDKTQQERVVALDKFKNARTGGVLVATDVAA-RGLDVTDIDLVLNYDFP 408
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 222 bits (542), Expect = 2e-56
Identities = 120/278 (43%), Positives = 174/278 (62%), Gaps = 3/278 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G ++VG+A TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V
Sbjct: 61 IMSGHDMVGIAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVF 119
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+ G +S VR CV+GGAPK EQ ++ G +++ATPGRL DF+E+G L R T L
Sbjct: 120 DDAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTML 179
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
VLDEADRMLD+GFEP+IR I R DRQT+M+SATWP+ V+ LA +++ + +++ IG+
Sbjct: 180 VLDEADRMLDLGFEPEIRAIAGATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAE 239
Query: 639 QLSANHNILQIVDVCQEHEKENKL-NVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISD 815
L A+ +I QIV+V + +K+ L V+ Q +G+ ++ ++ L KE +S
Sbjct: 240 GLKASQSITQIVEVVEPQDKDRHLARVMKQYLGKGKEVPRTLIFGLYKKECANLHQRLSR 299
Query: 816 DMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
+ + R+ K+ S IL+ATDV
Sbjct: 300 EWPAVCIHGDMSQHDRE--KSVDAFKKGTSRILIATDV 335
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 217 bits (531), Expect = 5e-55
Identities = 126/297 (42%), Positives = 178/297 (59%), Gaps = 5/297 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++L+G A+TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F
Sbjct: 155 GRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAF 214
Query: 294 GNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
S ++N V GG +Q +L GVEI +ATPGR ID L++G T+L R +Y+VLDE
Sbjct: 215 SRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDE 274
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGFEPQIR+I+ + QTL++SAT P E+ LA++YL + VQ+ +G + S
Sbjct: 275 ADRMLDMGFEPQIREIMRSLPEKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVS-SP 333
Query: 651 NHNILQ-IVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDG 827
N+ Q +V V + + L++L++E Q + G R + E++ E+++ +
Sbjct: 334 TTNVSQTLVKVSGSEKIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKTRCDEVAEALVA 393
Query: 828 QLCACTXTNTARKG*SXXPILKRVVS---SILVATDVGCXRS*CGMGSNFXINFDXP 989
Q + + L+ S SILVATDV R G + IN D P
Sbjct: 394 QGLSAVSLHGGHSQNEREAALQNFRSSSTSILVATDV-ASRGLDVTGVSHVINLDLP 449
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 217 bits (530), Expect = 6e-55
Identities = 106/217 (48%), Positives = 150/217 (69%), Gaps = 3/217 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++++GVA+TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI +
Sbjct: 451 AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
F +R C +GGAP ++Q DL+RG EIV+ TPGR+ID L TNL RCT
Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCT 570
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
YLVLDEADRM D+GFEPQ+ +II+ IRPDRQT+++SAT+P+ + LA L V+I +G
Sbjct: 571 YLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVG 630
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+ A+ + QIV+V E K ++L LL E+ NQ
Sbjct: 631 GRSVVAS-EVEQIVEVRPEESKFSRLLELLGELYNNQ 666
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 216 bits (528), Expect = 1e-54
Identities = 103/189 (54%), Positives = 136/189 (71%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+A+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A F
Sbjct: 143 GRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRF 202
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + + VFGG K EQ++ L+ G EIV+ATPGRLID ++ TNL R TYLV DEA
Sbjct: 203 GKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEA 262
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRM DMGFEPQ+R I + +RPDRQTL++SAT+ K+V L D L D V++ IG L AN
Sbjct: 263 DRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELG-EAN 321
Query: 654 HNILQIVDV 680
++ QIV +
Sbjct: 322 EDVTQIVHI 330
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 216 bits (528), Expect = 1e-54
Identities = 110/215 (51%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G +L+G+AQTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+
Sbjct: 105 IMSGHDLIGIAQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHI 161
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
S F + + + C++GGA KR Q L R +IV+ATPGRLIDFL+ TNL TYLVL
Sbjct: 162 SYFSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVL 221
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQ 641
DEADRMLDMGFE Q+RKI IR DRQT+ +SATWPK V+ LA D + + + IGS +
Sbjct: 222 DEADRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQE 281
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
++ N NI Q ++EK+ +L +L+E+ N+D
Sbjct: 282 VTINKNITQETICLYQNEKQEELLYILEEL-SNKD 315
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24; n=7;
Magnoliophyta|Rep: DEAD-box ATP-dependent RNA helicase 24
- Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 215 bits (525), Expect = 2e-54
Identities = 118/275 (42%), Positives = 173/275 (62%), Gaps = 3/275 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+A+TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A +F
Sbjct: 265 GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKF 324
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ +R + V+GG K EQ ++L+ G EIV+ATPGRLID L+ + R +YLVLDEA
Sbjct: 325 SKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEA 384
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRM D+GFEPQ+R I+ QIRPDRQTL++SAT P +V KLA + L D +++ +G + + AN
Sbjct: 385 DRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-AN 443
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
+I Q+V+V + KL LL+++ D G +L K+ T EI +
Sbjct: 444 EDITQVVNVIPSDAE--KLPWLLEKLPGMIDEGD----VLVFASKKATVDEIEAQLTLNS 497
Query: 834 CACTXTNTARKG*SXXPILKRV---VSSILVATDV 929
+ + S L++ V +L+ATDV
Sbjct: 498 FKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV 532
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 215 bits (524), Expect = 3e-54
Identities = 104/213 (48%), Positives = 150/213 (70%), Gaps = 3/213 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQ 275
L +G++L+G+AQTG+GKTLA++LPA +HI QP + RG+ GP LV+APTRELA QI+
Sbjct: 357 LLKGEDLIGIAQTGTGKTLAFLLPAFIHIEGQP-VPRGEARGGPNVLVMAPTRELALQIE 415
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
+ ++ ++ C++GG +R Q ++ GVEI+IATPGRL D + ++ TY
Sbjct: 416 KEVFKYQFRD-IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITY 474
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LVLDEADRMLDMGFEPQIRK++ IRPDRQT+M SATWP VR+LA+ Y+ + VQ+ +G+
Sbjct: 475 LVLDEADRMLDMGFEPQIRKLLLDIRPDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGT 534
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
L L+A H + Q ++V E +K ++ + +G
Sbjct: 535 LDLAATHTVTQQIEVIDEEDKYMRVMNFVTNMG 567
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 213 bits (519), Expect = 1e-53
Identities = 107/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++++GVA+TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI +
Sbjct: 630 ALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKD 689
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 452
F +R C +GGAP REQ +L+RG EI++ TPGR+ID L + TNL+R T
Sbjct: 690 CKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVT 749
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
Y+VLDEADRM DMGFEPQ+ KI +RPDRQT+++SAT P+ + L + L + +++ +G
Sbjct: 750 YVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVG 809
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEK 788
+ A I QIV+V E K +++ LL E+ ++D AR L ++ +EK
Sbjct: 810 GRSVVAK-EIEQIVEVRDEPSKFHRVLELLGEL-YDRDEDARTLIFVERQEK 859
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 212 bits (518), Expect = 2e-53
Identities = 103/221 (46%), Positives = 149/221 (67%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+A+TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI F
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + +R+ V+GG EQA+ L+ G EIV+ TPGRLID ++K TNLQR +YLV DEA
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEA 409
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRM DMGFE Q+R I +RPDRQTL++SAT+ K++ KLA D L D +++ G + AN
Sbjct: 410 DRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG-EAN 468
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLK 776
++ QIV++ H +K N L + + + G+ L++ K
Sbjct: 469 EDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGSVLLFVTK 507
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 212 bits (517), Expect = 2e-53
Identities = 108/201 (53%), Positives = 143/201 (71%), Gaps = 1/201 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +L+G+AQTGSGKTLA++LPAIVHI Q R P L+LAPTREL QI +F
Sbjct: 171 GHDLIGIAQTGSGKTLAFLLPAIVHILAQA---RSHDPKCLILAPTRELTLQIYDQFQKF 227
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
S + C++GG + Q L +G +I+IA PGRLID L++G T L++ ++LVLDEA
Sbjct: 228 SVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEA 287
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQLSA 650
DRMLDMGFEPQIRKI+DQIRP RQT+++SATWPKEV+KLA D+ + V I IG+++L++
Sbjct: 288 DRMLDMGFEPQIRKIVDQIRPQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTS 347
Query: 651 NHNILQIVDVCQEHEKENKLN 713
N I QIV V + +K + N
Sbjct: 348 NRMIKQIVYVMKAIDKNQRYN 368
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 210 bits (514), Expect = 5e-53
Identities = 108/232 (46%), Positives = 156/232 (67%), Gaps = 3/232 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++++GVA+TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI +
Sbjct: 587 AIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKE 646
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
F + +R C +GGA ++Q DL+RG EI++ TPGR+I+ L + TNLQR T
Sbjct: 647 CKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVT 706
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
Y+VLDEADRM DMGFEPQ+ K+ + IRP+RQT+++SAT P+ + LA+ L V+I +G
Sbjct: 707 YVVLDEADRMFDMGFEPQVMKVFNNIRPNRQTILFSATMPRIMDALAKKTLQSPVEIVVG 766
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEK 788
+ A I QIV+V +E EK ++L LL E+ N D AR L + +EK
Sbjct: 767 GRSVVA-PEITQIVEVREEKEKFHRLLELLGEL-YNTDEDARTLIFVDRQEK 816
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 208 bits (508), Expect = 3e-52
Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 3/210 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S+ G++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q +
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
A++F ++ C +GG EQ DL+RG EIV+ TPGR+ID L + TNL+R T
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVT 456
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
YLVLDEADRM D GFEPQI K+++ IRPD+QT+++SAT+P+ + LA L V+I +G
Sbjct: 457 YLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVG 516
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+ + +I Q +C EH+K KL LL
Sbjct: 517 GKSVVCS-DITQNAVICAEHQKFLKLLELL 545
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 208 bits (508), Expect = 3e-52
Identities = 115/306 (37%), Positives = 182/306 (59%), Gaps = 12/306 (3%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++++GVA+TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI +
Sbjct: 350 AIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKE 409
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
+ F + + C FGG+ Q +L++G +I++ TPGR+ID L + TNLQR T
Sbjct: 410 LNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVT 469
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
YLVLDEADRM DMGFEPQ+ K+ ++RPDRQT+++SAT+P+++ LA+ L + ++I +G
Sbjct: 470 YLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATFPRKMELLAKKILDNPMEIVVG 529
Query: 633 SLQLSANHNILQIVDVCQEHE----KENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTX 800
+ + A+ I Q V++ + + +E K + LL + D A +L EK+
Sbjct: 530 GISVVAS-EITQKVELFENEDDKSLEEAKFSKLLSTLNDYGDKDAE-CKILIFVEKQIAA 587
Query: 801 PEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSS-----ILVATDVGCXRS*CGMGSN 965
E+ + + C + + ++ SS IL+AT + R G N
Sbjct: 588 DELLVKLLTEKYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILIATSIAA-RGLDVKGLN 646
Query: 966 FXINFD 983
IN++
Sbjct: 647 LVINYE 652
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 208 bits (507), Expect = 4e-52
Identities = 104/211 (49%), Positives = 145/211 (68%), Gaps = 3/211 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++ +GVA+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI
Sbjct: 430 IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDI 489
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTY 455
+F + + V+GG+ +Q +L+RG EIV+ TPGR+ID L G TNL+R TY
Sbjct: 490 RKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTY 549
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LV+DEADRM DMGFEPQI +I+ IRPDRQT+++SAT+P++V LA L V+I +G
Sbjct: 550 LVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGG 609
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N +I Q+V++ E E+ ++L LL E
Sbjct: 610 RSV-VNKDITQLVEIRPESERFSRLLELLGE 639
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|Rep:
LD33749p - Drosophila melanogaster (Fruit fly)
Length = 703
Score = 207 bits (505), Expect = 7e-52
Identities = 117/278 (42%), Positives = 166/278 (59%), Gaps = 3/278 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR--RGDGPIALVLAPTRELAQQIQQ 278
L QG +++G+AQTG+GKTLA++LP ++H Q R RG G LVLAPTRELA QI+
Sbjct: 317 LLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEM 375
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
++ ++ CV+GG + Q DLERG EI+I TPGRL D + ++ TYL
Sbjct: 376 EVKKYSFRG-MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYL 434
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
VLDEADRMLDMGFEPQIRK++ IRPDRQT+M SATWP VR+LA+ Y+ + +Q+ +GSL
Sbjct: 435 VLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSL 494
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDD 818
L+A H++ QI+ + + + +K N + + ++ + E++
Sbjct: 495 DLAATHSVKQIIKLME--DDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELT-- 550
Query: 819 MDGQLCACTXTNTARKG-*SXXPILKRVVSSILVATDV 929
+DG + C N + +K V ILVATDV
Sbjct: 551 LDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDV 588
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 205 bits (501), Expect = 2e-51
Identities = 104/211 (49%), Positives = 144/211 (68%), Gaps = 3/211 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++ +GVA+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI
Sbjct: 563 IMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDI 622
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTY 455
+F +R V+GG+ +Q +L+RG EIV+ TPGR+ID L G TNL+R T+
Sbjct: 623 RKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTF 682
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LV+DEADRM DMGFEPQI +II IRP+RQT+++SAT+P++V LA L V+I +G
Sbjct: 683 LVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGG 742
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N +I Q+V+V E ++ +L LL E
Sbjct: 743 RSV-VNKDITQLVEVRPESDRFLRLLELLGE 772
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 204 bits (498), Expect = 5e-51
Identities = 103/225 (45%), Positives = 149/225 (66%), Gaps = 1/225 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAS 287
QG +L+GVAQTG+GKTL+Y++P +H+++QP R +GP LVL PTRELA Q++ S
Sbjct: 341 QGMDLIGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELALQVEAECS 400
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
++ +++ CV+GG ++EQ + + +GV+I+IATPGRL D NL+ TYLVLD
Sbjct: 401 KYSYKG-LKSVCVYGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLD 459
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
EAD+MLD+GFE QI KI+ +RPDRQT+M SATWP +R+LA YL + + + +G+L L
Sbjct: 460 EADKMLDLGFEGQITKILLDVRPDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLV 519
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
A H + Q + V E EK L+QE +N P + + + K
Sbjct: 520 AVHTVKQDIIVTTEEEK----RTLIQEFLRNLAPEDKAIIFVSRK 560
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 203 bits (496), Expect = 8e-51
Identities = 105/232 (45%), Positives = 156/232 (67%), Gaps = 4/232 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++++GVA+TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI +
Sbjct: 509 AIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYRE 568
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
F + +R CV+GGAP EQ ++++ +IV+ATPGRLID L + TNL R T
Sbjct: 569 MRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVT 628
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINI 629
YLVLDEADRM DMGFEPQ+ KI++ IRPDRQT+++SAT+PK++ LA L + ++I +
Sbjct: 629 YLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEITV 688
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKE 785
G + A I QIV+V E K ++L +L E+ N++ AR L + +E
Sbjct: 689 GGRSVVA-AEIEQIVEVRSEDTKFHRLLEILGEL-YNREKDARTLIFVDRQE 738
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 202 bits (493), Expect = 2e-50
Identities = 104/211 (49%), Positives = 141/211 (66%), Gaps = 3/211 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++ +G+A+TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI
Sbjct: 538 IMSGRDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNC 597
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTY 455
F + + C GGA Q DL+RG EIV+ TPGR+ID L TNL+R TY
Sbjct: 598 RWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVTY 657
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
+V+DEADRM D+GFEPQI KII IRPDRQ +M+SAT+PK V +LA+ L ++ +G
Sbjct: 658 VVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATFPKNVEQLAKRVLRKPIECIVGG 717
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ A NI QI++ E +K KL +L QE
Sbjct: 718 -RGQAGGNIEQIIEFMDESDKLYKLLLLFQE 747
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 201 bits (490), Expect = 4e-50
Identities = 99/208 (47%), Positives = 141/208 (67%), Gaps = 1/208 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAS 287
QG +L+GVAQTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++
Sbjct: 278 QGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECC 337
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
++ +R+ CV+GG + EQ +L++GV+I+IATPGRL D NL+ TYLVLD
Sbjct: 338 KYSYKG-LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLD 396
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
EAD+MLDMGFEPQI KI+ +RPDRQT+M SATWP V +LA+ YL + + + +G+L L
Sbjct: 397 EADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLV 456
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEI 731
A ++ Q + V E EK + + LQ +
Sbjct: 457 AVSSVKQNIIVTTEEEKWSHMQTFLQSM 484
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 200 bits (489), Expect = 6e-50
Identities = 117/279 (41%), Positives = 170/279 (60%), Gaps = 3/279 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S G++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q
Sbjct: 298 SALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQE 357
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
A +F + C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+L
Sbjct: 358 AKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFL 417
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
V DEADRM DMGFE Q++ I D +RPDRQ LM+SAT+ ++V +LA D L D V+I G +
Sbjct: 418 VFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEV 477
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEIS-D 815
AN +I Q V V Q ++ KL+ L++ + + G +++ K + ++
Sbjct: 478 G-EANADIEQKVFVMQ--NQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMK 534
Query: 816 DMDGQLCACTXTNTARKG*SXXPILK-RVVSSILVATDV 929
D D L R +LK R S ILVATDV
Sbjct: 535 DFDIVLLHGDMLQAERN----ENLLKFRKKSQILVATDV 569
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 200 bits (487), Expect = 1e-49
Identities = 101/211 (47%), Positives = 141/211 (66%), Gaps = 3/211 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++ +G+A+TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A
Sbjct: 364 IMSGRDCIGIAKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEA 423
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTY 455
+G + V+GG+ Q +L+RG EIV TPGR+ID L G TNL+R TY
Sbjct: 424 KRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTPGRMIDILTTGGGKITNLRRVTY 483
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
+VLDEADRM DMGFEPQI +I+ +RPDRQT+M+SAT+P + LA L + V+I IG
Sbjct: 484 IVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAALENPVEIQIGG 543
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N +I Q+V++ E ++ ++ LL E
Sbjct: 544 KSV-VNSDIDQVVEIRPEEDRFLRVLELLGE 573
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 200 bits (487), Expect = 1e-49
Identities = 102/230 (44%), Positives = 147/230 (63%), Gaps = 2/230 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +++G+++TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A ++
Sbjct: 176 GSDMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQY 235
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ ++GGAP+R Q L R +IV+ TPGR+IDF+E G +L+ ++LV+DEA
Sbjct: 236 LRLVNIEIATIYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEA 295
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DR+++MGFE QI I + IRPDRQ L WSATWPK+V AE ++ +++ IGS QL+AN
Sbjct: 296 DRLMEMGFEQQIDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTAN 355
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQ--NQDPGARPLYLLKLKEKRXT 797
NI Q + +K++ L+ +G+ + D A+ L K+ T
Sbjct: 356 KNISQKFKIVP--TDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADT 403
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 199 bits (486), Expect = 1e-49
Identities = 95/206 (46%), Positives = 139/206 (67%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+N++GVA+TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+ ++
Sbjct: 225 GRNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKY 284
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ + + GG K Q ++L GV+I+IATPGRLI+ ++K TNLQRCTY+VLDEA
Sbjct: 285 AQLFQISVSALLGGENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEA 344
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
D+M +GFE QIR II QIRPD+Q L+++AT K++R+L D L D + I IG + N
Sbjct: 345 DQMFSLGFEYQIRSIIGQIRPDKQILLFTATMKKKIRQLCVDMLIDPIVITIGENENQVN 404
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEI 731
+I Q+ + + E +L LLQ +
Sbjct: 405 EDIKQLPVIVD--DDEGRLRWLLQNL 428
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 199 bits (485), Expect = 2e-49
Identities = 101/221 (45%), Positives = 147/221 (66%), Gaps = 3/221 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++L+G+A+TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI +
Sbjct: 543 AIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKD 602
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
+F S +R CV+GG EQ +L+RG EI++ TPGR+ID L + TNL+R T
Sbjct: 603 IRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVT 662
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
Y+VLDEADRM DMGFEPQ+ +IID +RPDRQT+M+SAT+P+++ LA L +++ +G
Sbjct: 663 YVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVG 722
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGA 755
+ + Q V + + K K LL+ +G Q+ G+
Sbjct: 723 GRSVVCK-EVEQHVVILNDDAKFFK---LLELLGIYQEAGS 759
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 198 bits (482), Expect = 4e-49
Identities = 101/211 (47%), Positives = 140/211 (66%), Gaps = 3/211 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++ +GVA+TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI +
Sbjct: 151 IMSGRDCIGVAKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDC 210
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTY 455
+G + V+GG+ Q DL+RG EIV TPGR+ID L G+ TNL+R TY
Sbjct: 211 KRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTY 270
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
+VLDEADRM DMGFEPQI +I+ +RPDRQT+M+SAT+P + LA L + ++I IG
Sbjct: 271 MVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATFPHTMEALARAALDNPIEIQIGG 330
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N +I Q+V++ E ++ ++ LL E
Sbjct: 331 KSV-VNSDIEQLVELRPEEDRFLRVLELLGE 360
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 194 bits (473), Expect = 5e-48
Identities = 102/191 (53%), Positives = 134/191 (70%), Gaps = 2/191 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVASE 290
G +LVG+A TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V
Sbjct: 147 GNDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKT 206
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ +R C +GG K +Q+R L GV+IVI TPGRL D L K +L YLVLDE
Sbjct: 207 SIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDE 264
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF PQI +IDQI +RQTLM+SATWPKEV+ LA +L D ++I +GS +L+
Sbjct: 265 ADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTG 324
Query: 651 NHNILQ-IVDV 680
+ N+ Q IV++
Sbjct: 325 SINVTQHIVNI 335
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|Rep:
RNA helicase, putative - Theileria annulata
Length = 976
Score = 193 bits (471), Expect = 9e-48
Identities = 108/212 (50%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++++G+A+TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI
Sbjct: 401 ALMCGRDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNE 460
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDF--LEKG-TTNLQRCT 452
+S+F + ++ ++GGA EQ L+RG EIVI TPGRLID L KG TNL+R T
Sbjct: 461 SSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTNLRRVT 520
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
+LVLDEADRM DMGF PQI I+ IRPDRQT ++SAT+P + LA+ L +QI +G
Sbjct: 521 FLVLDEADRMFDMGFAPQISAIVGNIRPDRQTALFSATFPIMIENLAKKILAKPLQIVVG 580
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
SA+ + Q V V E +K KL LL E
Sbjct: 581 QRGKSAS-QVDQHVLVLNEEKKLLKLLKLLGE 611
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 193 bits (470), Expect = 1e-47
Identities = 99/234 (42%), Positives = 150/234 (64%), Gaps = 5/234 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQI 272
L G++L+G+A+TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI
Sbjct: 148 LLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQI 207
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
V E G +++ CV+GG+ K Q + GV+IVI TPGRL D +E L +
Sbjct: 208 SDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVS 267
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINI 629
++VLDEADRMLDMGFE +R I+ RQ +M+SATWP +V KLA++++ + +++ I
Sbjct: 268 FVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVII 327
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKR 791
GS+ L+ANH+++QI++V E ++ +L LL++ ++Q L K++ +R
Sbjct: 328 GSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAER 381
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 191 bits (465), Expect = 5e-47
Identities = 91/185 (49%), Positives = 131/185 (70%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VGVA+TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + +
Sbjct: 99 GRDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRY 158
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ + GG K EQ + L+ GVEI+IATPGRL++ ++K TNL+RCTY+V+DEA
Sbjct: 159 AKIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEA 218
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
D+M MGFE QIR I+ QIRPDRQTL+++AT K+++ L D L + V I IG + AN
Sbjct: 219 DKMFSMGFEKQIRSIMQQIRPDRQTLLFTATLKKKIQNLVMDVLRNPVTIKIGG-ENQAN 277
Query: 654 HNILQ 668
+I Q
Sbjct: 278 EDIRQ 282
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 190 bits (464), Expect = 6e-47
Identities = 90/190 (47%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++GVA+TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ +F
Sbjct: 425 GRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKF 484
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVL 464
++ ++ C +GG+ Q +L+RGV +++ATPGRLID L T L+R T++VL
Sbjct: 485 SSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVL 544
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRM DMGFEPQI+KI QIRPD+QT+++SAT+P+++ +LA+ L + ++I +G + +
Sbjct: 545 DEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSV 604
Query: 645 SANHNILQIV 674
A+ +I+
Sbjct: 605 VASEISQEII 614
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 190 bits (463), Expect = 8e-47
Identities = 105/217 (48%), Positives = 143/217 (65%), Gaps = 4/217 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G + + +A+TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A +F
Sbjct: 92 GHDALVMAKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKF 151
Query: 294 GNS--SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVL 464
S R +FGG KR+Q + L G EIV+ATPGRL+D L K +TNL+R TYL L
Sbjct: 152 TKFGVSGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLAL 211
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIGSLQ 641
DEADRMLDMGFE +R I +RPDRQ +M+SAT P +++LA D L D V ++IG++
Sbjct: 212 DEADRMLDMGFEKIVRSICQAVRPDRQCVMFSATMPAAMQRLARDVLARDAVTVSIGNVG 271
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG 752
AN ++ Q+V V ++ + + L + +G D G
Sbjct: 272 -GANEDVRQVVYVFEDDAR--RAAWLFENLGDAVDEG 305
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 190 bits (462), Expect = 1e-46
Identities = 99/210 (47%), Positives = 138/210 (65%), Gaps = 3/210 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++L+G+A+TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI
Sbjct: 542 AIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVE 601
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 452
+F +R CV+GGA EQ +L+RG +IV+ TPGR+ID L + TNL+R T
Sbjct: 602 CKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVT 661
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
+LVLDEADRM DMGF PQI I+D IRPDRQT+M+SAT+P +V +A+ L ++I G
Sbjct: 662 FLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAG 721
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+ + +I Q V+V + +L LL
Sbjct: 722 GRSI-VSSDIEQFVEVRPTETRFRRLIELL 750
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 190 bits (462), Expect = 1e-46
Identities = 107/253 (42%), Positives = 159/253 (62%), Gaps = 9/253 (3%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQ 269
L G++L+ AQTGSGKT A+ P I I I R G P+A++L+PTRELA Q
Sbjct: 180 LAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQ 239
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
I A +F + V+ +GG P +Q R+LERGV+I++ATPGRL D LE+G +LQ
Sbjct: 240 IHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMV 299
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQI-RPD---RQTLMWSATWPKEVRKLAEDYLXDYV 617
+L LDEADRMLDMGFEPQIRKI+ Q+ P RQT+++SAT+P+E+++LA D+L +Y+
Sbjct: 300 RFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYI 359
Query: 618 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXT 797
+ +G + S+ I+Q V+ + +K + L LL +N + G + L L+ ++ K+
Sbjct: 360 FLAVGRVG-SSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKG- 417
Query: 798 XPEISDDMDGQLC 836
+D ++ LC
Sbjct: 418 ----ADSLENWLC 426
Score = 34.7 bits (76), Expect = 6.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 758 TIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
T++FVETK+ A G+PA +H D+ ++ +FK GR
Sbjct: 408 TLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGR 455
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 189 bits (460), Expect = 2e-46
Identities = 99/220 (45%), Positives = 142/220 (64%), Gaps = 10/220 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQ 275
GK+L+G AQTGSGKT A++LP + I I G G P A+++ PTREL QI
Sbjct: 307 GKDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIY 366
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
A +F +S+ VR V+GG QAR+LE+G +V+ TPGRL+DF+ KG NL + Y
Sbjct: 367 LEARKFASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKY 426
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
L+LDEADRMLDMGFEP+IRK++ + RQTLM+SAT+ E+++LA+++L +YV +
Sbjct: 427 LILDEADRMLDMGFEPEIRKLVTTFDMPEKGQRQTLMFSATFAAEIQQLAKEFLSEYVFV 486
Query: 624 NIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+G + AN +I Q V ++EK KL +L + G ++
Sbjct: 487 TVGRVG-GANSDITQEVHQVTKYEKREKLVEILNQAGTDR 525
Score = 34.3 bits (75), Expect = 8.3
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGR 901
+T++F+ETKR A +PA +H D+ ++ + +FK GR
Sbjct: 525 RTLVFLETKRSADFLAAYLSQEQYPATSIHGDRLQREREEALLDFKTGR 573
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 186 bits (453), Expect = 1e-45
Identities = 102/212 (48%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++++ +A+TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI
Sbjct: 421 ALMCGRDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVE 480
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCT 452
+S+ +R V+GG+P EQ L+RGVEIV TPGRLI+ L G TNL+R T
Sbjct: 481 SSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVT 540
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
++V+DEADRM D+GF PQI I+D IRPDRQT ++SAT+P + LA+ L +QI +G
Sbjct: 541 FVVIDEADRMFDLGFSPQISAIVDNIRPDRQTALFSATFPPTIEALAKKILTKPLQIIVG 600
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
SA+ + Q V V E +K L LL E
Sbjct: 601 ESGKSAS-QVDQHVMVLPERQKMYALLKLLGE 631
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 185 bits (451), Expect = 2e-45
Identities = 128/311 (41%), Positives = 176/311 (56%), Gaps = 20/311 (6%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRE 257
++L+ AQTGSGKT A++LP + I + P RR PI+LVLAPTRE
Sbjct: 218 RDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277
Query: 258 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTN 437
LA QI + A +F S VR V+GGA +Q RDLERG +++ATPGRL+D +E+G
Sbjct: 278 LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIG 337
Query: 438 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQ--IRPD--RQTLMWSATWPKEVRKLAEDYL 605
L C YLVLDEADRMLDMGFEPQIR+I++Q + P R T+M+SAT+PKE++ LA D+L
Sbjct: 338 LDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFL 397
Query: 606 XDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKE 785
+Y+ + +G + S + NI Q V +E +K + L LL G++ L L+ ++
Sbjct: 398 DEYIFLAVGRVG-STSENITQKVVWVEESDKRSFLLDLLNATGKDS------LTLVFVET 450
Query: 786 KRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRV---VSSILVATDVGCXRS*CGM 956
K+ + D + + ACT + R L + S ILVAT V R
Sbjct: 451 KKGA-DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA-RGLDIS 508
Query: 957 GSNFXINFDXP 989
INFD P
Sbjct: 509 NVKHVINFDLP 519
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 184 bits (449), Expect = 4e-45
Identities = 95/212 (44%), Positives = 140/212 (66%), Gaps = 4/212 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G + + A+TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI
Sbjct: 174 IMSGYDAIVCAKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEI 233
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTY 455
++FG +R+ VFGG Q L+RG EIV+ TPGR+ID L TNL+R T+
Sbjct: 234 NKFGKYLNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTF 293
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
+VLDEADRM DMGF PQI++II+ IRPD+Q +M+SAT+P V + A ++L ++I G
Sbjct: 294 VVLDEADRMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHAREFLKKPIEIICGG 353
Query: 636 LQLSANHNILQIVDVCQEHEK-ENKLNVLLQE 728
+ ++ I QIV+V + +K E ++++L++
Sbjct: 354 -RSQVSNTIEQIVEVIETKKKIERLISIVLEQ 384
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 184 bits (449), Expect = 4e-45
Identities = 112/267 (41%), Positives = 154/267 (57%), Gaps = 28/267 (10%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQV 281
L G +L+ +AQTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+
Sbjct: 109 LLSGDDLIAIAQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAE 168
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL- 458
++ Y ++ CV+GG ++ Q +ERGV+IVIATPGRL D NL+ TYL
Sbjct: 169 CKKYSYKDY-KSVCVYGGGDRKAQIHKVERGVDIVIATPGRLHDLQMNKLINLRSITYLV 227
Query: 459 -------------------------VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSA 563
VLDEADRMLD+GFEPQI KI+ +RPDRQT+M SA
Sbjct: 228 SCLHVFVFKMWDSRLRSVRLFLCNKVLDEADRMLDLGFEPQIMKILLDVRPDRQTVMTSA 287
Query: 564 TWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
TWP VR++A YL D + + +GSL L+A ++ Q I+ V E +K LN L +N
Sbjct: 288 TWPASVRRMATSYLKDPMMVYVGSLDLTAVSSVQQKILIVSAEEKKPYLLNFL-----KN 342
Query: 741 QDPGARPLYLLKLKEKRXTXPEISDDM 821
+P + L + ++ T ++S D+
Sbjct: 343 MEPQDKVLIFV---GRKLTADDLSSDL 366
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 184 bits (447), Expect = 7e-45
Identities = 93/212 (43%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++++ +A+TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++
Sbjct: 702 ALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSE 761
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
A + + +R V+GG+ Q L+RGVEI++ TPGR+ID L TNL R +
Sbjct: 762 ARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVS 821
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
++VLDEADR+LD+GFE QI I++ R D+QT M SAT+P ++ LA+ L ++I +G
Sbjct: 822 FVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVG 881
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N+NI Q V+V + +K +L LL E
Sbjct: 882 E-KGKTNNNIYQFVEVLEGGKKIYRLLKLLGE 912
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 183 bits (446), Expect = 9e-45
Identities = 100/210 (47%), Positives = 141/210 (67%), Gaps = 2/210 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L GK++VGVA+TGSGKT A+ +PAI H+ N R G LV++PTRELA QI
Sbjct: 146 LLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNL 202
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ ++ CV+GG PK EQ L++ ++V+ATPGRL+D L++G+ +L + YLVL
Sbjct: 203 IVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVL 261
Query: 465 DEADRMLDMGFEPQIRKIIDQI-RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL- 638
DEADRML+ GFE I+ II + RQTLM++ATWPKEVR+LA ++ + ++++IG+
Sbjct: 262 DEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTD 321
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQE 728
QL+AN I QIV+V KE KL LL++
Sbjct: 322 QLTANKRITQIVEVVDPRGKERKLLELLKK 351
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 183 bits (445), Expect = 1e-44
Identities = 99/208 (47%), Positives = 136/208 (65%), Gaps = 4/208 (1%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
Q K+ +A+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A
Sbjct: 743 QAKSKDSIAETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKP 802
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLV 461
F + VFGG + Q +L+RG EIV+ATPGRLID L TNL+R T +V
Sbjct: 803 FLKAYKYEIVAVFGGTGIKGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVV 862
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY-VQINIGSL 638
+DEADRM D+GFEPQI KI+ RPD+QT+++SAT+PK V LA+ + V++ +G+
Sbjct: 863 IDEADRMFDLGFEPQIAKILATTRPDKQTVLFSATFPKNVENLAKKLMRHKPVEVVVGA- 921
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLL 722
+ A NI Q++++ E + +L LL
Sbjct: 922 RGQACTNITQLIEIRDESTRLFRLLELL 949
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 182 bits (443), Expect = 2e-44
Identities = 102/230 (44%), Positives = 143/230 (62%), Gaps = 6/230 (2%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++L+GVA+TGSGKTLA+ +P I H+ +Q P++ DGPI L+LAPTREL+ QI F
Sbjct: 546 GRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVNELKPF 605
Query: 294 GNSSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGT---TNLQRCTYLV 461
N+S + C +GG P +Q ++R G+ I+ AT GRLID L+ + + +R TY+V
Sbjct: 606 LNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYVV 665
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRM DMGFEPQ+ KI+ IRPDRQT+++SAT+PK + LA L ++ IG
Sbjct: 666 LDEADRMFDMGFEPQVMKILASIRPDRQTILFSATFPKTMAALARKALDKPAEVIIGGRS 725
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQ--NQDPGARPLYLLKLKE 785
A I V +EK K+ LL +GQ + D A+ L + +E
Sbjct: 726 KVAPEITQHITIVPPSYEK--KIAKLLHHLGQTFSDDENAQVLIFTERQE 773
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 182 bits (442), Expect = 3e-44
Identities = 90/215 (41%), Positives = 139/215 (64%), Gaps = 3/215 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ G++++G+A+TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI +
Sbjct: 436 AIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKE 495
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
F +R +C GG+ E +++G E+VI TPGR+ID L TN++R T
Sbjct: 496 CQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTT 555
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
Y+V+DEADRM DMGFEPQ+ KII+ +RP Q +++SAT+PK + LA L ++I +G
Sbjct: 556 YIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATFPKTMESLARRILVKPLEITVG 615
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ 737
+ A I Q V+V K +L +L E+G+
Sbjct: 616 GRSVVA-PEIDQRVEVRDGDTKFTRLLEILGEMGE 649
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 180 bits (439), Expect = 7e-44
Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 6/197 (3%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQ 266
L G++ +GV+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177
Query: 267 QIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
QI+ ++ + Y ++ C++GG + EQ GVEIVIATPGRL D G +L
Sbjct: 178 QIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLAS 236
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
TY+VLDEADRMLDMGFE IR+I+ +IRPDR + SATWP+ VRKL + Y + V
Sbjct: 237 VTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAV 296
Query: 627 IGSLQLSANHNILQIVD 677
GSL L++ ++ Q +
Sbjct: 297 NGSLDLTSCKSVTQFFE 313
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 180 bits (437), Expect = 1e-43
Identities = 95/221 (42%), Positives = 144/221 (65%), Gaps = 8/221 (3%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQ 269
++ + ++++ AQTGSGKT A+++P I H+ NQ + P L+LAPTRELA Q
Sbjct: 217 AILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQ 276
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
I + +F ++ +R+ V+GGA Q R+++ G +++ATPGRL+DF+EK +L+ C
Sbjct: 277 ILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFC 336
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIRP----DRQTLMWSATWPKEVRKLAEDYLXDYV 617
Y+VLDEADRMLDMGFEPQIRKII++ +RQTLM+SAT+PKE++KLA D+L +Y+
Sbjct: 337 KYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYI 396
Query: 618 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
+ +G + S + +I Q + + EK N L + N
Sbjct: 397 FMTVGRVG-STSDSIKQEIIYMTDVEKLNYLKNIFNTTAPN 436
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 178 bits (433), Expect = 3e-43
Identities = 100/243 (41%), Positives = 150/243 (61%), Gaps = 14/243 (5%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTR 254
+ G++L+ AQTGSGKT A+++P + + + PP RR P+ LVLAPTR
Sbjct: 329 IINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTR 388
Query: 255 ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
ELA QI + A +F S +R ++GG EQ R+L+RG +++ATPGRL D + +G
Sbjct: 389 ELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKV 448
Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIR----PDRQTLMWSATWPKEVRKLAEDY 602
L+ +LVLDEADRMLDMGFEPQIR+I++Q+ RQTLM+SAT+PK++++LA D+
Sbjct: 449 GLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDF 508
Query: 603 LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
L +Y+ + +G + S + NI Q + E +K + L LL I + L L+ ++
Sbjct: 509 LSNYIFLAVGRVG-STSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVE 567
Query: 783 EKR 791
K+
Sbjct: 568 TKK 570
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 177 bits (432), Expect = 5e-43
Identities = 96/205 (46%), Positives = 136/205 (66%), Gaps = 12/205 (5%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRE 257
+L K++VG+A+TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRE
Sbjct: 206 ALLSKKDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRE 265
Query: 258 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTT 434
LAQQ + S FG +++ C+FGG K QAR+L ++ +V+ TPGR +D + G
Sbjct: 266 LAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGEL 325
Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQI---RPDRQTLMWSATWPKEVRKLAEDYL 605
+L +YLVLDEADRMLD GFE IR+II + RQT+M+SATWP+ VR+LA +L
Sbjct: 326 DLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFL 385
Query: 606 XDYVQINIGSLQLSANHNILQIVDV 680
+ ++I +GS +LSAN I QIV+V
Sbjct: 386 NNPLRITVGSDELSANKRIEQIVEV 410
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 177 bits (430), Expect = 8e-43
Identities = 97/234 (41%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQI 272
++L+ AQTGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI
Sbjct: 169 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 228
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
+ A F + +R+ CV+GG+ Q +++ +G +I++ATPGRL+ F EK +L
Sbjct: 229 YEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVR 288
Query: 453 YLVLDEADRMLDMGFEPQIRKIID--QIRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
YL+ DEADRMLDMGFEPQIR+I + ++ P RQTLM+SAT+PK++++LA D+L DYV
Sbjct: 289 YLIFDEADRMLDMGFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADFLDDYVF 348
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLK 782
I +G A + I + E+E K +L +G+ G + + ++ K
Sbjct: 349 ITVG----RAGSTVESIQQIILWVEEEIKQEAILDVLGEFAGKGQKTVIFVETK 398
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase -
Chironomus tentans (Midge)
Length = 776
Score = 177 bits (430), Expect = 8e-43
Identities = 102/244 (41%), Positives = 152/244 (62%), Gaps = 15/244 (6%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTR 254
+ G++L+ AQTGSGKT A+++P + + +N+P RR P+ LVLAPTR
Sbjct: 301 ILSGRDLMSCAQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTR 360
Query: 255 ELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
ELA QI + A +F S +R ++GG EQ R+L+RG +++ATPGRL D + +G
Sbjct: 361 ELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKI 420
Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIID--QIRP--DRQTLMWSATWPKEVRKLAEDY 602
L+ +LVLDEADRMLDMGFEPQIR II+ + P RQTLM+SAT+PK +++LA D+
Sbjct: 421 GLENLRFLVLDEADRMLDMGFEPQIRHIIENRDMPPTGQRQTLMFSATFPKNIQELASDF 480
Query: 603 LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ-NQDPGARPLYLLKL 779
L +Y+ + +G + S + NI Q + E+EK + L LL + + + D L L+ +
Sbjct: 481 LSNYIFLAVGRVG-STSENITQTILWVNENEKRSYLLDLLSRLREGSPDYSPDSLTLIFV 539
Query: 780 KEKR 791
+ K+
Sbjct: 540 ETKK 543
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 177 bits (430), Expect = 8e-43
Identities = 92/210 (43%), Positives = 138/210 (65%), Gaps = 8/210 (3%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQ 278
G +++G+AQTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+
Sbjct: 131 GYDVIGIAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIES 190
Query: 279 VASEFGNSSYVRNTCVFGGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
F + ++ C++GG R+ Q +L R I++ATPGRL+DFL +G T L +Y
Sbjct: 191 EIQLFTQNYRLKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSY 250
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINIG 632
LV+DEADR+L++GFE IR+I+ QIR DRQT+ +SATWPK V+ LA D+ + + IG
Sbjct: 251 LVIDEADRLLELGFEDTIREIVQQIRFDRQTVFFSATWPKAVKDLAFDFCQYSPIYVQIG 310
Query: 633 SLQLSANHNILQ-IVDVCQEHEKENKLNVL 719
L+ N NI Q I+ + Q+ + + L++L
Sbjct: 311 KSNLTINKNIDQEIICLFQKDKLQKLLDIL 340
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 176 bits (429), Expect = 1e-42
Identities = 89/212 (41%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++++ +A+TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++
Sbjct: 602 ALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNE 661
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCT 452
AS + + ++ V+GG+ Q L++GVEI++ TPGR+ID L TNL R +
Sbjct: 662 ASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRAS 721
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
++VLDEADR+LD+GFE QI I++ R D+QT M SAT+P ++ LA+ L ++I +G
Sbjct: 722 FIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATFPNYIQNLAKKLLYKPIEIIVG 781
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N+NI Q V+V +E +K +L LL E
Sbjct: 782 E-KGKTNNNIYQFVEVLEEKKKLFRLLKLLGE 812
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 176 bits (429), Expect = 1e-42
Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 17/190 (8%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-----QQ 278
G+N + +AQTGSGKTLAY+LPA+VH+ I P L+L PTREL QI Q
Sbjct: 96 GRNALAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQL 155
Query: 279 VASEFGNSSY-----------VRNTCVFGGAP-KREQARDLERGVEIVIATPGRLIDFLE 422
+ +GN ++ C++GG P K++Q +++G+ +++ATPGRLI+ ++
Sbjct: 156 IEFYYGNKKQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGIHVIVATPGRLIELID 215
Query: 423 KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDY 602
+G NL + T L+LDEADRMLDMGFEPQ+R I+ IR DRQT++ SATWP EV++L++++
Sbjct: 216 EGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILLSATWPNEVQQLSKEF 275
Query: 603 LXDYVQINIG 632
D + + IG
Sbjct: 276 CYDPILVKIG 285
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 176 bits (428), Expect = 1e-42
Identities = 88/212 (41%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++++ +A+TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++
Sbjct: 756 ALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNE 815
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
A + + + V+GG+ Q + L++GVEI++ TPGR+ID L TNL R +
Sbjct: 816 AKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVS 875
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
++VLDEADR+LD+GFE QI I+ R D+QT M SAT+P ++ +A+ L ++I +G
Sbjct: 876 FVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVG 935
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ N+NI Q V++ +E +K +L LL E
Sbjct: 936 E-KGKTNNNIYQFVEIIEESKKVFRLLKLLGE 966
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_36, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1127
Score = 176 bits (428), Expect = 1e-42
Identities = 112/303 (36%), Positives = 166/303 (54%), Gaps = 8/303 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQI 272
+ G +L+GVA+TGSGKT Y+LP ++ I Q R R +GP L+LAPTREL QI
Sbjct: 134 ILSGYDLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQI 193
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
Q S F + + +GG + +QA+ ++R +I++A PGRL DFL++G +L + T
Sbjct: 194 AQQVSLFMKPNNLTVATAYGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSKVT 253
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDY-LXDYVQINI 629
YLV+DEADR+LDMGFE +R I+ + R DRQT+ +SATWPK VR L+ D+ D + + +
Sbjct: 254 YLVIDEADRLLDMGFEDDVRFIVQRTRQDRQTVFFSATWPKAVRNLSLDFCAEDPIYVQV 313
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEI 809
G L+ N NI Q + ++K L +L ++ N +L E R + ++
Sbjct: 314 GRSNLTVNKNIDQEIICLYNNQKLQTLLDILDQLKINDK-------VLIFAETRISCEQL 366
Query: 810 SDDM--DGQLCACTXTN-TARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINF 980
S DM +G N T + S K+ + +L ATD+ R IN+
Sbjct: 367 SVDMTQEGYYAVALHGNKTQGQRDSIMECYKKGDTKLLCATDL-ASRGLDVSDITVVINY 425
Query: 981 DXP 989
D P
Sbjct: 426 DFP 428
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 176 bits (428), Expect = 1e-42
Identities = 93/213 (43%), Positives = 141/213 (66%), Gaps = 7/213 (3%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
++ G++L+G+++TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI +
Sbjct: 310 AIMSGRDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINE 369
Query: 279 VASEFGNSSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QR 446
+F +R C GG+ ++Q DL+RGVEIV+ATPGRLID L + L +R
Sbjct: 370 EVEKFTKQDRSIRTICCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKR 429
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
T++V+DEADR+ DMGFEPQI +I+ +RPD+Q +++SAT+P ++R A L D + +
Sbjct: 430 ITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAARILTDPLTVT 489
Query: 627 IGSLQLSANHNILQIVDV-CQEHEKENKL-NVL 719
I S L N N+ Q + E++K N+L N+L
Sbjct: 490 INSNNL-VNENVNQSFYIEDNENDKFNRLVNIL 521
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 175 bits (427), Expect = 2e-42
Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 11/220 (5%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELA 263
+ Q ++L+ AQTGSGKT A+++P + + P + + P+AL+LAPTRELA
Sbjct: 245 IMQRRDLMACAQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELA 304
Query: 264 QQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 443
QI A +F S VR V+GG R Q +D+ +G +++ATPGRL D LE+ L
Sbjct: 305 VQIYDEARKFSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLD 364
Query: 444 RCTYLVLDEADRMLDMGFEPQIRKIIDQIR----PDRQTLMWSATWPKEVRKLAEDYLXD 611
YLVLDEADRMLDMGFEPQIRKI++Q RQTLM+SAT+P+E++ LA D+L D
Sbjct: 365 CIRYLVLDEADRMLDMGFEPQIRKIVEQTNMPPPGQRQTLMFSATFPREIQMLASDFLKD 424
Query: 612 YVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
Y+ + +G + S + NI Q + E+EK + L +L +I
Sbjct: 425 YLFLRVGKVG-STSQNITQRIVYVDENEKRDHLLDILTDI 463
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 175 bits (426), Expect = 2e-42
Identities = 102/234 (43%), Positives = 150/234 (64%), Gaps = 21/234 (8%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLA 245
L +GK++V +A+TGSGKT ++LPA+ I P ++ DG P +VLA
Sbjct: 120 LLKGKDVVAIAKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLA 179
Query: 246 PTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK 425
PTRELA QI ++F ++ R+ ++GGA K +Q R L G ++V+ATPGRL DFLE
Sbjct: 180 PTRELAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEP 239
Query: 426 --GTT---NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKL 590
G T + + Y+VLDEADRMLDMGFEPQI+KI RQT+M++ATWPK V+K+
Sbjct: 240 PPGFTAPVSAVKAAYVVLDEADRMLDMGFEPQIKKIFKLCPSARQTVMFTATWPKGVQKI 299
Query: 591 AEDYLXD--YVQINIGSLQLSANHNILQIVDVCQEHEKENK-LNVLLQEIGQNQ 743
A+ + ++QI G +L+AN +I Q V+V +E EK ++ + +L +E+G+N+
Sbjct: 300 ADAFTTKPIHIQIGSGGDKLTANKSITQTVEVVEEEEKFDRCVAILKKELGKNE 353
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 175 bits (426), Expect = 2e-42
Identities = 87/220 (39%), Positives = 144/220 (65%), Gaps = 5/220 (2%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
++ G++++G+++TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI +
Sbjct: 289 AIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHE 348
Query: 279 VASEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QR 446
++F + + +R+ C GG+ ++Q DL+RG EIV+ATPGR ID L L +R
Sbjct: 349 EVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKR 408
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
T++V+DEADR+ D+GFEPQI +I+ +RPD+Q +++SAT+P ++R A L + I
Sbjct: 409 ITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISIT 468
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
I S + N N+ Q +C H ++ K + L+Q I + +
Sbjct: 469 INSKGM-VNENVKQKFRIC--HSEDEKFDNLVQLIHERSE 505
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 175 bits (426), Expect = 2e-42
Identities = 100/240 (41%), Positives = 143/240 (59%), Gaps = 13/240 (5%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELA 263
L Q K++VG+A+TGSGKT A+ LPA+ H+ + + +G LV+APTRELA
Sbjct: 193 LLQNKDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELA 252
Query: 264 QQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTN 437
Q ++ ++ G S + C++GG K+EQ R L + V IV+ TPGR++D G+ +
Sbjct: 253 IQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLD 312
Query: 438 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIR---PDRQTLMWSATWPKEVRKLAEDYLX 608
L TYLVLDEADRMLD GFEP IR II + R T M+SATWP VR LAE ++
Sbjct: 313 LSGVTYLVLDEADRMLDKGFEPDIRAIIGMCKSREEGRHTSMFSATWPPAVRGLAESFMN 372
Query: 609 DYVQINIGSLQLSANHNILQIVDVCQE-HEKENKLNVLLQEIGQNQDPGARPLYLLKLKE 785
V++ +GS +LSAN + Q V+V + + KE +LN L+ + + ++ L KE
Sbjct: 373 GPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLNDFLRSVNAQRSKDKILIFALYKKE 432
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 175 bits (425), Expect = 3e-42
Identities = 105/229 (45%), Positives = 145/229 (63%), Gaps = 16/229 (6%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPT 251
+L ++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 172 TLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231
Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKG 428
RELA QI + A++F S ++ ++GG R+Q L G I+IATPGRLID +E+G
Sbjct: 232 RELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG 291
Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAED 599
L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+PKE++ LA+D
Sbjct: 292 FIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKD 351
Query: 600 YLXD-YVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
+L D Y+ + +G + S + NI Q ++ V + ++ N + +L+ E +N
Sbjct: 352 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEILMNEHSEN 399
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 174 bits (424), Expect = 4e-42
Identities = 109/299 (36%), Positives = 161/299 (53%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ K+LVG+AQTG+GKT A+ LP I + P +G A++L+PTRELA QI +
Sbjct: 136 AVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEA 195
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
FG + T GGAP R+Q RDL +GV+I++ATPGRL D +++ L +LV
Sbjct: 196 FVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLV 255
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD+MLD+GF P +++II ++ DRQTL++SAT KE++KL E YL D VQ+++
Sbjct: 256 LDEADQMLDIGFLPAVKRIISKVNKDRQTLLFSATMSKEIKKLTETYLTDPVQVSV---- 311
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDM 821
N + +I K+NK + LQ I + +P R + + K +
Sbjct: 312 TPENSTVDKIEQSLMHLSKQNK-GLALQRI-ISANPKKRVIVFSRTKHGSDKLVKWLGTQ 369
Query: 822 DGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
+ A + + K+ + IL+ATD+ R G INFD P P
Sbjct: 370 NIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDIAA-RGIDIPGIEIVINFDLPNVP 427
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 173 bits (421), Expect = 1e-41
Identities = 95/227 (41%), Positives = 149/227 (65%), Gaps = 15/227 (6%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPT 251
++ G++L+ AQTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PT
Sbjct: 234 TVLNGRDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPT 293
Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 431
RELA Q + + +F + +R ++GG+ R Q DL+RG +I++ATPGRL D +++G
Sbjct: 294 RELAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGK 353
Query: 432 TNLQRCTYLVLDEADRMLDMGFEPQIRKII-DQIRP----DRQTLMWSATWPKEVRKLAE 596
NL+ +L+LDEADRMLDMGF PQIR+I+ D P RQT+M+SAT+P+E+++LA+
Sbjct: 354 VNLKLIKFLILDEADRMLDMGFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQLAK 413
Query: 597 DYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ 737
D+L +Y+ + +G + ++ +I+Q V +E K L LL E G+
Sbjct: 414 DFLHNYIFLTVGRVGATSG-SIVQRVVYAEEDHKPRLLVKLLLEQGE 459
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 173 bits (420), Expect = 1e-41
Identities = 87/207 (42%), Positives = 137/207 (66%), Gaps = 5/207 (2%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
++ G++++G+++TGSGKT+++ILP + I Q P+ + GP+ L+L+PTRELA QI +
Sbjct: 270 AIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHE 329
Query: 279 VASEFGNSS-YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QR 446
++F + +R+ C GG+ + Q D++RGVEIVIATPGR ID L + NL +R
Sbjct: 330 EVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKR 389
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
++V+DEADR+ D+GFEPQ+ +I+ IRPD+Q +++SAT+P +++ A L D V I
Sbjct: 390 IVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKSFASKILHDPVYIT 449
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENK 707
+ S L N NI Q V++ E + K
Sbjct: 450 VNSKSL-INENIEQKVEIFSNEEDKFK 475
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 170 bits (414), Expect = 7e-41
Identities = 96/218 (44%), Positives = 138/218 (63%), Gaps = 14/218 (6%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTREL 260
+G++L+ AQTGSGKT ++ P + P R P ALVLAPTREL
Sbjct: 190 KGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTREL 249
Query: 261 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 440
A QI + A +F S+VR V+GGAP Q R+++RG ++++ATPGRL D LE+G +L
Sbjct: 250 ATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSL 309
Query: 441 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIR----PDRQTLMWSATWPKEVRKLAEDYLX 608
YLVLDEADRMLDMGFEPQIR I+++ +RQTLM+SAT+P +++ LA D+L
Sbjct: 310 ANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLD 369
Query: 609 DYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+Y+ +++G + S + NI Q + + +K++ L LL
Sbjct: 370 NYIFLSVGRVG-STSENITQRILYVDDMDKKSALLDLL 406
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 169 bits (411), Expect = 2e-40
Identities = 95/215 (44%), Positives = 137/215 (63%), Gaps = 7/215 (3%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L G+++VG+A+TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q +
Sbjct: 199 LLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENL 256
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ + ++ V+GGAPK EQAR + ++I TPGRL+D + G+ + + YLVL
Sbjct: 257 NSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVL 315
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPD------RQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
DEADRMLD GFE IR II PD RQT+ +SATWP+ VR LA +L D V+I
Sbjct: 316 DEADRMLDTGFEQDIRNIISH-TPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKIT 374
Query: 627 IGSLQLSANHNILQIVDVCQE-HEKENKLNVLLQE 728
IGS +L+A+ NI QIV++ + KE L+ LL++
Sbjct: 375 IGSDELAASQNITQIVEILDDPRSKERMLDNLLRK 409
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 169 bits (410), Expect = 2e-40
Identities = 87/216 (40%), Positives = 135/216 (62%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++++G A TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q
Sbjct: 135 ILSGRDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYEAA-AVILSPTRELAYQTHIEC 193
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ + ++ C+ GG Q R ++ G ++IATPGR ID L N+++ +YLV+
Sbjct: 194 QKIFSLMDKKSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVI 253
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRM D+GFEPQ+ +I +++R DRQTLM+SAT+P V ++A L + ++I +G L+
Sbjct: 254 DEADRMFDLGFEPQVIRIAERMRKDRQTLMFSATFPHTVERIARKLLQNSIEIVVG-LRN 312
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG 752
NI Q + V E +NK N LL+ +G G
Sbjct: 313 VVTPNINQSILVTNE---DNKFNSLLKILGDYTTQG 345
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 168 bits (408), Expect = 4e-40
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 12/216 (5%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 278
++L+ AQTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI
Sbjct: 195 RDLMACAQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYG 254
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
A +F + VR V+GGA R Q +L RG ++++ATPGRL+D +G +L
Sbjct: 255 EARKFTYHTPVRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFL 314
Query: 459 VLDEADRMLDMGFEPQIRKII---DQIRP---DRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
+LDEADRMLDMGFEPQIR I+ D P RQTL++SAT+P E+++LA +++ +
Sbjct: 315 ILDEADRMLDMGFEPQIRMIVQGPDSDMPRAGQRQTLLYSATFPVEIQRLAREFMCRHSF 374
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ +G + S NI Q V ++ +K L LL+E
Sbjct: 375 LQVGRVG-STTENITQDVRWIEDPDKRQALLTLLRE 409
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21; n=8;
Viridiplantae|Rep: DEAD-box ATP-dependent RNA helicase 21
- Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 168 bits (408), Expect = 4e-40
Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 20/229 (8%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQV 281
Q ++++G+A+TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++
Sbjct: 349 QQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEE 408
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+F + R T + GG EQ + +G EIVIATPGRLID LE+ L +C Y+V
Sbjct: 409 TVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVV 468
Query: 462 LDEADRMLDMGFEPQIRKIID-----QIRPD------------RQTLMWSATWPKEVRKL 590
LDEADRM+DMGFEPQ+ ++D ++P+ R T M+SAT P V +L
Sbjct: 469 LDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERL 528
Query: 591 AEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQ 737
A YL + V + IG+ + + I Q V + +E EK +L LL E+G+
Sbjct: 529 ARKYLRNPVVVTIGTAGKTTD-LISQHVIMMKESEKFFRLQKLLDELGE 576
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 167 bits (407), Expect = 5e-40
Identities = 80/153 (52%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQV 281
+ QG +L+GVAQTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+
Sbjct: 275 ILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAE 334
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
SE+ +++ C++GG + Q +DL +G +I+IATPGRL D L+ TYLV
Sbjct: 335 CSEYSYRG-LKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLV 393
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWS 560
LDEAD+MLDMGFEPQI KI+ +RPDRQT+M S
Sbjct: 394 LDEADKMLDMGFEPQIMKILLDVRPDRQTVMTS 426
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 167 bits (407), Expect = 5e-40
Identities = 93/214 (43%), Positives = 137/214 (64%), Gaps = 5/214 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++L+ +QTGSGKT A++LP I + P + L PTRELA QI +
Sbjct: 155 ILNGEDLIVTSQTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEET 211
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F + ++ TCVFGGAP EQ R+L RG++IVIATPGRLID L++ L +L+L
Sbjct: 212 RKFCKGTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLIL 271
Query: 465 DEADRMLDMGFEPQIRKIID--QIRP--DRQTLMWSATWPKEVRKLAEDYL-XDYVQINI 629
DEADRMLDMGFEPQ++++I+ + P DRQT+++SAT+P VR LA D++ Y +I++
Sbjct: 272 DEADRMLDMGFEPQMQEVINGWDMPPADDRQTMLFSATFPDAVRNLARDFMRPKYCRISV 331
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
G A +I Q C E +K ++L +++E+
Sbjct: 332 G--MQDAPKSIEQRFIYCSEMDKFSELLGVIKEV 363
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 167 bits (407), Expect = 5e-40
Identities = 91/280 (32%), Positives = 157/280 (56%), Gaps = 4/280 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQ 278
++ G++++G+++TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI +
Sbjct: 285 AIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINE 344
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ---RC 449
+ + + + C GG+ ++Q L+ GVEI IATPGR ID L NL R
Sbjct: 345 EVQKLISDLDISSICCTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRI 404
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
+++V+DEADR+ D GFEPQI ++ +RPDRQ +++SAT+P +V A +L +QI +
Sbjct: 405 SFVVMDEADRLFDFGFEPQIASVLRTVRPDRQCVLFSATFPSKVSNFASRFLDSPLQITV 464
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEI 809
+ + N I Q +C + + K + L ++ ++ + + + ++ +
Sbjct: 465 NA-EGMVNERINQKFTICSDESDKFKELLSLLKVFNSETVDEKTIIFVSSQQICDIIEKR 523
Query: 810 SDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
D +L + + + K+ +SIL+ T+V
Sbjct: 524 LTDYSEKLYSIHAGRPYNERRQNLELFKKTSNSILLCTEV 563
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 167 bits (407), Expect = 5e-40
Identities = 115/303 (37%), Positives = 156/303 (51%), Gaps = 30/303 (9%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQ 278
Q ++++GVA+TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++
Sbjct: 427 QNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEE 486
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+FG +R V GG + +Q L G EIVIATPGRLID LE L RCTY+
Sbjct: 487 ETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYV 546
Query: 459 VLDEADRMLDMGFEPQIRKIIDQI-----RPD---------------------RQTLMWS 560
VLDEADRM+DMGFEP ++KI++ + +PD RQT+M++
Sbjct: 547 VLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFT 606
Query: 561 ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
AT P V +LA YL + IGS + + Q V + E EK KL +L+ Q
Sbjct: 607 ATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRKKLLAILE---QG 662
Query: 741 QDPGARPLYLLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVA 920
DP + + K+ + + M C + LK ILVA
Sbjct: 663 FDPPI--IIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA 720
Query: 921 TDV 929
TDV
Sbjct: 721 TDV 723
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_36, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 813
Score = 167 bits (406), Expect = 7e-40
Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +G++++ +A+TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ
Sbjct: 466 ILEGRDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQ--- 519
Query: 285 SEFGNSSYVRNTCVFGGAPKR---------EQARDLERGVEIVIATPGRLIDFLEKGTTN 437
S++ + R CV+GG K +++R+ ++I+TPGRL+DF++ G
Sbjct: 520 SQY--ELFTRTCCVYGGVFKNLQYSEILGIKESRNKINLPSVIISTPGRLLDFMKDGLP- 576
Query: 438 LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDY 614
L T +VLDEADRMLDMGFE QI +I+ +R DRQTL +SATWP EV++LA D
Sbjct: 577 LNSITQVVLDEADRMLDMGFEDQITQILSAVRDDRQTLFFSATWPNEVQRLANSLCNQDP 636
Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEKE 701
+ I +G LS N NI Q V + E++ E
Sbjct: 637 IMIQLGEQGLSVNKNIQQEVIIVYENKFE 665
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 865
Score = 166 bits (404), Expect = 1e-39
Identities = 90/235 (38%), Positives = 146/235 (62%), Gaps = 1/235 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G NLVG+AQTGSGKT AY++PAI ++ NQ R GP L++A TREL +QIQ+
Sbjct: 523 GMNLVGIAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEIL 579
Query: 294 GNSSYVRNTCVFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
++ V+ +GG +R+Q RD+ G +I+ A PGRL+DF+ + +V+DE
Sbjct: 580 TKNTSVKVAVAYGGENNRRQQIRDIA-GADIIAAAPGRLLDFIRNNNIKPESIGIVVIDE 638
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
AD+M+ FEPQ + +I + + QTLM+SATWP EV+ +A++YL +Y+++ + S +L+
Sbjct: 639 ADKMVSNDFEPQCKAVISRCPKNIQTLMFSATWPDEVQFMAQNYLGEYIRVIVNSRELTI 698
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISD 815
N NI Q+V + ++ + +L +++ I +++ + P ++ K KR T E D
Sbjct: 699 NINIKQMV-IEKDRDSLRQLGEIVEGIKRSKGNESYPKIIIFCKTKR-TVEEAHD 751
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 165 bits (401), Expect = 3e-39
Identities = 87/205 (42%), Positives = 128/205 (62%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK++V AQTG+GKTLA++LP I ++ +P R G AL+L PTRELA QI + +
Sbjct: 39 GKDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQINEALLQI 95
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ +R GG +R Q RD+ G IV+ATPGRL DF+ +G NL L+LDE+
Sbjct: 96 ARGTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDES 155
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF P I++II + +RQTL++SAT V++L E ++ + V+I +GS+ +
Sbjct: 156 DRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSE 215
Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
L + +V Q+ K L ++L+E
Sbjct: 216 QVDLHLYEVDQD-RKFGLLEMMLRE 239
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 164 bits (399), Expect = 5e-39
Identities = 85/207 (41%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAS 287
++++G+A+TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A
Sbjct: 180 RDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQ 239
Query: 288 EFGNSSY----VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
+ N ++ +R + GG +QA L +GVEI+IATPGR+ D LEK T L +C+Y
Sbjct: 240 KLLNKTHELKRIRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSY 299
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPD--RQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
++LDEADRM+D+GF+ + I+DQI P+ R T M+SAT KE+ +A+ YL + + I
Sbjct: 300 VILDEADRMIDLGFQDSLNFILDQIPPEIQRTTHMFSATMQKELENIAKRYLNSPINVTI 359
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKL 710
G + + +I QI++ E++K++ L
Sbjct: 360 GDIG-AGKKSIQQILNFISENKKKSTL 385
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 163 bits (395), Expect = 1e-38
Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 1/177 (0%)
Frame = +3
Query: 213 RGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIA 392
R L+L PTREL Q+ F + +++ V+GG PK Q +L++G +I++A
Sbjct: 198 RASDTYGLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVA 257
Query: 393 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWP 572
TPGRL+DFLE G NL +C Y+V+DEADR+LDMGFE Q+RKI+ Q+ ++Q L +ATWP
Sbjct: 258 TPGRLLDFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWP 317
Query: 573 KEVRKLAEDY-LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
++VRKLA D+ D V+I IG +L+AN NI Q V + + + KL L+E +N
Sbjct: 318 EQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYEN 374
Score = 46.0 bits (104), Expect = 0.003
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI 191
GK+L+GVA+TGSGKTLA++LP +HI
Sbjct: 98 GKDLIGVAETGSGKTLAFVLPCFMHI 123
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 162 bits (394), Expect = 2e-38
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 30/235 (12%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQ 278
Q ++++GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEE 396
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
++FG ++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY+
Sbjct: 397 ETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYV 456
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPD--------------------------RQTLMWS 560
+LDEADRMLDMGFEP ++K+++ + PD RQT+M++
Sbjct: 457 ILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFT 515
Query: 561 ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
AT + +LA YL ++IGS + Q+V + E K KL +L+
Sbjct: 516 ATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEVLE 569
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 161 bits (391), Expect = 4e-38
Identities = 85/209 (40%), Positives = 124/209 (59%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S +G++++G+AQTGSGKT A+ LP + I RR AL+LAPTRELA QI+Q
Sbjct: 120 SQLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQT 179
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
S+++ V GG K Q + + G++++IATPGRL D + G +L + +LV
Sbjct: 180 IRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLV 239
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRMLDMGF +++I +RQT ++SAT PKE+ LAE L D V++ +
Sbjct: 240 LDEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQG 299
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQE 728
+A+ I Q+V EK L+ +L +
Sbjct: 300 ATAS-EITQVVHPVPTKEKRRLLSAMLTD 327
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 161 bits (390), Expect = 6e-38
Identities = 91/229 (39%), Positives = 134/229 (58%), Gaps = 22/229 (9%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQ 275
L Q K+L+G+A+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ
Sbjct: 283 LLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQ 342
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
++F R V GG EQ+ + +G IV+ATPGRL+D LE+ L +CTY
Sbjct: 343 VEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTY 402
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPD-------------------RQTLMWSATWPKE 578
+V+DEADRMLDMGFE + KI+ + RQT+M+SAT P
Sbjct: 403 VVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPR 462
Query: 579 VRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
V LA+ YL + V + IG++ + + ++ + + +K ++ +L+
Sbjct: 463 VANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEILE 511
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 159 bits (387), Expect = 1e-37
Identities = 91/209 (43%), Positives = 125/209 (59%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++G A TG+GKT A++LP I + +P R ALVLAPTRELA QI + F
Sbjct: 41 GKDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERF 94
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G++ VR + GG +QA L + EIVIATPGRL+D LE+G L LVLDEA
Sbjct: 95 GHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDEA 154
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF+PQ+ +I+ ++ RQTL++SAT EV A +L D V++ + +A
Sbjct: 155 DRMLDMGFKPQLDRILRRLPKQRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAA 214
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQN 740
Q+ + +HEK L LL+ G +
Sbjct: 215 RAEQQVF-LADQHEKLPLLLTLLERDGDS 242
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 159 bits (387), Expect = 1e-37
Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 9/213 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI +
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286
Query: 285 SEF----GNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
E G + +R GG P EQA+D+ G+ IV+ATPGRL D L K NL+
Sbjct: 287 IEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEV 346
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
C YLVLDEADRMLDMGFE +I+ I + RQTL++SAT P++++ A+ L + +N
Sbjct: 347 CRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVN 406
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
+G +A+ N+LQ ++ + ENKL +L+
Sbjct: 407 VGRAG-AASLNVLQELEFVR---SENKLVRVLE 435
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 159 bits (386), Expect = 2e-37
Identities = 87/215 (40%), Positives = 133/215 (61%), Gaps = 10/215 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+A TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V
Sbjct: 84 GRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVI 143
Query: 285 SEF-------GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ 443
+ F G S N C+ GG+ +EQ+ ++RGV +V+ATPGRL+D L+K L
Sbjct: 144 THFSRALEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLD 202
Query: 444 RCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
C YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L V +
Sbjct: 203 VCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTV 262
Query: 624 NIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
N+G +A+ +++Q V+ ++ K L LQ+
Sbjct: 263 NVGRAG-AASLDVIQEVEYVKQEAKVVYLLECLQK 296
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 159 bits (386), Expect = 2e-37
Identities = 83/210 (39%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++L+ AQTGSGKT A++LP + + P P ++++PTRELA QI A
Sbjct: 279 ISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEA 338
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F SY++ V+GG R Q + RG +VIATPGRL+DF+++ + ++VL
Sbjct: 339 RKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVL 398
Query: 465 DEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
DEADRMLDMGF +R+I+ + RP+ QTLM+SAT+P+E++++A ++L +YV + IG +
Sbjct: 399 DEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIV 458
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQE 728
A ++ Q + ++ K +KL +L E
Sbjct: 459 G-GACSDVKQTIYEVNKYAKRSKLIEILSE 487
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 159 bits (385), Expect = 2e-37
Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 22/294 (7%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQ 278
G++++G+A+TGSGKT+A+ LP + + ++P + R P A++++PTRELA Q
Sbjct: 216 GRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHA 275
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCT 452
S + + C+FGG+ K EQ L + GV+I+ ATPGRL DFL +G+ +L +
Sbjct: 276 ALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVS 335
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
+ VLDEADRMLD GF I+ I+ P RQTLM++ATWP +++KLAE Y+ + Q+
Sbjct: 336 FAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKLAESYMINPAQVT 395
Query: 627 I-------------GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLY 767
I G+++L AN I Q V+V KE +L LL+E + R L
Sbjct: 396 IGHRTRAGGDGEGNGNIELQANSRIEQKVEVVDPRGKEFRLYELLKEAQKGSQKDDRILV 455
Query: 768 LLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
K++ + ++ + + K +++LVATDV
Sbjct: 456 FCLYKKEAVRVEQFLSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDV 509
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 158 bits (384), Expect = 3e-37
Identities = 75/160 (46%), Positives = 108/160 (67%), Gaps = 1/160 (0%)
Frame = +3
Query: 234 LVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 413
L+L PTREL Q+ F ++R+ V+GG PK Q +L++G +IV+ATPGRL+D
Sbjct: 405 LILLPTRELCMQVVDEIKAFEKELHIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLD 464
Query: 414 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
LE G +L RC Y+V+DEADR+LDMGFE Q++KI+ Q+ ++Q L ++ATWP++VRKLA
Sbjct: 465 LLESGVIHLLRCIYVVIDEADRLLDMGFEKQLKKIMTQVNRNKQLLFFTATWPEQVRKLA 524
Query: 594 EDY-LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKL 710
+ D V+I IG +L+AN NI Q V + + + KL
Sbjct: 525 YQFSSFDPVKIQIGKSELTANKNIQQSVVISSSIDLKKKL 564
Score = 48.8 bits (111), Expect = 4e-04
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVASE 290
GK+L+GVA+TGSGKTLA+ LPA++HI Q R G L A L Q + + E
Sbjct: 314 GKDLIGVAETGSGKTLAFALPALMHILKQREGERKSGRESGLENAREHRLEQNQEDMGEE 373
Query: 291 FGNSSYVRNTCVFGGAPKREQARD---LERGVEIVIATPGR 404
S N GA +R D ER V +I P R
Sbjct: 374 ---PSQEWNNEPTQGATQRSSGNDTHEAERTVYGLILLPTR 411
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 158 bits (383), Expect = 4e-37
Identities = 82/204 (40%), Positives = 119/204 (58%), Gaps = 9/204 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
G++L+G+A TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q ++
Sbjct: 214 GRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEII 273
Query: 285 SEFGNSSY------VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
+ +R+ GG P E + RGV IV+ATPGRL+D L+K L
Sbjct: 274 QHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDM 333
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
C YL +DEADRM+DMGFE +R I + RQTL++SAT PK+++ A L V IN
Sbjct: 334 CRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTIN 393
Query: 627 IGSLQLSANHNILQIVDVCQEHEK 698
+G +A+ N+ Q V+ ++ K
Sbjct: 394 VGRAG-AASMNVTQQVEYVKQEAK 416
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 157 bits (382), Expect = 5e-37
Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 7/177 (3%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVA 284
G++L+ AQTGSGKT A+ P I I R G P AL+L+PTREL+ QI + A
Sbjct: 157 GRDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEA 216
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F + ++ +GGAP +Q R+LERGV+I++ATPGRL+D +E+ +L+ YL L
Sbjct: 217 KKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLAL 276
Query: 465 DEADRMLDMGFEPQIRKIIDQI-RPD---RQTLMWSATWPKEVRKLAEDYLXDYVQI 623
DEADRMLDMGFEPQIRKI++Q+ P RQT+++SAT+P E++ L D+L Y +
Sbjct: 277 DEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQIL--DHLEFYAAV 331
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 157 bits (381), Expect = 7e-37
Identities = 103/298 (34%), Positives = 152/298 (51%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +G +L+G AQTG+GKT A+ LP + ++ P LVL+PTRELA QI Q
Sbjct: 30 LLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSF 89
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ +G + R T +FGG + Q R L+RGV + IATPGRL+D +++G +L + VL
Sbjct: 90 NVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVL 149
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF P ++ I+ ++ RQT+ ++AT P +V +LA L + V+I +
Sbjct: 150 DEADRMLDMGFMPALKTIVSKLPKQRQTIFFTATMPPKVAQLASGLLNNPVRIEVAPEST 209
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMD 824
+A +++ V Q ++ LL+ Q + G R L K K + +
Sbjct: 210 TAERVEQRLMYVSQGDKR-----ALLEHSLQAEGVG-RTLVFTKTKHGADRLAKELNASG 263
Query: 825 GQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
+ A T K + +LVATDV R G +NFD P P
Sbjct: 264 IRTDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAA-RGIDVDGVTHVVNFDLPIDP 320
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 157 bits (381), Expect = 7e-37
Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 3/202 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+ SE
Sbjct: 77 GRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEM 136
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ V GG P Q L G ++V+ATPGRL+D ++G L + TYLV+DEA
Sbjct: 137 LDVIRCPGNPVCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEA 196
Query: 474 DRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DRML MG E Q+RKI+ RQTL+WSAT P+ + +LA + + + I +G L
Sbjct: 197 DRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGGL 256
Query: 645 SANHNILQIVDVCQEHEKENKL 710
A ++ Q V ++K KL
Sbjct: 257 IA-PSVQQNVVFLYHYQKPQKL 277
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 157 bits (381), Expect = 7e-37
Identities = 83/204 (40%), Positives = 126/204 (61%), Gaps = 9/204 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+A TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q +V
Sbjct: 183 GRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVV 242
Query: 285 SEFG----NSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
+F + Y +R+ GG R Q ++RGV IV+ATPGRL D L K +L
Sbjct: 243 EQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDA 302
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
C YL LDEADR++D+GFE IR++ D + RQTL++SAT P +++ A L V +N
Sbjct: 303 CRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVN 362
Query: 627 IGSLQLSANHNILQIVDVCQEHEK 698
+G +AN +++Q V+ ++ K
Sbjct: 363 VGRAG-AANLDVIQEVEYVKQEAK 385
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea squirt)
Length = 770
Score = 157 bits (380), Expect = 9e-37
Identities = 87/218 (39%), Positives = 129/218 (59%), Gaps = 9/218 (4%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVA 284
++L+ AQTGSGKT A++LP + I N P A+V+ PTREL QI A
Sbjct: 351 RDLMACAQTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEA 410
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F + VR +GG Q RDL+RG I+IATPGRL+DF+ +G L +++L
Sbjct: 411 RKFSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVIL 470
Query: 465 DEADRMLDMGFEPQIRKIIDQ----IRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQINI 629
DEADRMLDMGFE +IRK+ + DR TLM+SAT+P E+++LA D+L D++ + +
Sbjct: 471 DEADRMLDMGFETEIRKLASSPGMPSKSDRHTLMFSATFPDEIQRLAHDFLREDFLFLTV 530
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
G + + I+ V Q+ +K KL L+ ++ + +
Sbjct: 531 GRVGGACTDVTQSIIQVDQD-DKRAKLLELISDVAETR 567
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 157 bits (380), Expect = 9e-37
Identities = 91/218 (41%), Positives = 136/218 (62%), Gaps = 8/218 (3%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQ 269
++ G++++ AQTGSGKT A++LP + +I NN P P LV+ PTRELA Q
Sbjct: 294 NVMNGRDIMACAQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQ 353
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
I + A +F +SS + +GGA Q + + G I++ATPGRL+DFLEKG
Sbjct: 354 IMREARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSL 413
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQ--IRP--DRQTLMWSATWPKEVRKLAEDYLXDYV 617
YLVLDEADRMLDMGF I+ +I+ + P +R TLM+SAT+P E+++LA +L +Y+
Sbjct: 414 KYLVLDEADRMLDMGFLSSIKTVINHKTMTPTAERITLMFSATFPHEIQELASAFLNNYL 473
Query: 618 QINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
+ +G++ +AN ++ Q V + EK+ KL + +EI
Sbjct: 474 FVVVGTVG-AANTDVKQEVLCVPKFEKKAKLVEMCEEI 510
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 156 bits (379), Expect = 1e-36
Identities = 84/219 (38%), Positives = 134/219 (61%), Gaps = 9/219 (4%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAI---VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQV 281
++L+ AQTGSGKT A+++P + + ++ + P+ALV+APTRELA QIQ+
Sbjct: 391 RDLMSCAQTGSGKTAAFLIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKE 450
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
A +F ++ ++ ++GG R +++ +++ TPGRL DFL K +L YL+
Sbjct: 451 ARKFAQNTSIKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLI 510
Query: 462 LDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
LDEADRMLDMGF P+I+ II+ + DR TLM+SAT+P E++ LA ++L +YV + I
Sbjct: 511 LDEADRMLDMGFLPEIKAIINDFDMPPKEDRHTLMFSATFPTEIQNLAAEFLNNYVYLTI 570
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
G + + +I Q + +E K +KL +L G N++
Sbjct: 571 GKVG-GTHSDITQCIMEVEESAKRDKLIEILDTEGTNRN 608
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 156 bits (379), Expect = 1e-36
Identities = 88/221 (39%), Positives = 131/221 (59%), Gaps = 9/221 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+A TGSGKTL ++LP I+ + PI G+GP +++ P+RELA+Q V
Sbjct: 219 GRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVI 278
Query: 285 SEF----GNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
+F + Y +R GG R Q +++GV IV+ATPGRL D L K NL
Sbjct: 279 EQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDN 338
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
C YL LDEADR++D+GFE IR++ D + RQTL++SAT PK+++ A+ L V +N
Sbjct: 339 CRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVN 398
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
+G +AN +++Q V E+ KE+ + L E Q P
Sbjct: 399 VGRAG-AANLDVIQEV----EYVKEDARIIYLLECLQKTPP 434
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 156 bits (378), Expect = 2e-36
Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 9/208 (4%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 272
++ G++++G+A TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q
Sbjct: 212 AVLSGRDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQT 271
Query: 273 QQVASEFGNS------SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
+ + NS +R GG P E + RGV I++ATPGRL+D L+K
Sbjct: 272 YDIIQHYTNSLRHHHCPEIRCCLAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMV 331
Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY 614
L C YL +DEADRM+DMGFE +R I RQTL++SAT PK+++ A L
Sbjct: 332 KLGVCRYLCMDEADRMIDMGFEEDVRTIFSFFEGQRQTLLFSATMPKKIQNFARSALVKP 391
Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEK 698
V IN+G +A+ N++Q V+ ++ K
Sbjct: 392 VTINVGRAG-AASMNVIQEVEYVKQEAK 418
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 155 bits (375), Expect = 4e-36
Identities = 90/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
+ +G +LVG+AQTG+GKT A++LP + I N P R ALVLAPTRELA QI
Sbjct: 91 MLEGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIAD 148
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
A +G + V GGA QAR +E GV++++ATPGRL+D + G L +
Sbjct: 149 AARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETV 208
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
VLDEAD+MLD+GF P IR+I+ ++ RQ +M+SAT PK +R LA ++L D ++ + S+
Sbjct: 209 VLDEADQMLDLGFIPAIRQIMAKLPRQRQAVMFSATMPKPIRALAGEFLRDPREVAV-SV 267
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
+ I Q V + EK++KL LL ++
Sbjct: 268 ESKPVDRIDQQVLLLAPEEKKDKLAWLLADV 298
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 154 bits (373), Expect = 7e-36
Identities = 84/208 (40%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELAQQIQQVA 284
G++++G AQTG+GKT ++ LP I + Q P+ AL+L PTRELA Q+
Sbjct: 48 GRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANV 107
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ + +R+ VFGG Q +L RGVEI+IATPGRL+D +++ T NL + LVL
Sbjct: 108 HAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVL 167
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF P +++I++ + +RQTL++SAT+ E++KLA YL + I +
Sbjct: 168 DEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNA 227
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQE 728
+A+ + QIV E +K+ + L+++
Sbjct: 228 AAS-TVTQIVYDVAEGDKQAAVVKLIRD 254
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 154 bits (373), Expect = 7e-36
Identities = 81/207 (39%), Positives = 125/207 (60%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +GK+L G+AQTG+GKT A+ LP+I ++ P R G L+L+PTRELA QI +
Sbjct: 40 LLEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARAC 99
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+++ + VFGG P Q R L+RG +I++ATPGRL+D +++ L+ VL
Sbjct: 100 NDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVL 159
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD+MLD+GF +R+I + +RQTL +SAT PK +++L+ +L D V +++ Q
Sbjct: 160 DEADQMLDLGFIHALRRIDKLLPKNRQTLFFSATMPKTIQELSSQFLSDPVTVSVAP-QS 218
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQ 725
S + Q + EK+ L + L+
Sbjct: 219 STAERVEQFGIFVNQSEKQALLTITLK 245
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|Rep:
DEAD-box helicase 11 - Plasmodium falciparum
Length = 941
Score = 153 bits (370), Expect = 2e-35
Identities = 123/331 (37%), Positives = 170/331 (51%), Gaps = 41/331 (12%)
Frame = +3
Query: 120 NLVGVAQTGSGKTLAYILPAIVH-INNQPP---------------IRRGDGPIALVLAPT 251
+L+GVAQTGSGKT Y+LP I H + N PP R PI L+LAPT
Sbjct: 401 DLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPT 460
Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT 431
RELA QI A +F + ++ ++GG + Q +L++G +I++ATPGRL D LEKG
Sbjct: 461 RELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGK 520
Query: 432 TNLQRCTYLVLDEADRMLDMGFEPQIRKII-DQIRP-----------------------D 539
L T+LVLDEADRMLDMGF PQIR I+ D P
Sbjct: 521 IKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSENKVEYKKYCNDIIK 580
Query: 540 RQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNV 716
RQT+M+SAT+ KE++ LA++YL Y + +G + S N I Q +V V E+ENK N
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFV----EEENKCNY 635
Query: 717 LLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKR 896
LL + +N + G L++ ++ +S+ +C + + + KR
Sbjct: 636 LLNLLAENNN-GLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERE-RALKLFKR 693
Query: 897 VVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
+ +ILVATDV R INFD P
Sbjct: 694 GIKNILVATDVAA-RGLDISNIKHVINFDLP 723
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 152 bits (369), Expect = 2e-35
Identities = 89/225 (39%), Positives = 141/225 (62%), Gaps = 13/225 (5%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVH--------INNQPPIRRGDGPIALVLAPTREL 260
L G++L+ AQTGSGKT A+++P I+H +++ + + P AL+++PTREL
Sbjct: 336 LLSGRDLMACAQTGSGKTAAFLIP-IIHTLLAKDRDLSDMSSANQVE-PRALIISPTREL 393
Query: 261 AQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 440
QI A +F S ++ ++GG Q + + +GV+I++ATPGRL+D + KG
Sbjct: 394 TIQIFDEARKFSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITF 453
Query: 441 QRCTYLVLDEADRMLDMGFEPQIRKII--DQIRP--DRQTLMWSATWPKEVRKLAEDYLX 608
++VLDEADRMLDMGF P + K++ D ++P +RQTLM+SAT+P+E+++LA +L
Sbjct: 454 DAIEFVVLDEADRMLDMGFLPDVEKVLRHDTMKPPGERQTLMFSATFPQEIQQLAAKFLN 513
Query: 609 DYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL-QEIGQN 740
+YV + +G + SA +I Q ++ +K KL LL +EI QN
Sbjct: 514 NYVFVTVGIVG-SACTDIEQSFFEVKKSDKRTKLKELLNEEIEQN 557
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 152 bits (369), Expect = 2e-35
Identities = 80/194 (41%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGPI-ALVLAPTRELAQQI 272
S+ GK+++ AQTG+GKT + LP + + + P+ AL++APTRELA QI
Sbjct: 38 SILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQI 97
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
+ ++G +R VFGG Q L+ GVEI++ATPGRL+D +E+ N +
Sbjct: 98 DESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTE 157
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
LVLDEADRMLDMGF P I++++ + P RQ+LM+SAT+ E+RKLA+ L V+I
Sbjct: 158 ILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLMFSATFSGEIRKLADSLLKQPVRIE-A 216
Query: 633 SLQLSANHNILQIV 674
++Q + N +I ++
Sbjct: 217 AVQNTVNESISHVI 230
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 152 bits (369), Expect = 2e-35
Identities = 77/214 (35%), Positives = 132/214 (61%), Gaps = 8/214 (3%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQVA 284
++L+ AQTGSGKT AY++P I + + P A+V+ PTRELA QI + A
Sbjct: 342 RDLMACAQTGSGKTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELAIQIFKEA 401
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F + ++ V+GG R Q+ ++ G I++ TPGRLIDF+ +G N C +LVL
Sbjct: 402 VKFSYDTIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVL 461
Query: 465 DEADRMLDMGFEPQIRKIIDQ----IRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
DEADRMLDMGF +++K++ ++ +R TLM+SAT+P EV++LA ++L +Y+ + +G
Sbjct: 462 DEADRMLDMGFMGEVKKVVYHGTMPVKVERNTLMFSATFPNEVQELAAEFLENYIFVTVG 521
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
++ + + +++++ + + L +L ++ G
Sbjct: 522 TVGGACMDVLQEVIEIDAKSRIDRLLEILTEKEG 555
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 152 bits (369), Expect = 2e-35
Identities = 83/229 (36%), Positives = 136/229 (59%), Gaps = 17/229 (7%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR--------GDGPIALVLAPTRE 257
++ G++++ VA+TGSGKTLA++LP + HI ++ + P+ +++ PTRE
Sbjct: 411 AVMSGRDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRE 470
Query: 258 LAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG--- 428
L QI + F + + C +GG+P ++Q L++G I++ TPGR+ID L
Sbjct: 471 LCVQIYRDLRPFLAALELTAVCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGR 530
Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLX 608
+L R T+LV+DEADRM DMGFEPQ+ K+ IRPDRQT+++SAT+PK++ +LA L
Sbjct: 531 VLSLSRVTFLVIDEADRMFDMGFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLARRVLS 590
Query: 609 DYVQINIGSLQLSAN------HNILQIVDVCQEHEKENKLNVLLQEIGQ 737
++G +++ I Q V+V Q +++K LL+ +G+
Sbjct: 591 KRSSDSLGPIEIIVGARSVVASEITQFVEVFQ--NEKSKFPRLLEVLGK 637
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 152 bits (368), Expect = 3e-35
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 1/210 (0%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S+ ++L+ VAQTG+GKT +++LP I + + R P +L+L PTRELA Q+ +
Sbjct: 34 SVLMMRDLIAVAQTGTGKTASFVLPMIDILAHGRC--RARMPRSLILEPTRELAAQVAEN 91
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
++G + + + GG P EQ LE+GV+++IATPGRL+D E+G L C LV
Sbjct: 92 FEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLV 151
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
+DEADRMLDMGF P I I ++ RQTL++SAT P ++KLA+ +L + QI I S
Sbjct: 152 IDEADRMLDMGFIPDIETICTKLPTSRQTLLFSATMPPAIKKLADRFLSNPKQIEI-SRP 210
Query: 642 LSANHNILQ-IVDVCQEHEKENKLNVLLQE 728
+AN I Q +++V +K+ ++L E
Sbjct: 211 ATANTLIDQRLIEVSPRSKKKKLCDMLRAE 240
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 152 bits (368), Expect = 3e-35
Identities = 114/318 (35%), Positives = 156/318 (49%), Gaps = 27/318 (8%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAS 287
++L+G+A+TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI + +
Sbjct: 736 RDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETN 795
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+F + R V GG QA +L RGVEIVI TPGRL D LEK T L +C Y++LD
Sbjct: 796 KFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILD 855
Query: 468 EADRMLDMGFEPQIRKIIDQI------------------------RPDRQTLMWSATWPK 575
EADRM+DMGFE + I+D+I R R T M+SAT P
Sbjct: 856 EADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPP 915
Query: 576 EVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGA 755
V +L+ YL I+IG + +I Q ++ E +K+ K LQEI + +P
Sbjct: 916 SVERLSRKYLRAPAYISIGD-PGAGKRSIEQKLEFLTEGKKKQK----LQEILEMYEPPI 970
Query: 756 RPLYLLKLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGC 935
+ + K+ + M + A K ILVATDV
Sbjct: 971 --IVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDV-A 1027
Query: 936 XRS*CGMGSNFXINFDXP 989
R G INFD P
Sbjct: 1028 GRGIDVHGVKLVINFDMP 1045
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 151 bits (366), Expect = 5e-35
Identities = 75/132 (56%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+C G++ +G+A TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A
Sbjct: 137 ICGGRDALGLATTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEA 196
Query: 285 SEFGNSSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLE-KGTTNLQRCTYL 458
+ F + C +FGGA K EQ + L G EIV+ATPGRLID L K + +L+R TYL
Sbjct: 197 NAFNRAGVPARCCAIFGGASKHEQLKRLRAGAEIVVATPGRLIDVLHVKNSIDLRRVTYL 256
Query: 459 VLDEADRMLDMG 494
LDEADRMLDMG
Sbjct: 257 ALDEADRMLDMG 268
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 151 bits (366), Expect = 5e-35
Identities = 85/229 (37%), Positives = 130/229 (56%), Gaps = 24/229 (10%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVA 284
G++++G+A+TGSGKT A+++P +++I+ QP + + DGP ALV+APTREL QQI++
Sbjct: 450 GRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKET 509
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F R + GG +QA + +G EI+IATPGRL D LEK L +C Y+VL
Sbjct: 510 RNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVL 569
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPD---------------------RQTLMWSATWPKEV 581
DEAD M+D+GFEPQ+ ++D + R T+++SAT P V
Sbjct: 570 DEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLV 629
Query: 582 RKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
KL++ YL I IG + ++ V E++K+ L L+++
Sbjct: 630 EKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIKD 678
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 151 bits (365), Expect = 6e-35
Identities = 84/213 (39%), Positives = 120/213 (56%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +G++L+G+AQTG+GKT ++ LP + + P +G LVLAPTREL QI
Sbjct: 41 LLEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGF 100
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F VR T +FGG + Q + LE GV+I++A PGRL+D +E+G +L + LVL
Sbjct: 101 ESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVL 160
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD+MLDMGF I +I+ + DR T+++SAT PK + L E L + ++ I
Sbjct: 161 DEADQMLDMGFAKPIERIVATLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEIAP-PS 219
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
S I Q V +K+ L L+ G Q
Sbjct: 220 STVDRIAQSVMFLNASDKKAALLAQLRTPGIGQ 252
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 150 bits (364), Expect = 8e-35
Identities = 87/207 (42%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAS 287
+G +L+ AQTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+
Sbjct: 40 RGDDLLAEAQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTL 97
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
E+G +R V+GG P Q + L+RG +I++ATPGRL+D L + +L++ YLVLD
Sbjct: 98 EYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLD 157
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
EADRMLD+GF I+KI+D DRQTL+++AT + V LAE YL + +I + +
Sbjct: 158 EADRMLDLGFIDPIQKIMDYAADDRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNST 217
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQE 728
A I Q +K + L+ L+ E
Sbjct: 218 AK-QIRQFAYQVDYGQKADILSYLITE 243
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 150 bits (364), Expect = 8e-35
Identities = 79/187 (42%), Positives = 116/187 (62%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+AQTG+GKT A+ LP I + N R P ALV+APTRELA Q+ ++
Sbjct: 39 GQDVLGIAQTGTGKTAAFTLPLIDKLMNGRAKARM--PRALVIAPTRELADQVASSFEKY 96
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ + + GG +Q + L+RGV+++IATPGRL+D E+G + +LV+DEA
Sbjct: 97 AKGTKLSWALLIGGVSFGDQEKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEA 156
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF P I +I P +QTL +SAT P E+ +L + +L D V+I S + N
Sbjct: 157 DRMLDMGFIPDIERIFKMTPPKKQTLFFSATMPPEITRLTKQFLKDPVRIE-ASRPATTN 215
Query: 654 HNILQIV 674
NI Q++
Sbjct: 216 ENITQLM 222
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 150 bits (364), Expect = 8e-35
Identities = 102/296 (34%), Positives = 145/296 (48%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++++G AQTG+GKT A LP + + P+ALVLAPTRELA QI
Sbjct: 38 EGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDA 97
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+G +R+ ++GG + Q + L+RG I++ATPGRL+D + +G L + VLDE
Sbjct: 98 YGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDE 157
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF P +++II Q+ RQ+L +SAT ++ +LA L V +N+ S
Sbjct: 158 ADRMLDMGFLPDLKRIITQLPTQRQSLFFSATLAPKITELAHSLLSKPVTVNVTPKTTSV 217
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQ 830
Q++ V + N LLQ+I D R L K K T + +
Sbjct: 218 EKIQQQLMFV-----ERNFKQPLLQKI-LGGDEVERALVFTKTKRTANTLSQRLVRSGFK 271
Query: 831 LCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
A + +R +LVATDV R G INFD P P
Sbjct: 272 ATAIHGNKSQGARQQALEAFRRKQVQVLVATDVAA-RGIDIDGITHVINFDLPVEP 326
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 150 bits (364), Expect = 8e-35
Identities = 89/223 (39%), Positives = 129/223 (57%), Gaps = 9/223 (4%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQV 281
L G +++G+A TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V
Sbjct: 127 LANGHDVIGLAPTGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKV 181
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
G VR +GGAP+ QAR L G + ++A PGRL DFL+ G +++ ++LV
Sbjct: 182 FQNLG-CGQVRVCEAYGGAPRDLQARHLRNGCDALVACPGRLKDFLDGGDVSIRNLSFLV 240
Query: 462 LDEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXD---YVQIN 626
DEADR+LDMGF+ + +I+ + QT+MWSATWP+ V+ +A YL D ++
Sbjct: 241 FDEADRLLDMGFQVHLDEIMAYLDSASHPQTMMWSATWPESVQAMARKYLSDDRVLIRAG 300
Query: 627 IGSLQLSANHNILQIVDVCQEH-EKENKLNVLLQE--IGQNQD 746
L N I Q + C+ E+ KL L+++ I N+D
Sbjct: 301 TAGAGLQVNERIKQELIFCRTFTERIEKLGSLVEDGTIDDNKD 343
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28; n=16; Pezizomycotina|Rep: Pre-mRNA-splicing
ATP-dependent RNA helicase PRP28 - Coccidioides immitis
Length = 817
Score = 150 bits (364), Expect = 8e-35
Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 30/229 (13%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQ 275
Q ++L+GVA TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELAQQI+
Sbjct: 413 QNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIE 472
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
A +F N + GG EQ+ L G EI+IATPGRL+D +E+ L +C Y
Sbjct: 473 NEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVLSQCCY 532
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQI-----RPD--------------------RQTLMWS 560
+++DEADRM+D+GFE + KI+D + +PD RQT+M++
Sbjct: 533 VIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLGGKDRYRQTMMYT 592
Query: 561 ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENK 707
AT P V ++A YL + IG++ A + Q V+ +K K
Sbjct: 593 ATMPSAVERIARKYLRRPAIVTIGNIG-EAVDTVEQRVEFISGEDKRKK 640
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 150 bits (363), Expect = 1e-34
Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G++L+ A+TGSGKTL Y LP I H +QP +G+GPI LVL PT+ELA Q+ +
Sbjct: 80 ALMSGRDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTL 139
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCT 452
E G ++ +R +G + R + G E+++ATPGRL+D L T +L R +
Sbjct: 140 LDELGEAARLRCVASYGSTSLSDNIRHAKVGCELMVATPGRLLDLLTVNGGKTLSLSRVS 199
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
++++DEADR+ D GF + + IRPDR T M SAT PKE+R + +L + V I++G
Sbjct: 200 FVIVDEADRLFDSGFMEHVEAFLKNIRPDRVTGMISATMPKELRGVVAQHLRNPVVISVG 259
Query: 633 SLQLSANH 656
A++
Sbjct: 260 GKPTPASN 267
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 1123
Score = 150 bits (363), Expect = 1e-34
Identities = 76/187 (40%), Positives = 120/187 (64%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++L+G+A+TGSGKT +YI+PAI H+ Q +GP L++APT+ELAQQI+ A++
Sbjct: 779 GRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKELAQQIEIKANQL 835
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+S ++ ++ +REQ +++ +IVIAT GRL+DF+ L +V+DEA
Sbjct: 836 LENSPIKAVAIYASPNRREQINAVKKA-DIVIATFGRLLDFMSSNFVKLNGIGMVVIDEA 894
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
D +L + Q+ I+ + D Q LMWSA+W EVR LAE YL +Y++I + + +L+ N
Sbjct: 895 DNILKNDNQQQLGAILKHVPIDSQYLMWSASWIDEVRDLAEQYLKNYIKIVVDAFELTVN 954
Query: 654 HNILQIV 674
+I QI+
Sbjct: 955 KDIKQII 961
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 150 bits (363), Expect = 1e-34
Identities = 89/230 (38%), Positives = 134/230 (58%), Gaps = 24/230 (10%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQV 281
Q ++L+G+A+TGSGKT ++++P + +I+ P + + GP AL+L PTRELAQQI+
Sbjct: 303 QNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETE 362
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
++F +R + GG +QA L G EIVIATPGRL D +E+ L +CTY+V
Sbjct: 363 TNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKDCIERHVLVLSQCTYVV 422
Query: 462 LDEADRMLDMGFEPQIRKIID-----QIRPD---------------RQTLMWSATWPKEV 581
+DEAD+M+DMGFEPQ+ I+D ++PD R T+++SAT P V
Sbjct: 423 MDEADKMVDMGFEPQVNFILDSLPVSNLKPDNAIPEGSADDMVGKYRVTMLYSATMPPSV 482
Query: 582 RKLAEDYLXDYVQINIGSLQLSANHNILQIVD-VCQEHEKENKLNVLLQE 728
++A YL I IG A + QIV+ + E ++ +L +LQ+
Sbjct: 483 ERMARVYLRRPATITIGDAG-QAVATVEQIVEFIPTEDQRRTRLISILQQ 531
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28; n=1; Magnaporthe grisea|Rep: Pre-mRNA-splicing
ATP-dependent RNA helicase PRP28 - Magnaporthe grisea
(Rice blast fungus) (Pyricularia grisea)
Length = 674
Score = 150 bits (363), Expect = 1e-34
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 29/237 (12%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQV 281
Q ++L+G+++TGSGKT A++LP + +I PP+ + +GP AL+LAPTRELA QIQ
Sbjct: 293 QCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAE 352
Query: 282 ASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F C+ G E A L G EI++ATPGRL+D LE+ L +C+Y+
Sbjct: 353 VIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCSYV 412
Query: 459 VLDEADRMLDMGFEPQIRKIIDQI-----RPD--------------------RQTLMWSA 563
VLDEADRM+D GFE I KI+ + +PD RQT+M+SA
Sbjct: 413 VLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMYSA 472
Query: 564 TWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
T P V ++A++YL + IG++ + + Q + V E E+ NKL +L G
Sbjct: 473 TMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAMLNTYG 529
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase PRP28,
putative; n=2; Eukaryota|Rep: Pre-mRNA splicing factor
RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 149 bits (362), Expect = 1e-34
Identities = 90/231 (38%), Positives = 130/231 (56%), Gaps = 27/231 (11%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAS 287
++L+G+A+TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA QI +
Sbjct: 619 RDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETN 678
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+F + R V GG QA +L +GVEI+I TPGR+ D LEK T L +C Y++LD
Sbjct: 679 KFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVILD 738
Query: 468 EADRMLDMGFEPQIRKIIDQI------------------------RPDRQTLMWSATWPK 575
EADRM+DMGFE + I+D+I R R T M+SAT P
Sbjct: 739 EADRMMDMGFEDSVHFILDKIPTTNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATMPP 798
Query: 576 EVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
V +L+ YL I+IG + +I Q ++ E +K+ KL +L+E
Sbjct: 799 AVERLSRKYLRAPAYISIGD-PGAGKRSIEQKLEFTTEGKKKQKLQEILEE 848
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 149 bits (361), Expect = 2e-34
Identities = 78/204 (38%), Positives = 122/204 (59%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+GK+L+ AQTG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ ++
Sbjct: 43 EGKDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQ 99
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ + +R CV+GG Q LE G +I+IATPGRL+D L G N+ + LVLDE
Sbjct: 100 YAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDE 159
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF P +++I+ ++ D+Q +++SAT+ K ++ +A + V++ + +A
Sbjct: 160 ADRMLDMGFWPDLQRILRRLPNDKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTA 219
Query: 651 NHNILQIVDVCQEHEKENKLNVLL 722
+ Q+V + K L L+
Sbjct: 220 -ETVKQMVYPVDKKRKRELLAYLI 242
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 149 bits (361), Expect = 2e-34
Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 2/298 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++L+G+AQTG+GKT A++LP+I + LVLAPTREL QI A +
Sbjct: 38 EGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKD 97
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+G + ++ + GG + L RG +I+IATPGRL+D +++ NL LVLDE
Sbjct: 98 YGALAGLKVQSIVGGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDE 157
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
AD+MLD+GF +R+I + +RQTL +SAT PK +++L Y + VQ+++ +A
Sbjct: 158 ADQMLDLGFVHALRRISQLVPKERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTA 217
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQ 830
I Q + + Q+ EK++ L ++L G+++ PG L+ + K +
Sbjct: 218 -ERIDQYLFMVQQDEKQSLLELILS--GRHKVPGEFERILIFTRTKHGADRVVKKLSRAG 274
Query: 831 LCACTXTNTARKG*SXXPI--LKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
+ A + + +R + ILVATDV R G + +N++ P P
Sbjct: 275 IPANAIHGNKSQPQRQRALDEFRRGKTMILVATDVAA-RGIDIPGVSHVLNYELPNVP 331
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 149 bits (361), Expect = 2e-34
Identities = 83/213 (38%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--PIA-LVLAPTRELAQQIQQVA 284
G +L+ AQTG+GKT A++LP++ + P+ LVL PTRELA QI Q
Sbjct: 66 GHDLLAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNV 125
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ + +R+T +FGG +Q DL G EIV+AT GRL+D +++ +L + +VL
Sbjct: 126 QSYIKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVL 185
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF IRKI+ + RQTL++SAT+ +RKLA+D++ + + + Q
Sbjct: 186 DEADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAA-QN 244
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+ N N+ Q + +K N L L+ ++ NQ
Sbjct: 245 TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQ 277
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 149 bits (361), Expect = 2e-34
Identities = 77/212 (36%), Positives = 131/212 (61%), Gaps = 6/212 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQ 278
+ G++L+ AQTGSGKT A++LP I H+ + + + R P +++APTRELA QI
Sbjct: 208 ILNGRDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHD 267
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + ++ +GG + Q + + G +++ATPGRL+DF+++G + ++
Sbjct: 268 EGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFV 327
Query: 459 VLDEADRMLDMGFEPQIRKIIDQI----RPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
VLDEADRMLDMGF P I K++ + RQTLM+SAT+P E+++LA +L +Y+ +
Sbjct: 328 VLDEADRMLDMGFLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVF 387
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+G + A ++ Q + + ++ +K KL +L
Sbjct: 388 VGIVG-GACADVEQTIHLVEKFKKRKKLEEIL 418
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 149 bits (361), Expect = 2e-34
Identities = 87/229 (37%), Positives = 128/229 (55%), Gaps = 5/229 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +G +++G+A TGSGKT+A+ +PA+ P P +VLAPTREL QQ +V
Sbjct: 152 LDEGHDMIGLAPTGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTRELVQQTAKVF 207
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ +S VR +GGAP+ QAR L G ++++A PGRL DFL+ G ++LV
Sbjct: 208 HQL-SSGKVRVCEAYGGAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFDEVSFLVF 266
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDR--QTLMWSATWPKEVRKLAEDYLXD---YVQINI 629
DEADR+LDMGF+ Q+ I+ R QT+MWSATWP V +LA++YL ++
Sbjct: 267 DEADRLLDMGFKVQLDDILGYFSSHRPAQTMMWSATWPPVVEQLAQEYLSQNRYVIRSGT 326
Query: 630 GSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLK 776
L N NI Q + E+ K V L + G+ + A+ + ++
Sbjct: 327 AGTGLQVNENIKQHIFFADAPEERVKTLVSLIKEGKIDENTAKMMIFVE 375
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 149 bits (361), Expect = 2e-34
Identities = 87/229 (37%), Positives = 135/229 (58%), Gaps = 20/229 (8%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAS 287
++++G++ TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA QI++
Sbjct: 248 RDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETV 307
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+F + + G +QA L +G EIVIATPGRL+D LE+ L +C YLVLD
Sbjct: 308 KFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLD 367
Query: 468 EADRMLDMGFEPQIRKIID-----QIRPD------------RQTLMWSATWPKEVRKLAE 596
EADRM+DM FEPQ+ +++D ++P+ R T M+SAT V +LA
Sbjct: 368 EADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLAR 427
Query: 597 DYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+L + V + IG I Q V + +E +K ++L L+ ++G ++
Sbjct: 428 KFLRNPVVVTIG----ETTKFITQQVIMTKESDKFSRLKKLIDDLGDDK 472
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 149 bits (360), Expect = 2e-34
Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQ 278
+L +G++L G AQTG+GKT A++L + N P R G P ALVLAPTRELA QIQ+
Sbjct: 158 ALLEGRDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQK 217
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
A + + + VFGG +Q R LE+ V++VI TPGR+ID+ G+ L + L
Sbjct: 218 DAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIGTPGRIIDYSRGGSLKLSKVEVL 277
Query: 459 VLDEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
V+DEADRMLDMGF P +++I+ Q+ + +RQTL++SAT + +LA +L + V
Sbjct: 278 VIDEADRMLDMGFIPDVKRIVSQLPRKGERQTLLFSATLEDHILRLASGWLAEPV 332
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 149 bits (360), Expect = 2e-34
Identities = 75/173 (43%), Positives = 111/173 (64%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G+AQTG+GKT A++LP + + P RG A+++ PTRELA+QIQ V
Sbjct: 38 GRDVIGIAQTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEAL 93
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + +R+ ++GG + Q + L RGVEI + PGRL+D LE+GT L+ L+LDEA
Sbjct: 94 GKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEA 153
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
D+M DMGF P +R+I+ RQT+++SAT P +R LA + L + I IG
Sbjct: 154 DQMFDMGFLPDVRRILRLAPAQRQTMLFSATMPDAIRALAREALREPQTIQIG 206
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 148 bits (358), Expect = 4e-34
Identities = 80/214 (37%), Positives = 130/214 (60%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G +L+G AQTG+GKT A+ +P + +N + +L++ PTRELA QI +
Sbjct: 116 ILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESF 175
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+G + + +T +FGG + Q L++G++I+IATPGRL+D + +G +L+ + VL
Sbjct: 176 KAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVL 235
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF IRKI+ ++ +Q+L +SAT P E+ +LA L + V++++ +
Sbjct: 236 DEADRMLDMGFIHDIRKILAELPKKKQSLFFSATMPPEITRLAASILHNPVEVSVTPVSS 295
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
+ QI V +K NK N+L+ + +NQD
Sbjct: 296 TVEIINQQIFFV----DKGNKNNLLVHLL-KNQD 324
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 148 bits (358), Expect = 4e-34
Identities = 80/177 (45%), Positives = 110/177 (62%), Gaps = 1/177 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 281
L G++L+G A TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ +
Sbjct: 91 LVAGRDLLGQAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEA 147
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+G R V+GGAP Q R L +GV++V+ATPGR +D + +GT L +V
Sbjct: 148 IHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVV 207
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
LDEAD MLDMGF I I++Q RQT+++SAT P + ++A +L D V+I IG
Sbjct: 208 LDEADEMLDMGFAEDIDAILEQAPQKRQTVLFSATLPPRMDQIARRHLRDPVRIQIG 264
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 148 bits (358), Expect = 4e-34
Identities = 83/219 (37%), Positives = 130/219 (59%), Gaps = 9/219 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELAQQIQQV 281
G++L+ AQTGSGKT A++LP + H+ + + P +++APTREL QI
Sbjct: 325 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 384
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
A +F + VR ++GG R + +G I+ ATPGRL+D + K L++ YLV
Sbjct: 385 ARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLV 444
Query: 462 LDEADRMLDMGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN 626
LDEADRMLDMGF P+++K+I + RQTLM+SAT+P+E+++LA ++L +Y+ +
Sbjct: 445 LDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVA 504
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+G + A ++ Q V + K KL +L+ IG +
Sbjct: 505 VGQVG-GACRDVQQTVLQVGQFSKREKLVEILRNIGDER 542
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 147 bits (357), Expect = 6e-34
Identities = 78/182 (42%), Positives = 115/182 (63%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L QGK+++G AQTG+GKT A+ +P + + P +R ALVL PTRELA Q+ +
Sbjct: 39 ALLQGKDVIGQAQTGTGKTAAFGVPIVERL---VPGQRAVQ--ALVLTPTRELAIQVAEE 93
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
++ G + V+ ++GG Q R L GV++VI TPGR++D L + T +L + +V
Sbjct: 94 ITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVV 153
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD MLDMGF I KI+ +RQTL++SAT P E+R+LA Y+ D + I++ Q
Sbjct: 154 LDEADEMLDMGFIEDIEKILQNTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQ 213
Query: 642 LS 647
L+
Sbjct: 214 LT 215
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 147 bits (357), Expect = 6e-34
Identities = 83/214 (38%), Positives = 122/214 (57%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L Q +++G AQTG+GKT A+ LP + I +P +++ P AL+L PTRELA Q+ +
Sbjct: 37 LSQDHDIIGQAQTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEI 91
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F + ++GGAP +Q R L++GV++V+ATPGR I F+E G L YLVL
Sbjct: 92 KSFCKGRGITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVL 151
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD ML+MGF + K++ DR LM+SAT P ++K+AE Y+ + + I S +
Sbjct: 152 DEADEMLNMGFVEDVEKVLKASPDDRTVLMFSATMPPRLKKIAESYMHNSITIKAKSETM 211
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
+ I V E ENK L + + +D
Sbjct: 212 TME----TIDQVVYEAYPENKFAALCRIMDLEKD 241
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 147 bits (356), Expect = 7e-34
Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQV 281
L QG++++ AQTG+GKT AY LP I ++ Q P AL+LAPTRELAQQ+
Sbjct: 37 LLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDN 96
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
++ + + V+GG R Q L +GV+I+IATPGRL+D L T+L + LV
Sbjct: 97 LKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLV 156
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRMLDMGF P I++I+ ++ +RQTL++SAT+ V+ LA + + V++ + +
Sbjct: 157 LDEADRMLDMGFLPDIQRIMKRMPEERQTLLFSATFETRVKALAYRLMKEPVEVQVAAAN 216
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLL 722
+A+ + Q+V + K L L+
Sbjct: 217 STAD-TVKQMVYPVDKKRKSELLAYLI 242
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 147 bits (355), Expect = 1e-33
Identities = 80/207 (38%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L G +L+G+AQTG+GKT A+ LP I + +L+L PTRELA QI Q
Sbjct: 35 ALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQN 94
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
++ + ++ V+GG ++ Q +E G++I++ATPGRL+D +E G N + V
Sbjct: 95 IDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFV 154
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD MLDMGF ++ II ++ RQTL++SAT P E+ LAE L D +I Q
Sbjct: 155 LDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKI-----Q 209
Query: 642 LSANHNILQIVDVCQEH-EKENKLNVL 719
++A + +V+ H +K NK+ +L
Sbjct: 210 ITAETVTIDLVNQSVYHLDKSNKVPLL 236
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 147 bits (355), Expect = 1e-33
Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 10/219 (4%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQ--PPIRRG-DG---PIALVLAPTRELAQQIQQ 278
++++ AQTGSGKT +++LP I ++ N+ I DG P+A +LAPTREL Q+
Sbjct: 488 RDVMACAQTGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTRELVVQLFT 547
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
A +F +S ++ ++GG QA L G +++ATPGRL DF+++G N Q YL
Sbjct: 548 EARKFSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYL 607
Query: 459 VLDEADRMLDMGFEPQIRKIID--QIRPD--RQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
+LDEAD+M+DMGF PQI II+ + P R TLM+SAT+P +++ LA +L DY+ +
Sbjct: 608 ILDEADKMIDMGFGPQIEHIIEFSGMPPKGIRNTLMFSATFPDQIQHLAAQFLNDYLFLT 667
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+G + + ++ V ++E L LLQ G +Q
Sbjct: 668 VGRVGGTCTDVTQSVIQVSGTKKRET-LENLLQTSGTDQ 705
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 147 bits (355), Expect = 1e-33
Identities = 80/206 (38%), Positives = 126/206 (61%), Gaps = 5/206 (2%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G NL+ V+ TG+GKTL +++P + H+ Q + +GP AL+L+PT LA+Q V +
Sbjct: 153 GNNLIVVSPTGTGKTLCFLIPLLYHVLAQG---KQEGPTALILSPTELLARQTTLVCHQL 209
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
S+ ++ + G K +Q L +G +++I TPGRL++FL+ T N Q CTY+V+DEA
Sbjct: 210 IKSTDIKCVELTGNQMKHKQQSSLMKGADVIIGTPGRLMNFLK--TVNWQFCTYVVVDEA 267
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL---QL 644
DR+ + GF Q+R I+D IRPDRQTL++ AT P ++ +L+ + L ++ IG Q
Sbjct: 268 DRIFETGFLRQLRSIMDYIRPDRQTLLFGATLPPQIEELSMNSLKFSTRVQIGKTGAPQS 327
Query: 645 SANHNILQIVDVCQEHE--KENKLNV 716
+ HN + D ++ E KEN L +
Sbjct: 328 NIEHNFVIFDDPAKKREWIKENLLKL 353
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 147 bits (355), Expect = 1e-33
Identities = 78/167 (46%), Positives = 108/167 (64%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +GK+++G A TGSGKTLA+ I I +G+G ALVL PTRELA+Q+Q
Sbjct: 36 ILEGKDIIGGAATGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELAEQVQNSL 89
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
EF +R ++GG Q R LER ++V+ATPGRL+D +E+GT +L LVL
Sbjct: 90 KEFSRHKQLRVAPIYGGVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEILVL 148
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 605
DEADRMLDMGF + +IID+ DRQT+M+SAT K+++ L+ Y+
Sbjct: 149 DEADRMLDMGFIDDVEEIIDECPSDRQTMMFSATVSKDIQYLSSKYM 195
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 146 bits (354), Expect = 1e-33
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 3/198 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+AQTG+GKT A+ LP + H + +P R AL+L+PTRELA QI +
Sbjct: 41 GRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESI 97
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
++ + + + VFGG R Q + L RGV+I++ATPGRL+D +E+ +L+ +L+L
Sbjct: 98 ADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLIL 157
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF + KI+ + DRQ++M+SAT PK + L++ L + ++++ +
Sbjct: 158 DEADRMLDMGFVRDVMKIVGKCPDDRQSMMFSATMPKPIEDLSKKILTNPQKVSVTPAVV 217
Query: 645 SANHNILQIVDVCQEHEK 698
+ + V Q +K
Sbjct: 218 TVEKIAQSVFSVPQRAKK 235
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 146 bits (354), Expect = 1e-33
Identities = 78/173 (45%), Positives = 108/173 (62%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++ G AQTG+GKT A+ LP + + R LVL PTRELA Q+++ ++
Sbjct: 170 GRDVTGSAQTGTGKTAAFALPILHKLGAHERRLR-----CLVLEPTRELALQVEEAFQKY 224
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ + T V+GG +Q DL+RGV++V ATPGRL+D +E+GT L LVLDE
Sbjct: 225 SKYTDLTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEV 284
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
DRMLDMGF P +++I+ Q RQTL +SAT P E+ +LA L D V+I IG
Sbjct: 285 DRMLDMGFLPDVKRIVQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIG 337
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 146 bits (354), Expect = 1e-33
Identities = 84/227 (37%), Positives = 133/227 (58%), Gaps = 11/227 (4%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQI 272
S+ G++++GV+ TG+GKTL +++P I+ I + PI +GP LV+ P+RELA QI
Sbjct: 222 SVLLGRDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQI 281
Query: 273 QQVASEFGNSSYVRN--------TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 428
+ F + Y+ N +CV GG ++Q ++ GV +VIATPGRL FL
Sbjct: 282 SDITKYF--TGYIYNYGGPKLYCSCVIGGTDIKDQEFTIKSGVHMVIATPGRLNYFLNSR 339
Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLX 608
NL +C YL DEADR +D+GF+ +I I + QTL++SAT ++++ A+ L
Sbjct: 340 IINLTQCRYLCFDEADRTIDLGFDTEINGIFNHFNNQHQTLLFSATMSIKIQEFAKSALT 399
Query: 609 DYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
+ + +N+G L S N N+ Q++ + KE+KL +LLQ + + P
Sbjct: 400 NPILVNVG-LPGSPNKNVKQLLILV---PKESKLPMLLQCLKKTPPP 442
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 146 bits (353), Expect = 2e-33
Identities = 70/192 (36%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+GK+L+ +QTG+GKTLA+ P I IN PP ++ + LVL PTRELA Q+++ +
Sbjct: 37 EGKDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTN 96
Query: 291 FGNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ S ++ + GG Q R L G++++IATPGR+I+ + G L L+L
Sbjct: 97 YAEFSLRPIKTATLIGGENIDGQIRKLRMGLDVLIATPGRIIELINLGEVRLVELEMLIL 156
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD+MLD+GF +++++++ + RQ L++SAT P++V++LAE++L V++ I Q+
Sbjct: 157 DEADKMLDLGFADELKELLEALPKKRQNLLFSATLPQKVQQLAEEFLNAAVELRISRDQI 216
Query: 645 SANHNILQIVDV 680
+ ++ ++++V
Sbjct: 217 TGDNIEQRVIEV 228
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 145 bits (352), Expect = 2e-33
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G+++VG+AQTG+GKT ++ LP + + + LVL+PTREL+ QI + +
Sbjct: 53 GRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAY 112
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + +T GG P Q R L +GVE+++ATPGRL+D ++ L +LVLDEA
Sbjct: 113 GRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEA 172
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA- 650
DRMLDMGF IRKI+ ++ RQTL +SAT PK++ +LA+ L D ++ + + +A
Sbjct: 173 DRMLDMGFINDIRKIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAE 232
Query: 651 --NHNILQI 671
N ILQ+
Sbjct: 233 RINQRILQV 241
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 145 bits (352), Expect = 2e-33
Identities = 84/205 (40%), Positives = 122/205 (59%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
QGK+++ AQTG+GKT A+ILP I + + +R +LVL PTRELA Q++ A
Sbjct: 60 QGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKA 118
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ +R+ VFGG R Q + L+ GV+I++ATPGRL+D + + LVLDE
Sbjct: 119 YTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDE 178
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF I+K+I+ + +RQ +M+SAT+ ++KLA L D V+I S+Q A
Sbjct: 179 ADRMLDMGFIRDIKKVIEYLPKNRQNMMFSATFSTPIKKLALGLLNDPVEIK-ASVQNQA 237
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQ 725
I +V C K + L L++
Sbjct: 238 APTIEHLVHPCDMARKVDLLCHLIK 262
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 145 bits (352), Expect = 2e-33
Identities = 84/219 (38%), Positives = 129/219 (58%), Gaps = 9/219 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG----DGPIALVLAPTRELAQQIQQV 281
G +L+ AQTGSGKT A++LP + + P A+++APTREL QI
Sbjct: 315 GGDLMACAQTGSGKTAAFLLPILQQLMADGVAASSFVELQEPEAIIVAPTRELINQIFLE 374
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
A +F + VR V+GG Q R++ +G IV TPGRL+D +++G L + YLV
Sbjct: 375 ARKFAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQRGWIGLTKLRYLV 434
Query: 462 LDEADRMLDMGFEPQIRKIIDQ----IRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN 626
LDEADRMLDMGFEP +R+++ + +RQTL++SAT+P++++KLA D+L DY+ +
Sbjct: 435 LDEADRMLDMGFEPDMRRLVASPGMPPKENRQTLLFSATYPQDIQKLAADFLKTDYLFLA 494
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+G + A ++ Q ++ K +L L+ IG +
Sbjct: 495 VGIVG-GACSDVEQTFVQVTKYSKREQLLDFLKTIGNER 532
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 145 bits (351), Expect = 3e-33
Identities = 75/208 (36%), Positives = 125/208 (60%), Gaps = 1/208 (0%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQ 278
++ +G++L+ AQTG+GKT + LP + H+ + P +G P+ AL+L PTRELA QI +
Sbjct: 34 AVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGE 93
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
++ +R+ VFGG Q L GV++++ATPGRL+D + L + L
Sbjct: 94 NVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEIL 153
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
VLDEADRMLDMGF IR+++ ++ RQ L++SAT+ +++ LAE L + ++I + +
Sbjct: 154 VLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-AR 212
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLL 722
+ +A+ + Q V + K L+ ++
Sbjct: 213 RNTASDQVTQHVHFVDKKRKRELLSHMI 240
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 144 bits (350), Expect = 4e-33
Identities = 83/205 (40%), Positives = 121/205 (59%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G +++GVAQTG+GKT ++ LP + + R P +L+L PTRELA Q+ +
Sbjct: 327 KGHDVLGVAQTGTGKTASFTLPMLQKLAGSRA--RARMPRSLILEPTRELALQVAENFKL 384
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+G + + + GG EQ L RGV+++IATPGRL+D +G L + + LV+DE
Sbjct: 385 YGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDE 444
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF P I KI+ + RQTL +SAT E+R+LA+ +L V+I + S Q S
Sbjct: 445 ADRMLDMGFIPDIEKIVALLPAHRQTLFFSATMAPEIRRLADAFLRHPVEITV-SRQSSV 503
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQ 725
I + + + E EK L LL+
Sbjct: 504 ATTIEEALVIVPEDEKRRTLKKLLR 528
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 144 bits (349), Expect = 5e-33
Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +G++++ AQTG+GKT AY+LP + ++ D A+++APTRELAQQI Q
Sbjct: 35 ILEGRDVIACAQTGTGKTAAYLLPILDRLSAGE--FASDVVNAVIMAPTRELAQQIDQQV 92
Query: 285 SEFGNSSYVRNTCVFGGAPK---REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
F V ++GG +Q R + G +IVIATPGRLI L G+ +L +Y
Sbjct: 93 EGFSYFMPVSAVAIYGGTDGVAWEQQRRGMAMGADIVIATPGRLISHLNLGSADLSHVSY 152
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
VLDEADRMLDMGF I +I Q+ QT+M+SAT P ++RKLA L D +++ I
Sbjct: 153 FVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVMFSATMPPKIRKLAASILRDPIEVEIAI 212
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQE 728
+ +I+Q +C E +K L L ++
Sbjct: 213 SR--PPESIMQSAYICHEAQKLPILRKLFEQ 241
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 144 bits (349), Expect = 5e-33
Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 7/299 (2%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++L+G+AQTG+GKT ++LP + I R G ALVL+PTRELA QI Q A ++
Sbjct: 38 GRDLLGIAQTGTGKTGGFLLPVLHKIAEGR--RHGIRNRALVLSPTRELATQIHQAAKDY 95
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ + GG Q R+L+R +IV+ATPGRL+D + + L + +++DEA
Sbjct: 96 AKYLHTNAVLLVGGVDFIRQERNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEA 155
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF P I I+ Q+ RQ+L++SAT P +++LA + D V + + + ++
Sbjct: 156 DRMLDMGFLPDINTIVRQLPKGRQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSD 215
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
H + + V H + KL +L + + + + + + + K ++D+ L
Sbjct: 216 HIHQEWITV--SHGSQ-KLGLLKKVLDEGKSETGQVIIFTRTKRS-------AEDLSIAL 265
Query: 834 CACTXTNTARKG*SXXPILKRVVS-------SILVATDVGCXRS*CGMGSNFXINFDXP 989
+ A G P+ RV+S +LVATDV R G IN+D P
Sbjct: 266 NDAGYPSDALHGDKSQPVRNRVLSRFRRGDLKVLVATDVAA-RGLDIDGITHVINYDLP 323
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 144 bits (349), Expect = 5e-33
Identities = 76/208 (36%), Positives = 122/208 (58%), Gaps = 9/208 (4%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA--- 263
++ G++++GVA +G GKTL ++LPA++ + P+ RG+GP AL+L P+ ELA
Sbjct: 150 AVLMGRDIIGVAPSGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLPSHELAILT 209
Query: 264 -QQIQQVASEFGNSSYVRNTCVFG--GAPKREQARDLERGVEIVIATPGRLIDFLEKGTT 434
+ +Q +F + C+ G G Q + + GV IVI TPGR+ D + K
Sbjct: 210 YELAKQYCQKFQKKGFPAIHCLLGIGGMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKI 269
Query: 435 NLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDY 614
N+ C ++VLDEADRMLD FE +IR I++ RQT+++SAT PK++++ + L D
Sbjct: 270 NMDLCRFIVLDEADRMLDQVFELEIRNILEHFTGPRQTMLFSATLPKKIQEFTKQTLVDP 329
Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEK 698
+ IN+G N N++Q + ++ EK
Sbjct: 330 LVINVGR-SGQINLNVIQEILYVKQEEK 356
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 144 bits (348), Expect = 7e-33
Identities = 73/174 (41%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQV 281
L +G +L+G AQTG+GKT A+ +P + + + +G I ALVLAPTRELA QI +
Sbjct: 35 LLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAES 94
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ +G + +R +FGG + Q R LE+G++I++ATPGRL+D + +G +L + V
Sbjct: 95 FTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFV 154
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
LDE D+MLDMG +++II + +RQ +++SAT P E+ KLA+ L V+I
Sbjct: 155 LDETDQMLDMGMLHDVKRIITYLPRERQNMLFSATMPVEIEKLADTILKGPVKI 208
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 144 bits (348), Expect = 7e-33
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+GK+L+G A+TG+GKTLA+ LP + P RG P ALVL PTRELA Q VASE
Sbjct: 37 EGKDLIGQARTGTGKTLAFALPIAERL--APSQERGRKPRALVLTPTRELALQ---VASE 91
Query: 291 F-GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+ +++ V+GG +Q L RG + V+ATPGR +D+L +G +L R VLD
Sbjct: 92 LTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLD 151
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
EAD ML MGFE ++ ++ P RQTL++SAT P ++LAE Y+ + V IN+
Sbjct: 152 EADEMLSMGFEEEVEALLSATPPSRQTLLFSATLPSWAKRLAERYMKNPVLINV 205
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep: VASA
RNA helicase - Moina macrocopa
Length = 843
Score = 144 bits (348), Expect = 7e-33
Identities = 81/217 (37%), Positives = 127/217 (58%), Gaps = 8/217 (3%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAI-VHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQVA 284
++L+ A TGSGKT A+++P + + + Q P P ++++PTRELA QI + A
Sbjct: 447 RDLIASAVTGSGKTAAFLVPVVNILLEKQVQGAPSGEVQKPEVVIISPTRELAIQIHREA 506
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F ++S +++ V+GG Q L G I++ TPGRL DF++KG + + +L
Sbjct: 507 RKFSHNSVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFFIL 566
Query: 465 DEADRMLDMGFEPQIRKIIDQ--IRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
DEADRMLDMGF I I + P R TLM+SAT+P +V+K+A YL DYV + G
Sbjct: 567 DEADRMLDMGFGSDIEFIAQHPTMTPVGRRVTLMFSATFPDDVQKIAGKYLHDYVFVTTG 626
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
++ N ++ Q Q +K NKL +L+++G ++
Sbjct: 627 NIG-GMNPDVCQEFHEVQRQDKRNKLVEILRDLGNSR 662
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 144 bits (348), Expect = 7e-33
Identities = 86/214 (40%), Positives = 130/214 (60%), Gaps = 1/214 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L G+++VG A TG+GKT AY + + I + G G L++APTRELA QI +
Sbjct: 36 LLTGRDVVGQAHTGTGKTGAYSISMLQEI------KEGGGIQGLIVAPTRELAVQITEEV 89
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+F + VR ++GG Q L+RG EI++ATPGRLID +++G+ ++ R T+LVL
Sbjct: 90 KKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVL 149
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTL-MWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
DEAD MLDMGF I+ I+D + PD + + ++SAT P E+ +L+E+YL + Q + +
Sbjct: 150 DEADTMLDMGFIDDIQFILD-LTPDEKVMSLFSATMPIEILRLSEEYLKNPKQFLLDADD 208
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
LS I Q V ++ EK + L ++E G+ Q
Sbjct: 209 LS-GEGIDQSYLVIRDREKMDYLVDFIKENGKGQ 241
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 144 bits (348), Expect = 7e-33
Identities = 71/175 (40%), Positives = 117/175 (66%), Gaps = 2/175 (1%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 287
+G++++G A+TG+GKTLA+ +P I I RG P+ LVLAPTRELA+Q+++
Sbjct: 140 EGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEK--- 196
Query: 288 EFGNSSYVRNT-CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
EF S+ +T C++GG P +Q R L+ GV++ + TPGR+ID +++G NL ++VL
Sbjct: 197 EFRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVL 256
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
DEAD+ML +GF + I++++ RQ++M+SAT P +R L + YL + + +++
Sbjct: 257 DEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDL 311
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 144 bits (348), Expect = 7e-33
Identities = 91/248 (36%), Positives = 141/248 (56%), Gaps = 23/248 (9%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAS 287
++++GVA+TGSGKT ++++P I +I P + + +GP L+LAPTRELA QI+ A
Sbjct: 201 RDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAV 260
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+F + V GG +EQA ++ G E+++ATPGRL+D +++ L +C Y+V+D
Sbjct: 261 KFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMD 320
Query: 468 EADRMLDMGFEPQIRKIIDQI-----RPD---------------RQTLMWSATWPKEVRK 587
EADRM+DMGFE Q++K++ + +PD RQT+M++AT P + K
Sbjct: 321 EADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVAIEK 380
Query: 588 LAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLY 767
LA+ YL + IGS A + Q+V+ EK + LL I + Q RP
Sbjct: 381 LAKKYLRRPGIVTIGSAG-QAGSTVTQLVEFLNTDEKRKRR--LLDIISKRQ---YRPPI 434
Query: 768 LLKLKEKR 791
++ L KR
Sbjct: 435 VVFLNYKR 442
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 143 bits (347), Expect = 9e-33
Identities = 81/215 (37%), Positives = 121/215 (56%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L G+++VG +QTG+GKT A+ LP + ++ Q + A+VL PTRELA Q+
Sbjct: 37 LLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQ-----AIVLTPTRELAIQVHDAM 91
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
++F +S +R ++GG Q L+RGV IV+ TPGR+ID LE+G L + + VL
Sbjct: 92 AQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVL 151
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD ML MGF + KI+ Q DRQT ++SAT P +R L +L V + + +
Sbjct: 152 DEADEMLSMGFIDDVEKILSQAPQDRQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKA 211
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
+ N I Q+ + H + + LQ I + +DP
Sbjct: 212 TPN-KINQVAYLIPRHWTKAR---ALQPILEMEDP 242
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Related to ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 143 bits (347), Expect = 9e-33
Identities = 103/304 (33%), Positives = 155/304 (50%), Gaps = 4/304 (1%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQ 275
+++ GK+L+G A TG+GKT +++ + + G P AL+LAPTREL QI
Sbjct: 126 EAVLAGKDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILAPTRELVMQIV 185
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCT 452
+ A + G + V V+GGA +Q L+RG +IV+ATPGRLIDF K N C
Sbjct: 186 KDAKKLGRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQ 245
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
LV+DEADRMLDMGF P +R+I+ + + DRQTLM+SAT +V L+ + D +
Sbjct: 246 TLVIDEADRMLDMGFIPDVRRIVSWMPKKRDRQTLMFSATISSDVNNLSAQWCVDPEVVE 305
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPE 806
+ Q++ + + Q V + E K NVL I +N D +K + ++
Sbjct: 306 AEADQVTTD-TVEQKVYLV---TAEEKYNVLYNLIKENSDERIMIFANMKSETRKLADRL 361
Query: 807 ISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDX 986
+ +D L + R+ S + +LVATDV R G ++ +N+
Sbjct: 362 KRNSIDCLLLSGDVPQNKRQ--SRLESFRTGKVKVLVATDV-AGRGIHIDGISYVVNYTL 418
Query: 987 PXXP 998
P P
Sbjct: 419 PYEP 422
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 143 bits (347), Expect = 9e-33
Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 13/184 (7%)
Frame = +3
Query: 120 NLVGVAQTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQ 269
+++G A+TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL Q
Sbjct: 133 DILGSAETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQ 192
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
I VA +++R+ V GG R Q D RG +IATPGRL D ++G +L+ C
Sbjct: 193 ITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKYC 252
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIR--PDRQTLMWSATWPKEVRKLAEDYL-XDYVQ 620
LV+DEADRMLDMGFEPQIR+II+ + R T M+SAT+PK V LA + ++ +
Sbjct: 253 NKLVIDEADRMLDMGFEPQIREIINNLPSVSKRHTSMFSATFPKSVMSLASKLMKPNFGE 312
Query: 621 INIG 632
I +G
Sbjct: 313 ITVG 316
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 143 bits (346), Expect = 1e-32
Identities = 77/205 (37%), Positives = 122/205 (59%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++ AQTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETY 96
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G +R+ VFGG P Q + L GV++++ATPGRL+D +++ + LVLDEA
Sbjct: 97 GKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEA 156
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF I+KI+ + RQ LM+SAT+ E+R+LA+ + V+I++ +AN
Sbjct: 157 DRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216
Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
+ Q + +++K L L+++
Sbjct: 217 -TVKQWICPVDKNQKSALLIQLIKQ 240
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 142 bits (345), Expect = 2e-32
Identities = 104/296 (35%), Positives = 154/296 (52%), Gaps = 4/296 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +L+ + TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +
Sbjct: 38 GGDLLVSSHTGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTY 96
Query: 294 GNSSY-VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
G R C+ GGAP Q + L + V++V+ATPGRLID LE+G + R LVLDE
Sbjct: 97 GKEMRRFRTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDE 156
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF I+ I + +RQTL++SAT V LA + D +I I ++
Sbjct: 157 ADRMLDMGFVDDIKAIAARCPAERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKE 216
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDM-DG 827
+++ K L+ LL+++ Q ++ KR T EISD + +
Sbjct: 217 AKIEQRLLFADNMDHKNRLLDALLRDVEMVQ-------AIVFASTKRST-EEISDLLAES 268
Query: 828 QLCACTXTNTARKG*SXXPI--LKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
+ ++G + L+ + +LVATDV R + INFD P
Sbjct: 269 GFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAA-RGIDVASISHVINFDLP 323
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 142 bits (345), Expect = 2e-32
Identities = 81/176 (46%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI---NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
GK+L+G A+TG+GKTLA+ LP I ++ + + RG P A+V+APTRELA+Q VA
Sbjct: 37 GKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSRERGRLPRAIVIAPTRELAKQ---VA 93
Query: 285 SEFGNSSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
EF S +T V+GGA Q L RGV++V+ TPGRLID LE+G +L Y V
Sbjct: 94 EEFSKSGPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAV 153
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
LDEAD ML +GF I I+ Q RQT+++SAT E+ +LA YL + V +++
Sbjct: 154 LDEADEMLSVGFADAIETILQQTPAARQTMLFSATLNDEIHRLARKYLREPVVVDL 209
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 142 bits (345), Expect = 2e-32
Identities = 79/200 (39%), Positives = 122/200 (61%), Gaps = 6/200 (3%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPI-ALVLAPTRELAQQIQ 275
G +++G AQTG+GKT + LP + + N P R P+ AL+L PTRELA Q+
Sbjct: 57 GVDVMGAAQTGTGKTAGFSLPILNRLMPLATENTSPARH---PVRALILTPTRELADQVA 113
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
+ + +R+T V+GG Q + L RGVE+VIATPGRL+D +++ + NL +
Sbjct: 114 ANVHTYAKFTPLRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQV 173
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LVLDEADRMLDMGF P +++II+ + RQ L++SAT+ E++KLA+ ++ I + +
Sbjct: 174 LVLDEADRMLDMGFLPDLQRIINLLPKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEV-A 232
Query: 636 LQLSANHNILQIVDVCQEHE 695
+ + + NI Q++ E
Sbjct: 233 RRNATSENIKQVIFALDSEE 252
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 142 bits (344), Expect = 2e-32
Identities = 81/213 (38%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAS 287
+GK++ G+AQTG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A
Sbjct: 37 EGKDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAK 91
Query: 288 EF-GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ +S +R+ + GG + Q +DLE I++ATPGRLID ++ G+ ++ + VL
Sbjct: 92 KLLKHSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFVL 151
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF IR ++ + + +QTL++SAT EV +LA +L + V+I I ++
Sbjct: 152 DEADRMLDMGFIQDIRWLLHKCKNRKQTLLYSATLSVEVMRLAYRFLNEPVEIQINPEKI 211
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+IV + +E + N+++ + Q
Sbjct: 212 ITERIDQKIVHLGREEKIPYMTNLIINSKEEGQ 244
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 142 bits (343), Expect = 3e-32
Identities = 79/215 (36%), Positives = 129/215 (60%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
+L K+L+ AQTG+GKT A+ +P + I+ + A+++ PTRELA QI +
Sbjct: 52 ALSTDKDLIAQAQTGTGKTAAFGIPLLERID----FKANKFVKAIIVTPTRELALQIFEE 107
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ V+ T ++GG +Q +DLE+GV+IV+ TPGR+ID L + T +L YLV
Sbjct: 108 LKSLKGTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLV 167
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRMLDMGF + +II + +++T ++SAT PKE+ +A ++ +Y+ ++ +
Sbjct: 168 LDEADRMLDMGFLDDVLEIIKRTGENKRTFLFSATMPKEIVDIARKFMKEYIHVSTVKDE 227
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
L+ N Q+ E ++++KL +L + I N D
Sbjct: 228 LT-TENAEQLY---FEVDEKDKLPLLCRIIDMNPD 258
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; n=2;
Oligohymenophorea|Rep: DEAD/DEAH box helicase family
protein - Tetrahymena thermophila SB210
Length = 749
Score = 142 bits (343), Expect = 3e-32
Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 28/321 (8%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQV 281
Q K+L+G++QTG+GKT A+++P I ++ + PP+ DGP AL+L PTRELA QI++
Sbjct: 359 QRKDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQIEKE 418
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
++ +++ + GG + QA L+ G E++I T GR+ D LEK L + +++V
Sbjct: 419 FQNLTSNMRMKSLVMVGGKDEGNQAFKLKLGCELLIGTVGRIKDALEKNYLVLDQVSWVV 478
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPD-----------------------RQTLMWSATWP 572
LDEAD+M+D+ FE + I+D+IR + R T ++SAT P
Sbjct: 479 LDEADKMIDLNFEQDVNFILDKIRTNMKSEDENMAVLQEQEAKVGEKIFRVTHLFSATMP 538
Query: 573 KEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPG 752
+ +LA+ YL + I+IG A +I QIVD E +K+++L +L+
Sbjct: 539 PNLERLAKKYLRSFCYISIGEAG-DAKKDIEQIVDFMSEGQKKSRLQKILET-------- 589
Query: 753 ARPLYLLKLKEKRXT--XPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATD 926
A+P ++ EK +I D Q T ++ + K+ ILVATD
Sbjct: 590 AKPPIIIFANEKTAVEKLSKILDRWGWQNVIYHGGKTQQQREAAVDGFKKGKYDILVATD 649
Query: 927 VGCXRS*CGMGSNFXINFDXP 989
+G R G INFD P
Sbjct: 650 LGA-RGLHVDGVKMVINFDAP 669
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28; n=1; Candida glabrata|Rep: Pre-mRNA-splicing
ATP-dependent RNA helicase PRP28 - Candida glabrata
(Yeast) (Torulopsis glabrata)
Length = 582
Score = 142 bits (343), Expect = 3e-32
Identities = 95/284 (33%), Positives = 156/284 (54%), Gaps = 13/284 (4%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ-- 278
++++G+A TGSGKTLA+ +P + ++ P ++ DGP+ALVL PTRELAQQI Q
Sbjct: 214 RDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEI 273
Query: 279 --VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
+ S + N + + GG + + L G +I+IATPGRL+D L+ L +
Sbjct: 274 NRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQ 333
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPD----RQTLMWSATWPKEVRKLAEDYLXDYVQ 620
LVLDEADRM+D+GFE Q++ I+ + D RQT++++AT V +A+ YL + +
Sbjct: 334 SLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVESIAKGYLKNPLH 393
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTX 800
+++GS S I Q+V + +K KL+ L ++ +N G + + KE
Sbjct: 394 VSVGSRWDSDKPLITQVVRHTGDDDK--KLSFLKDDLIKN---GLPAIIFINYKETADWL 448
Query: 801 P-EISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDV 929
+SD + + + + R+ S LK +++L+AT+V
Sbjct: 449 TLRLSDRFNIVTLHGSKSQSQRE--SAIQKLKSGTANVLIATNV 490
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 141 bits (342), Expect = 4e-32
Identities = 71/180 (39%), Positives = 110/180 (61%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++++G A+TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ ++
Sbjct: 40 EGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAK 96
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ + V+GG P R Q L+R IV+ TPGR+ID + + L+ +VLDE
Sbjct: 97 LTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDE 156
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLD+GF P I KI+ + +RQTL+ SAT P + KLA+ Y+ + +++ +SA
Sbjct: 157 ADRMLDIGFRPDIEKILRRCPEERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISA 216
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 141 bits (342), Expect = 4e-32
Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 1/207 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +G+++VG+AQTG+GKT A+ LP + +I+ + +R P ALVL PTRELAQQ+ +
Sbjct: 43 LLEGRDVVGLAQTGTGKTAAFALPILANIDVK--VR---SPQALVLCPTRELAQQVAEAF 97
Query: 285 SEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+G +R +FGGA R+Q + L G IV+ATPGRL+D +E+ + +L +V
Sbjct: 98 RSYGRGMGGLRILSIFGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVV 157
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD ML MGF + I+ + +R+ ++SAT PK VR +A +L + +I++ +
Sbjct: 158 LDEADEMLRMGFIDDVDTILAKTPKERKVALFSATMPKRVRDIANKHLSNPAEISVAA-A 216
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLL 722
+ N NI Q + + K L LL
Sbjct: 217 ATTNENIEQCYWLAKGASKLEALKRLL 243
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 141 bits (342), Expect = 4e-32
Identities = 78/214 (36%), Positives = 127/214 (59%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S+ GKN++ AQTG+GKT +++LP + + P IR A++L PTRELA Q+++
Sbjct: 34 SILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRP-KRVRAIILTPTRELALQVEEN 92
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+++ + ++GG Q + L GV++++ATPGRL+D + + LV
Sbjct: 93 INQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLV 152
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRMLDMGF I II+++ RQ L++SAT K+V+ LA+ + D ++I I S +
Sbjct: 153 LDEADRMLDMGFIEDINSIIEKLPEQRQNLLFSATLSKQVKALAKSAIPDAIEIEI-SRK 211
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+A+ +I Q + + +K L+ L+QE +Q
Sbjct: 212 SAASTHIDQWLTTVDKDKKSALLSHLIQEQNWSQ 245
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 141 bits (342), Expect = 4e-32
Identities = 77/205 (37%), Positives = 121/205 (59%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++ AQTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETY 96
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G +R+ VFGG P Q + L GV++++ATPGRL+D ++ + LVLDEA
Sbjct: 97 GKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEA 156
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF I+KI+ + RQ LM+SAT+ E+R+LA+ + V+I++ +AN
Sbjct: 157 DRMLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAAN 216
Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
+ Q + +++K L L+++
Sbjct: 217 -TVKQWICPVDKNQKSALLIQLIKQ 240
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 141 bits (342), Expect = 4e-32
Identities = 68/159 (42%), Positives = 105/159 (66%), Gaps = 1/159 (0%)
Frame = +3
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
I V E G + + C++GG K Q L+ GV+IVI TPGR+ D +E G L
Sbjct: 246 IADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDV 305
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN 626
+++VLDEADRMLDMGFEP++R I+ Q RQT+M+SATWP V +LA++++ + +++
Sbjct: 306 SFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVV 365
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
IGS L+ANH+++QIV+V + ++++L LL + + Q
Sbjct: 366 IGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQ 404
Score = 101 bits (243), Expect = 4e-20
Identities = 51/124 (41%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQ 275
L G++ +G+A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI
Sbjct: 126 LLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIA 184
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
V E G + + C++GG K Q L+ GV+IVI TPGR+ D +E G L ++
Sbjct: 185 DVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSF 244
Query: 456 LVLD 467
++ D
Sbjct: 245 VIAD 248
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 141 bits (341), Expect = 5e-32
Identities = 95/216 (43%), Positives = 125/216 (57%), Gaps = 10/216 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G ++V VA+TGSGKTLA+ H +++ G LV+APTRELA QIQ +F
Sbjct: 90 GMDVVAVAKTGSGKTLAF------H-----GMKKHGGVEGLVVAPTRELAIQIQAECEKF 138
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVE-IVIATPGRLIDFL-EKGTTNLQRCTYLVLD 467
G + V+GGA EQ L IVI TPGRL D + ++G +L++ + +VLD
Sbjct: 139 GAERGFHSVVVYGGASAYEQKNALRSKKPCIVIGTPGRLTDLMSQEGVLSLEKLSVIVLD 198
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD------YVQINI 629
EADRMLDMGFEPQI+ I RQTL++SATWPK VRKLA YL V I
Sbjct: 199 EADRMLDMGFEPQIKTIFGATPASRQTLLFSATWPKSVRKLAACYLNQDKSRVREVFIGE 258
Query: 630 GSL--QLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
G+ +L+AN I Q ++HEK+ L L+ E+
Sbjct: 259 GAQDGELAANKAITQRFVEARDHEKDEHLYNLICEL 294
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 140 bits (340), Expect = 6e-32
Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ +G +L+ A+TGSGKT ++LP + +++ P + ALVL PTRELA Q+ Q
Sbjct: 34 AVLKGHDLIAAAETGSGKTAGFVLPLLEKLHSIPA-PGNNLTHALVLVPTRELAVQVSQS 92
Query: 282 ASEFGNSS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
+ + +R+ ++GGA Q + L +G +IV+ATPGRL+D + K +L+
Sbjct: 93 VDRYSENCPRKIRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKA 152
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
LVLDEADRMLD+GF ++ I+DQ + QTL++SAT+P +V++L E+ L + V+I++
Sbjct: 153 LVLDEADRMLDLGFADELDDILDQTPGNVQTLLFSATFPDKVKELTEELLRNPVEISV 210
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 140 bits (340), Expect = 6e-32
Identities = 76/208 (36%), Positives = 120/208 (57%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++ AQTG+GKTLA+I+PA+ + + P G L+L PTRELA Q+ V +
Sbjct: 64 GRDILATAQTGTGKTLAFIIPALEMLRDTEPC----GVQVLILVPTRELAMQVHGVYEQL 119
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
V GG +R Q + + G +V+ATPGRL D++ + +L + LVLDEA
Sbjct: 120 KGKKLKSAALVMGGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEA 179
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRM+DMGF P I++I+ + D+QTL +SAT V + +D L + V++ IGS+ A
Sbjct: 180 DRMMDMGFLPAIKRILRALPRDKQTLCFSATMGPAVSGIVQDCLYNAVRVEIGSILKPAA 239
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQ 737
L ++V +K+ +L ++ G+
Sbjct: 240 AVELHAIEVPIMGKKDALRQLLYEQEGK 267
>UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=6;
Actinomycetales|Rep: Possible ATP-dependent RNA helicase
- Rhodococcus sp. (strain RHA1)
Length = 632
Score = 140 bits (340), Expect = 6e-32
Identities = 74/169 (43%), Positives = 101/169 (59%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G N++G AQTGSGKTLA+ LP + ++ P ALVL PTRELA Q+ + +
Sbjct: 63 GTNVLGRAQTGSGKTLAFGLPMLTRLSRHEDRPAPKRPRALVLVPTRELAFQVVDSLNSY 122
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ + GG P +Q L RGV+I++ATPGRL D L +GT L LDEA
Sbjct: 123 AGAMGLTVRPAVGGTPFSKQVDQLRRGVDILVATPGRLNDHLRQGTCILDSIEITALDEA 182
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
D+M DMGF P++R I+ + R D Q L++SAT +EV+ L +L D+VQ
Sbjct: 183 DQMADMGFLPEVRAILGETRADGQRLLFSATLDREVQSLVRQFLPDHVQ 231
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 140 bits (340), Expect = 6e-32
Identities = 79/204 (38%), Positives = 118/204 (57%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 296
++++ AQTG+GKTLA+ILP + +N + P + AL++ PTRELA QI +
Sbjct: 41 RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQ-----ALIITPTRELAIQITAETKKLA 95
Query: 297 NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 476
+ +GG +Q R L+ + I+I TPGRL+D L + T NL + + LVLDEAD
Sbjct: 96 EVKGINILAAYGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEAD 155
Query: 477 RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANH 656
+ML MGF + I+ I RQ + +SAT P +VR LAE Y+ D VQI + S +++ +
Sbjct: 156 QMLHMGFLRDVEDIMTHIPKRRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVTLD- 214
Query: 657 NILQIVDVCQEHEKENKLNVLLQE 728
I Q+V + K++ L L E
Sbjct: 215 EIRQVVIETTDRGKQDLLCQLFDE 238
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 140 bits (340), Expect = 6e-32
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 2/208 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +++G+AQTG+GKT AY LP I + + P RG LV+APTRELA QI
Sbjct: 38 GHDVIGLAQTGTGKTAAYALPIIQKMLSTP---RGRVR-TLVIAPTRELACQISDSFRSL 93
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + +R ++GG +Q R L GV++V+A PGRL+D + +GT ++ L++DEA
Sbjct: 94 GQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEA 153
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG--SLQLS 647
DRM DMGF+P I+ I+ + QTL++SAT P EVRKL + + V + +G S S
Sbjct: 154 DRMFDMGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTVQVGTQSPVSS 213
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEI 731
+H++ + + H+K L +L+ +
Sbjct: 214 VSHSVYPV----KSHQKTPLLLEILKTV 237
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 140 bits (340), Expect = 6e-32
Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 19/315 (6%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRR----------------GDGPIA 233
+G++L+ AQTG+GKT A++LP + HI P+R G GP+
Sbjct: 82 EGRDLLAAAQTGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVM 141
Query: 234 LVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 413
LV+ PTRELAQQI +VA + + + V GG + Q L+ G +I++ATPGRL+D
Sbjct: 142 LVITPTRELAQQIDEVAGKIADVTGHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVD 201
Query: 414 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
+E+G +L LVLDEADRMLDMGF P +R+I+ + +RQTL++SAT +E
Sbjct: 202 LIEQGACHLDEVKVLVLDEADRMLDMGFLPAVRRIVRETPAERQTLLFSATLDEEAVGEI 261
Query: 594 EDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLL 773
D + D ++ I +A+ + Q V K N LL E + + P R + +
Sbjct: 262 TDLVSDPARVEIAPATSTAD-TVDQFVFPVSIEAKNN----LLPEFLKKEGP-ERTIVFM 315
Query: 774 KLKEKRXTXPEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CG 953
+ K + + + + A + + + +LVATDV R
Sbjct: 316 RTKHRADSCCRRLERKGIKAAAIHGNRSQAQRERALSAFRDGTVDVLVATDV-LARGIDI 374
Query: 954 MGSNFXINFDXPXXP 998
+ +NFD P P
Sbjct: 375 SDVRYVVNFDVPAEP 389
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 140 bits (340), Expect = 6e-32
Identities = 97/298 (32%), Positives = 150/298 (50%), Gaps = 3/298 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+AQTG+GKT A+ LP A++ +P R G L+LAPTREL QI +
Sbjct: 108 GRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRG---LILAPTRELVSQICESL 164
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F S+++ + GG Q + ERG ++++ATPGRLID L++ L +LVL
Sbjct: 165 RAFTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVL 224
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD+MLD+GF +RKI + +RQT+++SAT PK++ +L+ YL D ++ +
Sbjct: 225 DEADQMLDLGFIHALRKIAPLLPAERQTMLFSATMPKQMEELSRAYLTDPARVEVAPPGK 284
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMD 824
A+ I Q V E+ K +L+ +G ++D A L + K +
Sbjct: 285 IAD-KITQSVHFV---EQGAKTQLLIDLLGNHRDELA--LVFSRTKHGADRLARKLSNAG 338
Query: 825 GQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
+ A + + + +LVATDV R F NFD P P
Sbjct: 339 FETAAIHGNRSQGQRERALKAFREGTLKVLVATDVAA-RGIDIPDVRFVYNFDLPNVP 395
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 140 bits (339), Expect = 9e-32
Identities = 101/300 (33%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L GK+++G A+TGSGKT A+ LP + IN P+ + AL+L PTRELA Q+
Sbjct: 81 LLAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQ-----ALILCPTRELASQVVTEI 135
Query: 285 SEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ G ++ + GG REQA LE GV+IV+ TPGRL DF+ + +L +V
Sbjct: 136 RKLGRRLPGLKVLAMTGGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVV 195
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD+MLDMGF +I+ ++ + RQT+++SAT+P+ + L+ Y Q+ I
Sbjct: 196 LDEADKMLDMGFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQVIIE--- 252
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDM 821
N+++ + + E +K NVL++ + Q P + K E +D+
Sbjct: 253 -DEEQNLIE--QLVYDSEDNDKTNVLMRIL--QQHPSDSTIIFCNTKNAVAEIAERLNDL 307
Query: 822 DGQLCACTXTNTARKG*SXXPILKRVVS-SILVATDVGCXRS*CGMGSNFXINFDXPXXP 998
G C + ++ + R S ILVATDV R INFD P P
Sbjct: 308 -GAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDVAA-RGLDIDNLELVINFDLPLSP 365
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 140 bits (339), Expect = 9e-32
Identities = 89/232 (38%), Positives = 125/232 (53%), Gaps = 27/232 (11%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAS 287
++L+G+A TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA QI
Sbjct: 377 RDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETV 436
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+F R+ V GG QA +L +G EI+I TPGR+ D L++ T L +C Y++LD
Sbjct: 437 KFSAFCSCRSVAVVGGRNAESQAFELRKGCEIIIGTPGRVKDCLDRAYTVLSQCNYVILD 496
Query: 468 EADRMLDMGFEPQIRKIIDQI------------------------RPDRQTLMWSATWPK 575
EADRM+DMGFE ++ I+D I R R T M+SAT P
Sbjct: 497 EADRMIDMGFEDVLKYILDCIPSTNLKDRDESSALEQELSTKAGHRRYRITHMFSATMPP 556
Query: 576 EVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEI 731
V KL + YL I+IG + +I Q +D QE +K L L+ +
Sbjct: 557 AVEKLTKRYLRAPAFISIGDVG-GGKTSITQQLDFVQESKKTRHLEETLETL 607
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 140 bits (338), Expect = 1e-31
Identities = 81/208 (38%), Positives = 122/208 (58%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L QGK+L+G AQTG+GKT A+ +P + + + G ALVL PTRELA QI +
Sbjct: 35 LLQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRK---GIKALVLTPTRELAIQIGESF 91
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+G + +++ +FGG ++ Q L G++I++ATPGRL+D + +G +L + VL
Sbjct: 92 EAYGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVL 151
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF I++I+ + RQTL +SAT P E+ LA L ++ +
Sbjct: 152 DEADRMLDMGFIHDIKRILKLLPARRQTLFFSATMPPEIETLANSMLTKPEKVEVTPAS- 210
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQE 728
S I Q V ++ EK++ L LL++
Sbjct: 211 STVDIISQQVYFVEKKEKKDLLIHLLKD 238
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 140 bits (338), Expect = 1e-31
Identities = 74/204 (36%), Positives = 118/204 (57%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G++++ AQTG+GKT A+ LP + ++ +P + AL+L PTRELA Q+ S
Sbjct: 37 RGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISA 96
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ + ++GG QA+ L++G +I++ATPGRL++ + +L +LVLDE
Sbjct: 97 YSKHMNISVLTIYGGMKMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDE 156
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF I+KI+ + RQ L++SAT+ V+KLA D L D +I Q +
Sbjct: 157 ADRMLDMGFSTDIQKILQAVNKKRQNLLFSATFSTAVKKLANDML-DKPKIISADKQNTT 215
Query: 651 NHNILQIVDVCQEHEKENKLNVLL 722
+ Q+V ++ K L+ L+
Sbjct: 216 AATVSQVVYPVEQRRKRELLSELI 239
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 140 bits (338), Expect = 1e-31
Identities = 77/204 (37%), Positives = 116/204 (56%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ QGK+++ A+TG+GKT A+ LP + ++++ ++ LVL PTRELA Q+ Q
Sbjct: 34 AIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQN 93
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ + VFGG Q + L+ G++IV+ATPGRL+D + +L+ LV
Sbjct: 94 IKSYAKKLPFKTLPVFGGVSSYPQIQALKSGIDIVVATPGRLLDLALQNALSLEHIDTLV 153
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
DEADRM DMGF I++I+ + RQ L++SAT+P EV L L D ++I I Q
Sbjct: 154 FDEADRMFDMGFIHDIKQIVKMLPEKRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEE-Q 212
Query: 642 LSANHNILQIVDVCQEHEKENKLN 713
S NI+Q V + +K LN
Sbjct: 213 NSTALNIIQRVILVDRDKKMELLN 236
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 140 bits (338), Expect = 1e-31
Identities = 99/297 (33%), Positives = 160/297 (53%), Gaps = 5/297 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAS 287
G+++ G AQTG+GKTLA+++ + + ++P + R + P AL+LAPTRELA QI A
Sbjct: 46 GRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAV 105
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVL 464
+FG + +R ++GG +Q L +G ++VIATPGRLID+L++ +L+ C VL
Sbjct: 106 KFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVL 165
Query: 465 DEADRMLDMGFEPQIRKIIDQI--RPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
DEADRM D+GF IR I+ ++ R RQTL++SAT V +LA +Y+ + ++ +
Sbjct: 166 DEADRMFDLGFIKDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEKL-VAET 224
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDD 818
+ + Q + E E K+ +LL + +++ G R + + K D+
Sbjct: 225 ETVTTTRVRQRIYFPAE---EEKIPLLLGLLSRSE--GMRTMVFVNTKVFVEGVARALDE 279
Query: 819 MDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
++ + RK + ++ ILVATDV R G N+ N+D P
Sbjct: 280 AGYRVGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAA-RGLHIDGVNYVYNYDLP 335
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 139 bits (337), Expect = 1e-31
Identities = 75/189 (39%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +GK+++G+AQTG+GKT A+ LP + N+ +R P LVLAPTRELAQQ+
Sbjct: 40 LLEGKDVLGLAQTGTGKTAAFTLPLLARTQNE--VRE---PQVLVLAPTRELAQQVAMAV 94
Query: 285 SEFG-NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ + S V+ ++GG+ Q R L++G + V+ TPGR++D + +GT L+ +V
Sbjct: 95 ESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVV 154
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD ML MGF + ++DQ+ RQ ++SAT PK+++ +AE +L + +I I S +
Sbjct: 155 LDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQIKAVAEKHLREPTEIRIKS-K 213
Query: 642 LSANHNILQ 668
+ N +I Q
Sbjct: 214 TATNESIEQ 222
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 139 bits (337), Expect = 1e-31
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 2/174 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 287
G++L+G+AQTG+GKT A+ LP + + + +P RRG LVL+PTRELA QI +
Sbjct: 102 GRDLLGIAQTGTGKTAAFALPILHRLAEDKKPAPRRGFR--CLVLSPTRELATQIAESFR 159
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
++G + +FGG Q + L GV++V+ATPGRL+D L + + +L VLD
Sbjct: 160 DYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLD 219
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
EAD+MLD+GF IRKI Q+ +RQ L +SAT P E+ KLA + L + Q+ I
Sbjct: 220 EADQMLDLGFVVPIRKIASQLPKERQNLFFSATMPSEIGKLAGELLKNPAQVAI 273
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 139 bits (337), Expect = 1e-31
Identities = 78/206 (37%), Positives = 116/206 (56%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++LV AQTG+GKT A+ LP + + P GP LVL PTREL Q++ +F
Sbjct: 38 GRDLVASAQTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTRELGAQVETAFRDF 93
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + VR+T + GG +Q DL G +IVIAT GRL+DF+++ L L+LDE
Sbjct: 94 GRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVGRLMDFIKEKEIRLDSVEVLILDEV 153
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF +++I+ RQTL +SAT P E+ +A L + +I IG + + N
Sbjct: 154 DRMLDMGFINDVKRIVGLCPKQRQTLFFSATIPPEIEDVARFALQNPERIEIGRAR-TVN 212
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEI 731
++ + +K + L +L ++
Sbjct: 213 ESVKHAIYPVTFEQKFDLLCAILDKL 238
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 139 bits (337), Expect = 1e-31
Identities = 79/186 (42%), Positives = 109/186 (58%), Gaps = 5/186 (2%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
Q ++ +GVA TGSGKTLA++LP + H+ Q G P LVLAPTREL QI A +
Sbjct: 142 QMRDTIGVAATGSGKTLAFLLPGMAHVAAQV----GTEPRMLVLAPTRELVMQIATEAEQ 197
Query: 291 FGNSSYVRNTCVFGG----APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
F +R FGG + Q+R L RGV++++ TPGRL F E L+ +YL
Sbjct: 198 FALGFRLRLGLAFGGQDGEGDQMMQSRVLRRGVDVLVGTPGRLTKFAEASVVYLREVSYL 257
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
V+DEAD+ML GFEPQI++++ P+RQ ++SATWP V A + V+I +
Sbjct: 258 VIDEADQMLTDGFEPQIQEVLALTHPNRQVSLFSATWPPAVEAFAASVVDQPVRIVVDRA 317
Query: 639 Q-LSAN 653
L+AN
Sbjct: 318 DVLTAN 323
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 139 bits (336), Expect = 2e-31
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 296
K+++G+AQTG+GKT A++LP + + R P L+L PTRELA Q+++ +G
Sbjct: 39 KDVLGIAQTGTGKTAAFVLPMLTILEKGRA--RARMPRTLILEPTRELAAQVKENFDRYG 96
Query: 297 NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 476
+ + GG +Q L RGV+++IATPGRL+D E+G L LV+DEAD
Sbjct: 97 AGQKLNVALLIGGVSFGDQDAKLTRGVDVLIATPGRLLDHTERGGLLLTGVELLVIDEAD 156
Query: 477 RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA-N 653
RMLDMGF P I +I + RQTL ++AT P E+R++ E +L + ++ + +A
Sbjct: 157 RMLDMGFIPDIERICKLVPFTRQTLFFTATMPPEIRRITETFLHNPQKVEVSKPATTAVT 216
Query: 654 HNILQIVDVCQEHEKENKLNVLLQE 728
Q+ + HEK L LL+E
Sbjct: 217 VTQSQVPAGKKAHEKRELLRRLLRE 241
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 139 bits (336), Expect = 2e-31
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 8/199 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPI----RRGDG--PIALVLAPTRELAQQIQ 275
GK++VG A+TG GKTLA++LP + + P+ RR G P+ +VLAPTRELA+Q+
Sbjct: 120 GKDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVF 179
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
GNS ++ CV+GG P REQ L G ++VI TPGR+ D LE+ T + + +
Sbjct: 180 ADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMKDHLERKTLMMDKLKF 239
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL-XDYVQIN-I 629
VLDEAD ML+MGF + I+ + D QTL++SAT P V+ +A+ +L DY ++ +
Sbjct: 240 RVLDEADEMLNMGFVDDVELIL-KSSGDVQTLLFSATLPPWVKDIAKRFLKPDYATVDLV 298
Query: 630 GSLQLSANHNILQIVDVCQ 686
G + A+ + ++ CQ
Sbjct: 299 GDQKQKASGAVQHMLLPCQ 317
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 138 bits (335), Expect = 3e-31
Identities = 85/206 (41%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
G +L+ AQTGSGKT+ + L A + R P+ALV+APTRELA Q+++ S
Sbjct: 39 GADLLVSAQTGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELALQVKRELSW 98
Query: 291 -FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+G++ V +CV GG R++ R LERG IV+ATPGRL D + +G+ +L +VLD
Sbjct: 99 LYGDAGAVLASCV-GGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLD 157
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
EAD MLD+GF + I+++ DRQTL++SAT K + LA+ Y D +I+ ++ S
Sbjct: 158 EADEMLDLGFREDLEFILEETPEDRQTLLFSATVSKPIAALAQTYQNDAQRIS--TINKS 215
Query: 648 ANH-NILQIVDVCQEHEKENK-LNVL 719
H +I + V H+ EN +NVL
Sbjct: 216 EQHSDISYLAHVVAPHDIENAIINVL 241
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 138 bits (335), Expect = 3e-31
Identities = 90/205 (43%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +LV AQTG+GKT AY+LP + I D LVL PTRELA QI Q
Sbjct: 35 IMSNSDLVACAQTGTGKTAAYMLPILHKIIES----NTDSLDTLVLVPTRELAIQIDQQI 90
Query: 285 SEFGNSSYVRNTCVFGG---APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
F V + V+GG A +Q + L G IVIATPGRL+ L+ GT NL++ +
Sbjct: 91 EGFSYFINVSSIAVYGGGDGATWDQQRKALTDGANIVIATPGRLLAQLQSGTANLKQIKH 150
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LVLDEADRMLDMGF I ++I + +RQT+M+SAT P ++R LA + D QINI
Sbjct: 151 LVLDEADRMLDMGFYDDIVRVISYLPTERQTIMFSATMPTKMRALANKLMKDPQQINIAI 210
Query: 636 LQLSANHNILQIVDVCQEHEKENKL 710
+ + ILQ + E E++NKL
Sbjct: 211 SKPA--EGILQQAYLVYE-EQKNKL 232
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 138 bits (335), Expect = 3e-31
Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVASE 290
G++++G AQTG+GKT A+ P + + P R PI +L+L PTRELA QIQ+
Sbjct: 38 GRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGR---PIRSLILTPTRELALQIQESFEA 94
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+G +R+ +FGG ++ Q L++GV+I++ATPGRL+D +G +L R VLDE
Sbjct: 95 YGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDE 154
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
ADRMLDMGF +R+++ + +QTL +SAT P EV L L + V++ +
Sbjct: 155 ADRMLDMGFLHDVRRVLKLLPAVKQTLFFSATMPPEVMDLVNGLLKNPVKVAV 207
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 138 bits (335), Expect = 3e-31
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQP----PIRR-GDGPIALVLAPTRELAQQIQ 275
QG++++ A+TG+GKTLA+ +P I + + RR G P LVLAPTRELA+Q++
Sbjct: 138 QGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVE 197
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
+ E ++ Y+ CV+GG Q L RGV++V+ TPGR+ID +E + L Y
Sbjct: 198 KEIKE--SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEY 255
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
LVLDEAD+ML +GFE + I++ + RQ++++SAT P V+KLA YL + + I++
Sbjct: 256 LVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDL 313
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 138 bits (335), Expect = 3e-31
Identities = 85/232 (36%), Positives = 129/232 (55%), Gaps = 24/232 (10%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQV 281
Q ++L+GVA+TGSGKT A+++P + +I + PP+ R GP AL++APTRELAQQI+
Sbjct: 351 QNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETE 410
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
F + + GG EQ L G EI+IATPGRL D ++K + +C Y+V
Sbjct: 411 TRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRYVV 470
Query: 462 LDEADRMLDMGFEPQIRKIIDQ-----IRPD----------------RQTLMWSATWPKE 578
+DEADRM+D+GFE + I+D ++PD R T ++SAT P
Sbjct: 471 MDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWRVTTLFSATMPPA 530
Query: 579 VRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
V +LA YL + IG+ + + ++ V + +K+ +L +L+ IG
Sbjct: 531 VERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKARLIEILRTIG 582
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 138 bits (334), Expect = 3e-31
Identities = 72/164 (43%), Positives = 104/164 (63%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +L+G AQTG+GKT ++ +P + N+ + +G+G ALVL PTRELA Q+ + S
Sbjct: 41 GLDLMGQAQTGTGKTASFGIPIL----NR--VIKGEGLQALVLCPTRELAVQVTEEISSL 94
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
++ ++GG Q R L R EI++ TPGRL+D + +GT +L Y+VLDEA
Sbjct: 95 SRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEA 154
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 605
D MLDMGF P I+KI+ Q +RQT ++SAT P EVR+L ++
Sbjct: 155 DEMLDMGFLPDIQKILSQCPRERQTFLFSATLPDEVRELGTKFM 198
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 138 bits (333), Expect = 5e-31
Identities = 77/213 (36%), Positives = 128/213 (60%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
Q K+LV +QTGSGKT ++ +P + + + P ALVL PTRELA Q+++ +
Sbjct: 40 QKKDLVVKSQTGSGKTASFGIPLCEMVEWEE-----NKPQALVLTPTRELAVQVKEDITN 94
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
G ++ ++G +P Q +L++ IV+ TPGR++D +EKGT +L+R YLV+DE
Sbjct: 95 IGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDE 154
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
AD ML+MGF Q+ IID++ R T+++SAT P++V +L+ Y+ I I + ++
Sbjct: 155 ADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITT 214
Query: 651 NHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
+ +I E +E KL+ LL+++ ++P
Sbjct: 215 D----KIEHTLFEVREEEKLS-LLKDVTTIENP 242
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 138 bits (333), Expect = 5e-31
Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L G++LVG AQTG+GKT A+ LP + + + P LVLAPTRELA Q+
Sbjct: 105 LMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKT-----PQVLVLAPTRELAMQVADSF 159
Query: 285 SEFG-NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ +++ V+GG R Q L RGV++V+ TPGR++D + +GT + T LV
Sbjct: 160 KAYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLV 219
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD ML MGF + I++Q+ +RQ +++SAT P E+R+L++ YL D ++ I +
Sbjct: 220 LDEADEMLRMGFIDDVEWILEQLPKERQVVLFSATMPPEIRRLSKRYLNDPAEVTIKTKD 279
Query: 642 LSANHNILQIVDVCQEHEKENKLNVL 719
+ + V H+ E VL
Sbjct: 280 QDGKLIRQRAITVPMSHKLEALQRVL 305
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 138 bits (333), Expect = 5e-31
Identities = 68/166 (40%), Positives = 99/166 (59%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G A+TGSGKTL + LP + + Q R P LVL PTRELA Q+
Sbjct: 183 GRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPL 242
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G+S +R + V GG P Q L+RG++++IATPGRL+D +++ +L VLDEA
Sbjct: 243 GDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVLDEA 302
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD 611
D M D+GF P +R I++ +P Q + +SAT + V L D+L D
Sbjct: 303 DHMADLGFLPNVRAILEGTKPGGQRMFFSATLDRGVEALVTDFLTD 348
>UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 697
Score = 138 bits (333), Expect = 5e-31
Identities = 82/242 (33%), Positives = 135/242 (55%), Gaps = 14/242 (5%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH------------INNQPPIRRGDGPIALVLA 245
++ G +++G + GSGKTL Y+ P I H I + ++ G + LVL
Sbjct: 239 AILTGHDIIGTSLPGSGKTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLV 298
Query: 246 PTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRLIDFLE 422
PTREL Q+ ++ + ++GG K Q LE+ +I+I+TPGRLI+ +E
Sbjct: 299 PTRELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIE 358
Query: 423 KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDY 602
G +L T LVLDEAD+ML G PQ+++I QIRPD Q +++SAT+P ++++++D+
Sbjct: 359 NGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDW 418
Query: 603 LXD-YVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKL 779
+ D +++ IGS +L ++I Q + H+K L LL E Q ++ ++ K+
Sbjct: 419 IKDPSIRLRIGSSELPKLNHIQQDAQLIAHHKKPRALIKLLSE-PQFKEKKKTIVFFNKI 477
Query: 780 KE 785
KE
Sbjct: 478 KE 479
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 137 bits (332), Expect = 6e-31
Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
+G +++G AQTG+GKT A+ INN + P AL+LAPTRELA Q+ +
Sbjct: 40 EGHDIIGQAQTGTGKTAAF---GCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVR 96
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
G + ++GG P Q R L+ GV+IV+ TPGR++D + + + L +LVLDE
Sbjct: 97 LGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDE 156
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD---YVQINIGSLQ 641
AD ML+MGF + +I+ ++ DRQTL++SAT P +++KLA +Y+ + ++ I SL
Sbjct: 157 ADEMLNMGFIDDLEEIVKSLKTDRQTLLFSATMPPQIKKLARNYMKEDTKHIAIKKSSLT 216
Query: 642 LS 647
+S
Sbjct: 217 VS 218
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 137 bits (332), Expect = 6e-31
Identities = 71/175 (40%), Positives = 105/175 (60%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +GK+L+G+A TG+GKT A+ LP + I P ALVL PTRELA Q+ +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRIT--PGAHAPFTASALVLVPTRELAMQVAEAI 127
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+G + ++GG +Q R L+RGV++V+ATPGR +D L++ T L++ +VL
Sbjct: 128 HRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVL 187
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
DEAD MLDMGF + I+ RQT ++SAT P + +AE +L + V++ I
Sbjct: 188 DEADEMLDMGFAEDLEAILSSTPEKRQTALFSATLPPRIASIAERHLREPVRVRI 242
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 137 bits (332), Expect = 6e-31
Identities = 94/294 (31%), Positives = 160/294 (54%), Gaps = 3/294 (1%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFG 296
K+LV +QTGSGKT ++ +P + + N + P AL+L PTRELA Q+++ + G
Sbjct: 40 KDLVVKSQTGSGKTASFGIP-LCELANWDENK----PQALILTPTRELAVQVKEDITNIG 94
Query: 297 NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 476
++ T VFG + +Q +L++ IV+ TPGR++D +EKGT L R +YLV+DEAD
Sbjct: 95 RFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEAD 154
Query: 477 RMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANH 656
ML+MGF Q+ II + +R T+++SAT P+++ KL+ Y+ + I + + L+ +
Sbjct: 155 EMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRN 214
Query: 657 NILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQLC 836
++ V +ENK + LL+++ ++P + ++ + KE +++D++D
Sbjct: 215 IEHAVIQV----REENKFS-LLKDVLMTENPDSCIIF-CRTKEH---VNQLTDELDDLGY 265
Query: 837 ACTXTNTARKG*SXXPIL---KRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
C + ++ KR LVATDV R + IN+D P
Sbjct: 266 PCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAA-RGIDIENISLVINYDLP 318
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 137 bits (331), Expect = 8e-31
Identities = 71/171 (41%), Positives = 103/171 (60%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++G A+TG+GKT A+ +P + +++ R P A+V+ PTRELA Q+ A
Sbjct: 81 GKDVIGQARTGTGKTAAFSIPILEQLDSLEDCR---DPQAIVIVPTRELADQVAAEAERL 137
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ GG Q R LE G ++V+ TPGR+ D L++GT +VLDEA
Sbjct: 138 ARGVPTEIAVLSGGKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEA 197
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
DRMLD+GF PQI +I+ + +RQTL+ SAT P VR+LAE Y+ + V I+
Sbjct: 198 DRMLDIGFRPQIERIMRKCPRNRQTLLLSATLPPVVRRLAESYMHEPVVID 248
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 137 bits (331), Expect = 8e-31
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 1/208 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L G++L+G AQTG+GKT A+ LP I + + + LV+ PTRELA Q+ +
Sbjct: 85 LMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAK----VLVMTPTRELATQVAESF 140
Query: 285 SEFGN-SSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+ + S+ + ++GG R Q L+R V++V+ TPGR++D + +GT + LV
Sbjct: 141 KSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLV 200
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD ML+MGF I IIDQ+ ++Q +++SAT P E+R +A+ YL D +I I S++
Sbjct: 201 LDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMPNEIRNIAKKYLNDPAEILIKSVK 260
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQ 725
I Q Q H K + L +L+
Sbjct: 261 -KETQLISQKFLYVQRHHKLDALKRILE 287
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 137 bits (331), Expect = 8e-31
Identities = 78/168 (46%), Positives = 103/168 (61%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G A TGSGKTLA+ LP +V + RRG P +VL PTRELA QI++ E
Sbjct: 51 GRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRGF-PRGIVLVPTRELALQIERALDEP 108
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
S +R V GG P + Q L RGV+++IATPGRL D + +G+ +L T L LDEA
Sbjct: 109 ALSVGLRVANVVGGIPIKRQVEILSRGVDLLIATPGRLADHVAQGSVSLDDVTVLALDEA 168
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
D M D+GF PQ+ I+D+ D Q L++SAT EV L YL D V
Sbjct: 169 DHMADLGFMPQVTTILDKTPADGQRLLFSATLDGEVDTLVRRYLRDPV 216
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa protein
- Apis mellifera (Honeybee)
Length = 630
Score = 137 bits (331), Expect = 8e-31
Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 8/303 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQI 272
+ G++L+ AQTGSGKT A+ +P I + + P ++++PTREL QI
Sbjct: 230 IMNGRDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQI 289
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
Q +F +S ++ +GG Q L G I++ATPGRL+DF+EKG
Sbjct: 290 WQQIVKFSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQ 349
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQ--IRP--DRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
+LVLDEADRMLDMGF P I K++D + P +RQTLM+SAT+P EV+ LA +L +Y+
Sbjct: 350 FLVLDEADRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEVQHLARRFLNNYLF 409
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTX 800
+ +G + A ++ Q ++K++ L +L+ + G L +++K+K
Sbjct: 410 LAVGIVG-GACSDVEQNFYEVARNKKKDLLKEILERENDSGTLGG-TLVFVEMKKKADFI 467
Query: 801 PEISDDMDGQLCACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINF 980
+ + + R+ K SILVAT V R + IN+
Sbjct: 468 AVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAA-RGLDIKNVSHVINY 526
Query: 981 DXP 989
D P
Sbjct: 527 DLP 529
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 137 bits (331), Expect = 8e-31
Identities = 69/164 (42%), Positives = 104/164 (63%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +LV ++TGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+
Sbjct: 39 GSDLVVRSKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEAL 92
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G S +R V+GG +Q + RG I++ TPGR +D +++G N + +Y VLDEA
Sbjct: 93 GKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEA 152
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYL 605
D MLDMGF I+KII+ + +RQ+ ++SAT P E+ +LA+ ++
Sbjct: 153 DEMLDMGFIEDIKKIINVLPVERQSFLFSATIPSEIIELAKGFM 196
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 136 bits (330), Expect = 1e-30
Identities = 74/185 (40%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVH-INNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
+L G++++G AQTG+GKT A+ LP + + NQ P LVLAPTRELA Q+ +
Sbjct: 48 ALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVK------PQVLVLAPTRELAIQVAE 101
Query: 279 VASEFGNS-SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
+ S S R V+GG +Q L+RGV +++ TPGR+ID LE+GT +L
Sbjct: 102 AFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKT 161
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LVLDEAD ML MGF + +++ ++ RQ ++SAT P ++R++A+ YL D +++ I +
Sbjct: 162 LVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIAT 221
Query: 636 LQLSA 650
+A
Sbjct: 222 KTTTA 226
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 136 bits (330), Expect = 1e-30
Identities = 76/206 (36%), Positives = 118/206 (57%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +G +L+G+AQTG+GKT A+ LP + +++ P L+L PTRELA QI +
Sbjct: 38 ILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENI 97
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
+ +++ +FGG + Q R L+ GV+I+IATPGRL+D + L R VL
Sbjct: 98 EAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMDLHGQKHLKLDRVEIFVL 157
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADRMLDMGF I+KI+ + R L +SAT P E++ LA L + ++ + +
Sbjct: 158 DEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQTLANRILVNPKKVEVTPVSS 217
Query: 645 SANHNILQIVDVCQEHEKENKLNVLL 722
+A +++ V +K KL++LL
Sbjct: 218 TAEKVEQRVMFV----DKPQKLDLLL 239
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 136 bits (330), Expect = 1e-30
Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 2/216 (0%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ +GK+++G+AQTGSGKT +++LP I+ + P+ + ALVL PTRELA Q+ QV
Sbjct: 42 AILKGKDILGIAQTGSGKTASFVLP-ILQMLQTKPLGKNRHINALVLVPTRELAVQVGQV 100
Query: 282 ASEFGNS--SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 455
F N+ + +++ V+GG Q L+ GVEI+IATPGRL+D ++ L
Sbjct: 101 FQAFSNALPNKIKSLAVYGGVSINPQMIQLQ-GVEILIATPGRLLDLVDSKAVYLSDVEV 159
Query: 456 LVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGS 635
LVLDEAD+ML++GF+ ++ I + RQ L++SAT K+V + E L D V+I I +
Sbjct: 160 LVLDEADKMLNLGFKEEMANIFKLLPQKRQNLLFSATLGKDVDTITEFLLHDPVKIEIIA 219
Query: 636 LQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+ + + I QI ++ K L L++E NQ
Sbjct: 220 EEQNID-LIQQIAYAVEDARKGPLLRYLIKEQKMNQ 254
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 136 bits (330), Expect = 1e-30
Identities = 74/173 (42%), Positives = 104/173 (60%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
Q K+++G+AQTG+GKT +++LP + + R P L+L PTRELA Q+++ +
Sbjct: 42 QHKDVLGIAQTGTGKTASFVLPMLTLLEKGRAKARM--PRTLILEPTRELAAQVKENFDK 99
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+G + + + GG Q R LERG +++IATPGRL+D E+GT L LV+DE
Sbjct: 100 YGINHRLNVALLIGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLLMGVEILVIDE 159
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
ADRMLDMGF P I +I RQTL +SAT E+ KL E +L V + I
Sbjct: 160 ADRMLDMGFIPDIERICKLTPFTRQTLFFSATMAPEIIKLTEQFLHSPVCVEI 212
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 136 bits (329), Expect = 1e-30
Identities = 75/215 (34%), Positives = 126/215 (58%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +G+NLV ++TGSGKT ++ +P +IN + AL++ PTRELA Q++
Sbjct: 37 LLKGQNLVVRSKTGSGKTASFAIPLCENINVDY-----NNIQALIVVPTRELALQVKDEI 91
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
S+ G VR + +FG ++Q +L++ V IV+ATPGR++D + +G+ L+ YLV+
Sbjct: 92 SDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVI 151
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEAD+M + GF Q+ KI+ + ++ ++SAT +E++ + E Y+ DY INI +
Sbjct: 152 DEADKMFNKGFVEQMEKILLNLPKEKIVSLFSATIDEEIKYICEKYMLDYSVINIEENES 211
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDP 749
N QI D + K +LL+E+ +++P
Sbjct: 212 DTNQKTRQIDDKIIKANGREKY-ILLKELIYSENP 245
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 136 bits (329), Expect = 1e-30
Identities = 79/210 (37%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G AQTG+GKT ++ LP + ++++ R P +L+L PTRELA Q+ + ++
Sbjct: 260 GRDVLGCAQTGTGKTASFTLPMMDILSDRRA--RARMPRSLILEPTRELALQVAENFVKY 317
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + + + GG +Q L +GV+++IATPGRLID ++G L LV+DEA
Sbjct: 318 GQYLKLNHALLIGGESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEA 377
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGF P + +I+ + +RQTL +SAT E+R+LA+ +L + +I + S
Sbjct: 378 DRMLDMGFIPDVERIVSLLPHNRQTLFFSATMAPEIRRLADAFLQNPKEITVAK-PASVA 436
Query: 654 HNILQIVDVCQEHEKENKLNVLL-QEIGQN 740
I + + E +K L LL QE QN
Sbjct: 437 TTITSGLALVGEMDKRKALRHLLRQEKVQN 466
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 136 bits (329), Expect = 1e-30
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 1/208 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ G++++G AQTG+GKT A+ LP I NN R P LVLAPTRELA Q+ +
Sbjct: 41 ILSGRDVLGQAQTGTGKTAAFALPLI---NNMDLASRDRAPQVLVLAPTRELAIQVAEQF 97
Query: 285 SEFG-NSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
F N + C++GG Q R L++GV++V+ T GR++D +EKGT L LV
Sbjct: 98 EAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALV 157
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEAD ML MGF ++ ++ + + Q L++SAT P ++ + E+YL + +I + +
Sbjct: 158 LDEADEMLRMGFIDDVKFVLSHVSDECQRLLFSATIPTDIADIIEEYLRNPCKIQVKAKT 217
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQ 725
+AN + Q V + K + L+ LL+
Sbjct: 218 KTAN-TVTQKFIVIKGFRKIDALDRLLE 244
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 136 bits (328), Expect = 2e-30
Identities = 67/172 (38%), Positives = 107/172 (62%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G +++GVAQTG+GKT AY LP ++ I +G P A++ PTREL QI+ +
Sbjct: 42 GHDIIGVAQTGTGKTAAYALPILMKIK----YAQGHNPRAVIFGPTRELVMQIEIAMKQL 97
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ +R ++GG + Q L++GV+I++ATPGR +D + L+ +VLDEA
Sbjct: 98 AKYTDLRIVALYGGIGPKLQKEHLQKGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEA 157
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINI 629
D+M+DMGF PQ+RK+++ I RQ L++SAT + V +L E++L ++I +
Sbjct: 158 DKMMDMGFMPQLRKMLEVIPRKRQNLLFSATMSERVERLTEEFLEYPMKIEV 209
>UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 536
Score = 136 bits (328), Expect = 2e-30
Identities = 67/208 (32%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Frame = +3
Query: 120 NLVGVAQTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAS 287
+++G++Q G+GKTLAY++P + +I N P P+++VL PT ELA Q+Q+V
Sbjct: 179 DIIGLSQPGTGKTLAYVIPLLYYILEYKKNHPETNNFSIPLSVVLVPTHELAVQVQEVID 238
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+ G + +++ + G +QA +L +++ATPGRL D +E ++++ ++V+D
Sbjct: 239 KLGINLGIKSRTLTGSFRLNDQALELSHENHVIVATPGRLKDAIEAHLVSVKKVFFIVMD 298
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
EAD+M+D PQI I+++ ++ +M+SAT P EV + E++ V +++G +
Sbjct: 299 EADKMVDKSLGPQISFILNECPKEKHLMMFSATMPHEVLSIVEEFFTKVVTVSVGEIG-G 357
Query: 648 ANHNILQIVDVCQEHEKENKLNVLLQEI 731
A+ NI Q+V C++ ++L +LL+ +
Sbjct: 358 ASENIKQVVHYCRQ---ADRLGLLLKSL 382
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 135 bits (327), Expect = 2e-30
Identities = 71/168 (42%), Positives = 101/168 (60%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++G +TGSGKTLA+ L + + R P+ LVL PTRELAQQ+ + +
Sbjct: 106 GRDIMGRGRTGSGKTLAFGLALLARTAGRRAEPRQ--PLGLVLVPTRELAQQVTDALTPY 163
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
S +R V GG QA L G E+V+ATPGRL D +++G L + + VLDEA
Sbjct: 164 ARSVKLRLATVVGGMSIGRQASALRGGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEA 223
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
D+M DMGF PQ+ ++DQ+RP+ Q +++SAT + V L YL D V
Sbjct: 224 DQMADMGFMPQVTALLDQVRPEGQRMLFSATLDRNVDLLVRRYLSDPV 271
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 135 bits (326), Expect = 3e-30
Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Frame = +3
Query: 42 SGIPRAAGNSARGTGSRXGQSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 221
SGI +A + ++ QG+++VG+AQTG+GKT AY LP + + PP
Sbjct: 26 SGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPP----- 80
Query: 222 GPI-ALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIAT 395
G + AL+L+PTR+LA QI + FG +++R ++GG Q + L GV+I++A
Sbjct: 81 GQLRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQLLTGGVDIIVAC 140
Query: 396 PGRLIDFLEKGTTN-LQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWP 572
PGRL+D L+ N LQ+ +LVLDEAD + D GF I I+ + P RQ L++SAT
Sbjct: 141 PGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPRRQNLLFSATMS 200
Query: 573 KEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
++R L + L V+I IG + + I Q + E K N L +LQ
Sbjct: 201 ADIRLLIDKVLHRPVRIQIGEPKPAV--TITQTLFPVSETLKVNLLETILQ 249
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 135 bits (326), Expect = 3e-30
Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
++L+ AQTGSGKT+AY L A + + + P+AL++APTRELA Q+QQ
Sbjct: 81 RDLLVSAQTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQELLWL 140
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+ R GG R +A+ LERG IV+ TPGRL D L +G NL R +VLDEA
Sbjct: 141 YGPAGARVVSCIGGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEA 200
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
D MLD+GF ++ +I+D +R+TL++SAT +E+ LA+ Y + ++I+ S
Sbjct: 201 DEMLDLGFRDELEEILDATPAERRTLLFSATIAREIAALAKRYQTNALRIDTVSRNKPHA 260
Query: 654 HNILQIVDVCQEHEKENKLNVL 719
++V V + + +NVL
Sbjct: 261 DIDYRVVRVLPHEARHSVVNVL 282
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 135 bits (326), Expect = 3e-30
Identities = 74/214 (34%), Positives = 123/214 (57%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ +G++++ AQTG+GKT + LP ++ I ++ + + ALVL PTRELA Q+ +
Sbjct: 38 AILEGQDVMAAAQTGTGKTAGFTLP-LLEILSKGENAQSNQVRALVLTPTRELAAQVAES 96
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
+G +++T VFGG Q L RG +I+IATPGR++D + + LV
Sbjct: 97 VKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLV 156
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
LDEADRMLDMGF I+KI+ + RQ L++SAT+ E+R+LA+ + + ++I++
Sbjct: 157 LDEADRMLDMGFIHDIKKILAILPKKRQNLLFSATFSPEIRQLAKGLVNNPIEISV---- 212
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
N + + +K+ K +L+Q I +
Sbjct: 213 TPRNATAVSVEQWLHPVDKKRKTELLIQLIADGR 246
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,262,426,781
Number of Sequences: 1657284
Number of extensions: 24807460
Number of successful extensions: 58395
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 51854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56161
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 158488833675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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