Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_B12_e90_04.seq
(1494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 294 9e-80
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 208 8e-54
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 201 1e-51
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 180 2e-45
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 175 9e-44
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 175 9e-44
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 175 9e-44
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 162 5e-40
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 159 4e-39
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 157 3e-38
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 136 3e-32
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 136 3e-32
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 136 3e-32
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 134 2e-31
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 134 2e-31
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 134 2e-31
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 133 4e-31
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 133 4e-31
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 126 5e-29
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 122 7e-28
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 120 2e-27
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 120 2e-27
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 118 1e-26
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 118 1e-26
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 116 6e-26
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 108 1e-23
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 107 2e-23
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 107 2e-23
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 105 6e-23
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 105 8e-23
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 95 1e-19
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 93 5e-19
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 92 8e-19
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 92 8e-19
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 91 2e-18
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 89 8e-18
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 89 8e-18
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 89 1e-17
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 88 1e-17
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 87 2e-17
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 83 4e-16
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 80 5e-15
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 80 5e-15
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 69 7e-12
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 66 6e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 65 1e-10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 64 2e-10
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 58 2e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 56 5e-08
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 52 8e-07
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 52 1e-06
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 46 7e-05
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 38 0.024
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 37 0.042
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 37 0.042
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 31 1.6
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical pr... 31 2.8
Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 8.5
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein
F58E10.3a protein.
Length = 561
Score = 294 bits (722), Expect = 9e-80
Identities = 152/292 (52%), Positives = 201/292 (68%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++ +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ +F
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
+S ++ TC+FGGA K QARDLERGV+IV+ATPGRL+DFL+ GTTN+++C+YLVLDEA
Sbjct: 226 CHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEA 285
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
DRMLDMGFEPQI+KII QIRPDRQTLM+SATWPKEVR LA D+ D +N+GSL+L+AN
Sbjct: 286 DRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAAN 345
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEISDDMDGQL 833
HNI Q+VD+ +EH K+ KL LL I NQ +++ ++ + D L
Sbjct: 346 HNITQVVDILEEHAKQAKLMELLNHI-MNQKECKTIIFVETKRKADELTRAMRRDGWPTL 404
Query: 834 CACTXTNTARKG*SXXPILKRVVSSILVATDVGCXRS*CGMGSNFXINFDXP 989
C N + K + I++ATDV R F IN+D P
Sbjct: 405 CIHGDKNQGERD-WVLQEFKAGKTPIMLATDV-AARGLDVDDIKFVINYDYP 454
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 208 bits (508), Expect = 8e-54
Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 3/210 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S+ G++++G+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q +
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCT 452
A++F ++ C +GG EQ DL+RG EIV+ TPGR+ID L + TNL+R T
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVT 456
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIG 632
YLVLDEADRM D GFEPQI K+++ IRPD+QT+++SAT+P+ + LA L V+I +G
Sbjct: 457 YLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVG 516
Query: 633 SLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+ + +I Q +C EH+K KL LL
Sbjct: 517 GKSVVCS-DITQNAVICAEHQKFLKLLELL 545
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical protein
C46F11.4 protein.
Length = 811
Score = 201 bits (490), Expect = 1e-51
Identities = 117/279 (41%), Positives = 170/279 (60%), Gaps = 3/279 (1%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
S G++++G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q
Sbjct: 298 SALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQE 357
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
A +F + C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+L
Sbjct: 358 AKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFL 417
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
V DEADRM DMGFE Q++ I D +RPDRQ LM+SAT+ ++V +LA D L D V+I G +
Sbjct: 418 VFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEV 477
Query: 639 QLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQDPGARPLYLLKLKEKRXTXPEIS-D 815
AN +I Q V V Q ++ KL+ L++ + + G +++ K + ++
Sbjct: 478 G-EANADIEQKVFVMQ--NQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMK 534
Query: 816 DMDGQLCACTXTNTARKG*SXXPILK-RVVSSILVATDV 929
D D L R +LK R S ILVATDV
Sbjct: 535 DFDIVLLHGDMLQAERN----ENLLKFRKKSQILVATDV 569
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 180 bits (439), Expect = 2e-45
Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 6/197 (3%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQ 266
L G++ +GV+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQ
Sbjct: 118 LLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQ 177
Query: 267 QIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
QI+ ++ + Y ++ C++GG + EQ GVEIVIATPGRL D G +L
Sbjct: 178 QIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLAS 236
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
TY+VLDEADRMLDMGFE IR+I+ +IRPDR + SATWP+ VRKL + Y + V
Sbjct: 237 VTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAV 296
Query: 627 IGSLQLSANHNILQIVD 677
GSL L++ ++ Q +
Sbjct: 297 NGSLDLTSCKSVTQFFE 313
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 175 bits (425), Expect = 9e-44
Identities = 105/229 (45%), Positives = 145/229 (63%), Gaps = 16/229 (6%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPT 251
+L ++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 172 TLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231
Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKG 428
RELA QI + A++F S ++ ++GG R+Q L G I+IATPGRLID +E+G
Sbjct: 232 RELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG 291
Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAED 599
L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+PKE++ LA+D
Sbjct: 292 FIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKD 351
Query: 600 YLXD-YVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
+L D Y+ + +G + S + NI Q ++ V + ++ N + +L+ E +N
Sbjct: 352 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEILMNEHSEN 399
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 175 bits (425), Expect = 9e-44
Identities = 105/229 (45%), Positives = 145/229 (63%), Gaps = 16/229 (6%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPT 251
+L ++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 156 TLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 215
Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKG 428
RELA QI + A++F S ++ ++GG R+Q L G I+IATPGRLID +E+G
Sbjct: 216 RELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG 275
Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAED 599
L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+PKE++ LA+D
Sbjct: 276 FIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKD 335
Query: 600 YLXD-YVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
+L D Y+ + +G + S + NI Q ++ V + ++ N + +L+ E +N
Sbjct: 336 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEILMNEHSEN 383
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 175 bits (425), Expect = 9e-44
Identities = 105/229 (45%), Positives = 145/229 (63%), Gaps = 16/229 (6%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPT 251
+L ++L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 153 TLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 212
Query: 252 RELAQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKG 428
RELA QI + A++F S ++ ++GG R+Q L G I+IATPGRLID +E+G
Sbjct: 213 RELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQG 272
Query: 429 TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPD---RQTLMWSATWPKEVRKLAED 599
L C YLVLDEADRMLDMGFEPQIRKI+ Q P R T M+SAT+PKE++ LA+D
Sbjct: 273 FIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKD 332
Query: 600 YLXD-YVQINIGSLQLSANHNILQ-IVDVCQEHEKENKLNVLLQEIGQN 740
+L D Y+ + +G + S + NI Q ++ V + ++ N + +L+ E +N
Sbjct: 333 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEILMNEHSEN 380
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein
F01F1.7 protein.
Length = 730
Score = 162 bits (394), Expect = 5e-40
Identities = 93/235 (39%), Positives = 138/235 (58%), Gaps = 30/235 (12%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQ 278
Q ++++GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 337 QNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEE 396
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
++FG ++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY+
Sbjct: 397 ETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYV 456
Query: 459 VLDEADRMLDMGFEPQIRKIIDQIRPD--------------------------RQTLMWS 560
+LDEADRMLDMGFEP ++K+++ + PD RQT+M++
Sbjct: 457 ILDEADRMLDMGFEPDVQKVLEYM-PDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFT 515
Query: 561 ATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
AT + +LA YL ++IGS + Q+V + E K KL +L+
Sbjct: 516 ATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEVLE 569
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 159 bits (387), Expect = 4e-39
Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 9/213 (4%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 284
G++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI +
Sbjct: 227 GRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLI 286
Query: 285 SEF----GNSSY--VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 446
E G + +R GG P EQA+D+ G+ IV+ATPGRL D L K NL+
Sbjct: 287 IEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEV 346
Query: 447 CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQIN 626
C YLVLDEADRMLDMGFE +I+ I + RQTL++SAT P++++ A+ L + +N
Sbjct: 347 CRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVN 406
Query: 627 IGSLQLSANHNILQIVDVCQEHEKENKLNVLLQ 725
+G +A+ N+LQ ++ + ENKL +L+
Sbjct: 407 VGRAG-AASLNVLQELEFVR---SENKLVRVLE 435
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 157 bits (380), Expect = 3e-38
Identities = 93/226 (41%), Positives = 139/226 (61%), Gaps = 17/226 (7%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTREL 260
G++L+ AQTGSGKT A+++P + I P R+ P ALVL+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
Query: 261 AQQIQQVASEFGNSSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTN 437
+ QI + +F + + + ++GG ++Q L G I+IATPGRLID +++G
Sbjct: 263 SLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIG 322
Query: 438 LQRCTYLVLDEADRMLDMGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYL 605
++ C YLVLDEADRMLDMGFEPQIR+I++ + +R T M+SAT+PKE++ LA+D+L
Sbjct: 323 MEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFL 382
Query: 606 XD-YVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
+ YV + +G + S + NI+Q + +E EK + L LL G +
Sbjct: 383 KENYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDATGDS 427
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 136 bits (330), Expect = 3e-32
Identities = 83/214 (38%), Positives = 125/214 (58%), Gaps = 10/214 (4%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQ 278
QG +++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + V+GG +E+G I++ T GR+ F E+GT L +C +
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 496
Query: 459 VLDEADRMLD-MGFEPQIRKII--DQI--RPDRQTLMWSATWPKEVRKLAEDYLXD-YVQ 620
VLDEADRM+D MGF I I+ D + + +RQTLM+SAT+P V++ A +L + YV
Sbjct: 497 VLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVM 556
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
I I + +AN +LQ + C+ EK++KL LL
Sbjct: 557 IAIDKIG-AANKCVLQEFERCERSEKKDKLLELL 589
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 136 bits (330), Expect = 3e-32
Identities = 83/214 (38%), Positives = 125/214 (58%), Gaps = 10/214 (4%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQ 278
QG +++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + V+GG +E+G I++ T GR+ F E+GT L +C +
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 496
Query: 459 VLDEADRMLD-MGFEPQIRKII--DQI--RPDRQTLMWSATWPKEVRKLAEDYLXD-YVQ 620
VLDEADRM+D MGF I I+ D + + +RQTLM+SAT+P V++ A +L + YV
Sbjct: 497 VLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVM 556
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
I I + +AN +LQ + C+ EK++KL LL
Sbjct: 557 IAIDKIG-AANKCVLQEFERCERSEKKDKLLELL 589
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase
protein 1 protein.
Length = 763
Score = 136 bits (330), Expect = 3e-32
Identities = 83/214 (38%), Positives = 125/214 (58%), Gaps = 10/214 (4%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQ 278
QG +++ AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + V+GG +E+G I++ T GR+ F E+GT L +C +
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 496
Query: 459 VLDEADRMLD-MGFEPQIRKII--DQI--RPDRQTLMWSATWPKEVRKLAEDYLXD-YVQ 620
VLDEADRM+D MGF I I+ D + + +RQTLM+SAT+P V++ A +L + YV
Sbjct: 497 VLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVM 556
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
I I + +AN +LQ + C+ EK++KL LL
Sbjct: 557 IAIDKIG-AANKCVLQEFERCERSEKKDKLLELL 589
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 134 bits (323), Expect = 2e-31
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 10/214 (4%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQ 278
QG +++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + V+GG +E+G I++ T GR+ F E+GT L +C +
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 707
Query: 459 VLDEADRMLD-MGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYLXD-YVQ 620
VLDEADRM+D MGF I I++ + +RQTLM+SAT+P V++ A ++L + Y+
Sbjct: 708 VLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIM 767
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+ I + +AN +LQ + C EK++KL +L
Sbjct: 768 LAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEIL 800
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 134 bits (323), Expect = 2e-31
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 10/214 (4%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQ 278
QG +++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + V+GG +E+G I++ T GR+ F E+GT L +C +
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 707
Query: 459 VLDEADRMLD-MGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYLXD-YVQ 620
VLDEADRM+D MGF I I++ + +RQTLM+SAT+P V++ A ++L + Y+
Sbjct: 708 VLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIM 767
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+ I + +AN +LQ + C EK++KL +L
Sbjct: 768 LAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEIL 800
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 134 bits (323), Expect = 2e-31
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 10/214 (4%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQ 278
QG +++ AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 458
+F + + V+GG +E+G I++ T GR+ F E+GT L +C +
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFF 707
Query: 459 VLDEADRMLD-MGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYLXD-YVQ 620
VLDEADRM+D MGF I I++ + +RQTLM+SAT+P V++ A ++L + Y+
Sbjct: 708 VLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIM 767
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
+ I + +AN +LQ + C EK++KL +L
Sbjct: 768 LAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEIL 800
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 133 bits (321), Expect = 4e-31
Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 10/216 (4%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 272
+ GK+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 332 VADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
+F S + V+GG + +G I++ T GR+ F E G L +C
Sbjct: 392 YNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCR 451
Query: 453 YLVLDEADRMLD-MGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYL-XDY 614
YLVLDEADRM+D MGF P+I +II+ RQT+M+SAT+P V++ A L DY
Sbjct: 452 YLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDY 511
Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
I I + +AN ++Q ++C K +KL LL
Sbjct: 512 TMITIDKIG-AANKCVIQEFELCDRTSKVDKLLKLL 546
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 133 bits (321), Expect = 4e-31
Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 10/216 (4%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 272
+ GK+++ AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 332 VADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
Query: 273 QQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 452
+F S + V+GG + +G I++ T GR+ F E G L +C
Sbjct: 392 YNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCR 451
Query: 453 YLVLDEADRMLD-MGFEPQIRKIID----QIRPDRQTLMWSATWPKEVRKLAEDYL-XDY 614
YLVLDEADRM+D MGF P+I +II+ RQT+M+SAT+P V++ A L DY
Sbjct: 452 YLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDY 511
Query: 615 VQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLL 722
I I + +AN ++Q ++C K +KL LL
Sbjct: 512 TMITIDKIG-AANKCVIQEFELCDRTSKVDKLLKLL 546
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 126 bits (303), Expect = 5e-29
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASE 290
QGK+++G+A+TGSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 80 QGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQQFEA 134
Query: 291 FGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVL 464
G+ + + GG QA L R I++ATPGRL+D LE KG NL+ +L++
Sbjct: 135 LGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF-NLKALKFLIM 193
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADR+L+M FE ++ KI+ I +R+T ++SAT K+V KL L D ++++ S
Sbjct: 194 DEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYK 253
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQN 740
+ + N+ Q KE L LL E N
Sbjct: 254 TVD-NLKQHYIFVPNKYKETYLVYLLNEHAGN 284
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 122 bits (294), Expect = 7e-28
Identities = 69/210 (32%), Positives = 116/210 (55%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++ A+ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ E
Sbjct: 80 GQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVEL 134
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
++ GG R+ L V +VIATPGR++D +EKG ++ C LVLDEA
Sbjct: 135 SKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEA 194
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
D++L F+ + ++I+ + +RQ +++SAT+P V + ++ +IN+ ++
Sbjct: 195 DKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKPYEINL--MEELTL 252
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
+ Q QE +K + LN L +++ NQ
Sbjct: 253 LGVTQYYAFVQEKQKVHCLNTLFRKLQINQ 282
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 120 bits (290), Expect = 2e-27
Identities = 66/198 (33%), Positives = 112/198 (56%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ GK++V +++TGSGKT A+++P + + R G AL+++PTRELA Q +V
Sbjct: 58 IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVV 113
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
E G + +R C+ GG EQ + +I++ATPGRL+ + + L Y+V
Sbjct: 114 KELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVF 173
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADR+ +MGF+ Q+ + + +I RQTL++SAT PK + A+ L D + + + +
Sbjct: 174 DEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRL-DVDE 232
Query: 645 SANHNILQIVDVCQEHEK 698
+ + + +C+ EK
Sbjct: 233 KVSDKLSMVFCMCRPDEK 250
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 120 bits (290), Expect = 2e-27
Identities = 66/198 (33%), Positives = 112/198 (56%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ GK++V +++TGSGKT A+++P + + R G AL+++PTRELA Q +V
Sbjct: 58 IMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVV 113
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
E G + +R C+ GG EQ + +I++ATPGRL+ + + L Y+V
Sbjct: 114 KELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVF 173
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DEADR+ +MGF+ Q+ + + +I RQTL++SAT PK + A+ L D + + + +
Sbjct: 174 DEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRL-DVDE 232
Query: 645 SANHNILQIVDVCQEHEK 698
+ + + +C+ EK
Sbjct: 233 KVSDKLSMVFCMCRPDEK 250
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 118 bits (283), Expect = 1e-26
Identities = 64/178 (35%), Positives = 101/178 (56%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++ AQ+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V S
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSAL 120
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G V GG R+ R LE G+ +V+ TPGR+ D + + + R VLDEA
Sbjct: 121 GEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEA 180
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
D ML GF+ QI ++ + D Q ++ SAT P EV + ++ + ++I + +L+
Sbjct: 181 DEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELT 238
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 118 bits (283), Expect = 1e-26
Identities = 64/178 (35%), Positives = 101/178 (56%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK+++ AQ+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V S
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSAL 120
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G V GG R+ R LE G+ +V+ TPGR+ D + + + R VLDEA
Sbjct: 121 GEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEA 180
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLS 647
D ML GF+ QI ++ + D Q ++ SAT P EV + ++ + ++I + +L+
Sbjct: 181 DEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELT 238
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 116 bits (278), Expect = 6e-26
Identities = 62/165 (37%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
L +GK+++ A+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V
Sbjct: 102 LLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVL 160
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR-CTYLV 461
SE S + V GG+ + + L +GV I++ATPGRL+D L+ L R L+
Sbjct: 161 SELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLI 220
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAE 596
+DEADR+LD+GFE ++++++ + RQ++++SAT +V +L +
Sbjct: 221 IDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVK 265
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 108 bits (259), Expect = 1e-23
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G ++VG A+TGSGKTLA ++P + + + G AL+++PTRELA Q +
Sbjct: 113 GSDVVGAAKTGSGKTLALVIPVLEALW-RAKWSPDYGLGALIISPTRELALQTFSTINAV 171
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLDE 470
G V GG+ + R+ G+ I++ TPGRL+ + E + LVLDE
Sbjct: 172 GAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDE 230
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSA 650
ADRMLDMGF Q+ II+ + +RQTL++SAT + V+ L D V +++ +A
Sbjct: 231 ADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAA 290
Query: 651 N-HNILQIVDVCQEHEKENKL 710
N+ Q + +E K N L
Sbjct: 291 TPDNLKQSYVIVEEEHKINAL 311
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 107 bits (257), Expect = 2e-23
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +G +++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQF 177
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL----QRCT 452
+ G ++ + + GG QAR+L +V+ATPGRL D +E + ++
Sbjct: 178 TALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQ 237
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKL 590
+ VLDEADRML+ + Q++ I + I RQTL+ SAT + L
Sbjct: 238 FFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINML 283
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 107 bits (257), Expect = 2e-23
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 284
+ +G +++G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 123 ILEGSDILGCARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQF 177
Query: 285 SEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL----QRCT 452
+ G ++ + + GG QAR+L +V+ATPGRL D +E + ++
Sbjct: 178 TALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQ 237
Query: 453 YLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKL 590
+ VLDEADRML+ + Q++ I + I RQTL+ SAT + L
Sbjct: 238 FFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINML 283
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 105 bits (253), Expect = 6e-23
Identities = 58/178 (32%), Positives = 97/178 (54%)
Frame = +3
Query: 90 RXGQSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 269
R ++ + ++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRELA Q
Sbjct: 55 RAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQ 109
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRC 449
IQ+V G+ V+ GG E R L+ G +V TPGR+ D + + +
Sbjct: 110 IQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAI 169
Query: 450 TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
LVLDEAD ML+ GF+ Q+ I + P Q ++ SAT P E+ ++ ++ D ++I
Sbjct: 170 KLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI 227
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 105 bits (252), Expect = 8e-23
Identities = 57/174 (32%), Positives = 96/174 (55%)
Frame = +3
Query: 102 SLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 281
++ + ++++ AQ+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKV 113
Query: 282 ASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 461
G+ V+ GG E R L+ G +V TPGR+ D + + + LV
Sbjct: 114 VLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLV 173
Query: 462 LDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQI 623
LDEAD ML+ GF+ Q+ I + P Q ++ SAT P E+ ++ ++ D ++I
Sbjct: 174 LDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRI 227
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 95.1 bits (226), Expect = 1e-19
Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 19/246 (7%)
Frame = +3
Query: 48 IPRAAGNSARGTGSRXGQSLCQGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQPPIR 212
+ R N+ R + G +++G A+T +GKT A+ LP I I + R
Sbjct: 396 LKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKAR 455
Query: 213 RGDGPIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIA 392
+ DGP+AL+LAPTRELA QI + + ++ + +G + + ++ G +I+I
Sbjct: 456 QDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIG 515
Query: 393 TPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP--QIRKIID-----QIRPDRQT 548
T GR++DF K +L +LV DEADR+L DM +P + II + RQT
Sbjct: 516 TCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMESAATRQT 575
Query: 549 LMWSATWPKEVRKLAEDYL------XDYVQINIGSLQLSANHNILQIVDVCQEHEKENKL 710
+M SAT+ V +A + + + ++I + + +LS N L+ + EK KL
Sbjct: 576 IMTSATFNASVMTVANELMKRLPGQDEMIKIVLANGRLSKRVN-LEFFECKGLAEKNAKL 634
Query: 711 NVLLQE 728
+L++
Sbjct: 635 REILKQ 640
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 93.1 bits (221), Expect = 5e-19
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV-LAPTRELAQQIQQVASE 290
G ++V A++G GKT +++ + + P+ DG +++V + TRELA QI +
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVVCMCHTRELAFQISKEYER 131
Query: 291 FGNS-SYVRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F V+ FGG A K+++ R IV+ TPGR++ G L + Y VL
Sbjct: 132 FSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVL 191
Query: 465 DEADRML-DMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQ 641
DE D+M+ D +++I+ +Q +M+SAT PKE+R + + ++ D +++ +
Sbjct: 192 DECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEA 251
Query: 642 LSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
H + Q +E EK +L LL + NQ
Sbjct: 252 KLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQ 285
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 92.3 bits (219), Expect = 8e-19
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQ 269
+ G ++V A TGSGKTLA+++P ++ + + R P L++APTREL Q
Sbjct: 770 IMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQ 443
A + + ++ FGG + + L + I++AT GRL DF+ G +L
Sbjct: 830 TFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLS 889
Query: 444 RCTYLVLDEADRMLDMG-FEPQIRKIIDQI-RPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
+ Y+VLDEADRM+D F ++ KII +QT+++SA++ ++ L D L +V
Sbjct: 890 KMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSED---LQSDDLPKFV 946
Query: 618 QINIGSLQL----SANHNILQIVDVCQEHEKENKLNVLL 722
+ LQ+ +AN I Q + EK + + LL
Sbjct: 947 KEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLL 985
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 92.3 bits (219), Expect = 8e-19
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Frame = +3
Query: 105 LCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQ 269
+ G ++V A TGSGKTLA+++P ++ + + R P L++APTREL Q
Sbjct: 770 IMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
Query: 270 IQQVASEFGNSSYVRNTCVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQ 443
A + + ++ FGG + + L + I++AT GRL DF+ G +L
Sbjct: 830 TFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLS 889
Query: 444 RCTYLVLDEADRMLDMG-FEPQIRKIIDQI-RPDRQTLMWSATWPKEVRKLAEDYLXDYV 617
+ Y+VLDEADRM+D F ++ KII +QT+++SA++ ++ L D L +V
Sbjct: 890 KMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSED---LQSDDLPKFV 946
Query: 618 QINIGSLQL----SANHNILQIVDVCQEHEKENKLNVLL 722
+ LQ+ +AN I Q + EK + + LL
Sbjct: 947 KEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLL 985
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 91.1 bits (216), Expect = 2e-18
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 5/222 (2%)
Frame = +3
Query: 96 GQSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 275
G L ++V + TGSGKTLA++LP + I N G AL+L+P+REL QI
Sbjct: 40 GTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIV 97
Query: 276 QVASEFGNSSYVRNTCVFGGAPKREQARDLE-RGVEIVIATPGRLIDFLEKGTTNLQR-- 446
V F + V GG + + + + V I++ATPGRL ++ T + R
Sbjct: 98 SVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKM 157
Query: 447 --CTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQ 620
LV+DEADR ++ FE +R+I+ I R+T ++SAT KE L L + Q
Sbjct: 158 RTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQVKEEDDLMVFGLRNAKQ 217
Query: 621 INIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIGQNQD 746
+ + + SA + L+ V E + K +V L+ I Q D
Sbjct: 218 VKVAQERNSAAPSTLKNYYV--ECRADEKTSVCLEFIRQRTD 257
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 89.0 bits (211), Expect = 8e-18
Identities = 53/180 (29%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++ A++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKV 113
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ R + GG+ + DL++ +IVI TPGR+ ++ G N+ + VLDE
Sbjct: 114 APTG-ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDE 172
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD--YVQINIGSLQL 644
AD+++D F I II+ + RQ ++SAT+P+ + L +L D V+ N +QL
Sbjct: 173 ADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALVRFNADDVQL 232
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 89.0 bits (211), Expect = 8e-18
Identities = 53/180 (29%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
G++++ A++G+GKTL + + A+ ++++ R +++ PTRE++ QI++ +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKETVRKV 113
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 470
+ R + GG+ + DL++ +IVI TPGR+ ++ G N+ + VLDE
Sbjct: 114 APTG-ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDE 172
Query: 471 ADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD--YVQINIGSLQL 644
AD+++D F I II+ + RQ ++SAT+P+ + L +L D V+ N +QL
Sbjct: 173 ADKLMDEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRDAALVRFNADDVQL 232
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 88.6 bits (210), Expect = 1e-17
Identities = 69/197 (35%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK++ A TG+GKT A++LP + + +P + LVL PTRELA Q+ QV +
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKL 242
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG-------------TT 434
+ GG + Q L G ++V+ATPGRLID L T
Sbjct: 243 STFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTP 302
Query: 435 NL-------QRC-----TYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKE 578
N+ + C LVLDEADRML+ F Q+ ++I +RQTL++SAT +E
Sbjct: 303 NIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEE 362
Query: 579 VRKLAEDYLXDYVQINI 629
+ +LA L V+I I
Sbjct: 363 IDELASMSLQKPVKIFI 379
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 88.2 bits (209), Expect = 1e-17
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Frame = +3
Query: 111 QGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAS 287
+ KN++G A+TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 125 ENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFV 184
Query: 288 EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 467
+ + + E + LE +V+ TPG+L+ +YLV+D
Sbjct: 185 KLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMD 244
Query: 468 EADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLX-DYVQINIGSLQL 644
EAD +L G+E ++ KI ++ P Q LM SAT ++ L + ++ + I + L
Sbjct: 245 EADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDL 304
Query: 645 SANHNILQIVDVCQEHEK 698
+ + Q C E+
Sbjct: 305 PNSDQLTQYQLTCGSDEE 322
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 87.4 bits (207), Expect = 2e-17
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 3/213 (1%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV-LAPTRELAQQIQQVASE 290
G ++V A++G GKT +++ + + P+ DG +++V + TRELA QI +
Sbjct: 77 GMDVVCQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVVCMCHTRELAFQISKEYER 130
Query: 291 FGNS-SYVRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F V+ FGG A K+++ R IV+ TPGR++ G L + Y VL
Sbjct: 131 FSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVL 190
Query: 465 DEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQL 644
DE D+M+ + +R+ + +I +Q +M+SAT PKE+R + + ++ D +++ +
Sbjct: 191 DECDKMIG---DADMRRDVQEI---KQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAK 244
Query: 645 SANHNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
H + Q +E EK +L LL + NQ
Sbjct: 245 LTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQ 277
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 83.4 bits (197), Expect = 4e-16
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV-LAPTRELAQQIQQVASE 290
G ++V A++G GKT +++ + + P+ DG +++V + TRELA QI +
Sbjct: 78 GMDVVCQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVVCMCHTRELAFQISKEYER 131
Query: 291 FGNS-SYVRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 464
F V+ FGG A K+++ R IV+ TPGR++ G L + Y VL
Sbjct: 132 FSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVL 191
Query: 465 DEADRML-DMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXD 611
DE D+M+ D +++I+ +Q +M+SAT PKE+R + + ++ D
Sbjct: 192 DECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQD 241
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 79.8 bits (188), Expect = 5e-15
Identities = 62/224 (27%), Positives = 122/224 (54%), Gaps = 18/224 (8%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTT-----NL 440
+ +++ + T + GG + +Q R + ++ +IV+ATPGRL +++ T
Sbjct: 87 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEW 146
Query: 441 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDR-----QTLMWSATWP-KEVRKLAEDY 602
+ LV+DE DRM++ G+ ++ I+++I + QTL++SAT + + +AE+
Sbjct: 147 KDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSATLTFAKAQDVAEEE 206
Query: 603 LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
+ +LS+ I +++ + E ++K+ L +++G
Sbjct: 207 KKK-------AKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMG 243
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 79.8 bits (188), Expect = 5e-15
Identities = 62/224 (27%), Positives = 122/224 (54%), Gaps = 18/224 (8%)
Frame = +3
Query: 117 KNLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
++++G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTT-----NL 440
+ +++ + T + GG + +Q R + ++ +IV+ATPGRL +++ T
Sbjct: 254 HINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEW 313
Query: 441 QRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDR-----QTLMWSATWP-KEVRKLAEDY 602
+ LV+DE DRM++ G+ ++ I+++I + QTL++SAT + + +AE+
Sbjct: 314 KDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQTLVFSATLTFAKAQDVAEEE 373
Query: 603 LXDYVQINIGSLQLSANHNILQIVDVCQEHEKENKLNVLLQEIG 734
+ +LS+ I +++ + E ++K+ L +++G
Sbjct: 374 KKK-------AKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMG 410
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 69.3 bits (162), Expect = 7e-12
Identities = 55/210 (26%), Positives = 101/210 (48%)
Frame = +3
Query: 114 GKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEF 293
GK++ +Q GSGKT+ ++ + I+ + + ++LAP R +AQ+ +
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQRAHEQLKSL 87
Query: 294 GNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 473
G + V TC+ + + ++ +++ TP DFL ++ R VLDEA
Sbjct: 88 GRNLNVNATCL-----GFDTTAENDKISHVLMGTPK---DFLSNIPSDTSRIKMFVLDEA 139
Query: 474 DRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSAN 653
D ML GF+ QI ++ + D Q ++ SAT P EV + ++ D ++I + +L+
Sbjct: 140 DEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRDPIRILVKKDELTLE 199
Query: 654 HNILQIVDVCQEHEKENKLNVLLQEIGQNQ 743
++V ++ K N L LL+ + Q
Sbjct: 200 GIRQFYINVQKDEWKFNCLCDLLKTSRETQ 229
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 66.1 bits (154), Expect = 6e-11
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Frame = +3
Query: 174 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPK 344
P + ++ +P + DG P A+++APT+EL QI ++ + + +
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINE 136
Query: 345 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIID 524
E + LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI
Sbjct: 137 EENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRS 196
Query: 525 QIRPDRQTLMWSATWPKEVRKLAEDYLX-DYVQINIGSLQLSANHNILQIVDVCQEHEK 698
++ P Q LM SAT ++ L + ++ + I + L + + Q C E+
Sbjct: 197 KLPPTYQCLMTSATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGSDEE 255
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 65.3 bits (152), Expect = 1e-10
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 15/232 (6%)
Frame = +3
Query: 33 LXTSGIPRAAGNSARGTGSRXGQSL---CQGKNLVGVAQTGSGKTLAYILPA---IVHIN 194
+ S + R + NS R QS+ + +N++ A TGSGKTLA+ LP I+ +
Sbjct: 133 MSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELK 192
Query: 195 NQPPIRRGDGP--IALVLAPTRELAQQIQQVASEFGNSSYVRNTCVFGGAPKREQARDLE 368
+ + +A+VL PTRELA Q +EF Y NT + E+ D++
Sbjct: 193 QRADYSSSNSSKLLAVVLEPTRELA---AQTYTEF--LKYCANTSISAANFSGEET-DIQ 246
Query: 369 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML------DMGFEPQIRKIIDQI 530
+I+++TP R++ L+K T+ R +LV+DE+DR+ D F Q+ I
Sbjct: 247 H-ADILVSTPNRIVFHLDKIDTSSLR--WLVVDESDRLFEVVEGQDKCFRNQLAAIYKAC 303
Query: 531 RPD-RQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVC 683
+ +SAT+ EV K ++ + + + +G + S+N ++ Q + C
Sbjct: 304 DAKCTRVAFFSATFSHEVEKWCKENIDEIGMVCVGE-RNSSNTSVKQKLTYC 354
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 64.5 bits (150), Expect = 2e-10
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Frame = +3
Query: 120 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGN 299
NL+ AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V + G
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGK 304
Query: 300 --SSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDE 470
+ + + GG + R L +IVI TPG D+L+K + + LVLDE
Sbjct: 305 FIDNLKIHYAIKGGNMAAMRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDE 362
Query: 471 ADRML-DMGF---EPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
AD M+ GF I +++ Q++++SAT+ + V A + + + + +
Sbjct: 363 ADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAIVVML-KR 421
Query: 639 QLSANHNILQIVDVC 683
+ A NI Q C
Sbjct: 422 EEQALPNIKQFYVQC 436
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 64.5 bits (150), Expect = 2e-10
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Frame = +3
Query: 120 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGN 299
NL+ AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V + G
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGK 329
Query: 300 --SSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDE 470
+ + + GG + R L +IVI TPG D+L+K + + LVLDE
Sbjct: 330 FIDNLKIHYAIKGGNMAAMRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDE 387
Query: 471 ADRML-DMGF---EPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
AD M+ GF I +++ Q++++SAT+ + V A + + + + +
Sbjct: 388 ADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAIVVML-KR 446
Query: 639 QLSANHNILQIVDVC 683
+ A NI Q C
Sbjct: 447 EEQALPNIKQFYVQC 461
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 64.5 bits (150), Expect = 2e-10
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Frame = +3
Query: 120 NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGN 299
NL+ AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V + G
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGK 713
Query: 300 --SSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDE 470
+ + + GG + R L +IVI TPG D+L+K + + LVLDE
Sbjct: 714 FIDNLKIHYAIKGGNMAAMRGRKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDE 771
Query: 471 ADRML-DMGF---EPQIRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSL 638
AD M+ GF I +++ Q++++SAT+ + V A + + + + +
Sbjct: 772 ADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAIVVML-KR 830
Query: 639 QLSANHNILQIVDVC 683
+ A NI Q C
Sbjct: 831 EEQALPNIKQFYVQC 845
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 57.6 bits (133), Expect = 2e-08
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Frame = +3
Query: 135 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASEFGNSSYVR 314
A TGSGKT+ Y+LP + + ++P A++L P + L QI + + S V
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVA 218
Query: 315 NTCVFGGAPKRE-QARDLERG-VEIVIATPGRLIDFLEK---GTTNLQRCTYLVLDEADR 479
GA E +AR L +++ATP RL+ L +L + +L++DEADR
Sbjct: 219 KVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADR 278
Query: 480 M 482
M
Sbjct: 279 M 279
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 56.4 bits (130), Expect = 5e-08
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +3
Query: 225 PIALVLAPTRELAQQIQQVASEFGN---SSYVRNTCVFGGAPKREQARDLERGVEIVIAT 395
P+ ++L PTREL QQ Q F + S +R + G + R LE G +IV+ T
Sbjct: 282 PLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Query: 396 PGRLIDFLEKGTTNLQRCTYLVLDEADRML 485
P R+ D + G + ++V+DE D+ L
Sbjct: 342 PSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 30.7 bits (66), Expect = 2.8
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 755 KTIIFVETKRKAXXXXXXXXXYGWPAVCMHXDKHSKKGMKXFXNFKEGRFQY-TCSN 922
K I+F TK++ A C+H D+ +++ FK+G ++ CS+
Sbjct: 507 KAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSD 563
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 52.4 bits (120), Expect = 8e-07
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQ 266
Q + +G+ LV A TG GKT A+++PAI N Q P L++A T L
Sbjct: 25 QVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMASTSALVD 84
Query: 267 QIQQVASEFGNSSYVRNT-CVFGGAPKREQARD-------LERG-VEIVIATPGRLIDFL 419
Q+ F + C+ P R+ D +G +I T G+L +
Sbjct: 85 QL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLKATI 138
Query: 420 EKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIDQIRPDR----QTLMWSATWPK 575
E G L ++LDEAD+M+D F P I I+DQ++ + Q+ +SAT+ K
Sbjct: 139 ECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENLQSCFFSATYNK 195
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 51.6 bits (118), Expect = 1e-06
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRR--GDGPIALVLAPTRELAQ 266
Q + +G+ LV A TG GKT A+++PAI N Q P L++A T L
Sbjct: 125 QVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMASTSALVD 184
Query: 267 QIQQVASEFGNSSYVRNT-CVFGGAPKREQARD-------LERG-VEIVIATPGRLIDFL 419
Q+ F + C+ P R+ D +G +I T G+L +
Sbjct: 185 QL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLKATI 238
Query: 420 EKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIDQIRPDR----QTLMWSATWPK 575
E G L ++LDEAD+M+D F P I I+DQ++ + Q+ +SAT+ K
Sbjct: 239 ECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLENLQSCFFSATYNK 295
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 46.0 bits (104), Expect = 7e-05
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQ 266
Q++ + L+ A TG GKT A+++PAI + + +P I P L+LA T L +
Sbjct: 124 QAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVE 183
Query: 267 QIQQVAS------EFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 428
Q+ + + +R+ + + +D +I T G+L +E
Sbjct: 184 QLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQ---CDIAFCTMGKLKASIEDK 240
Query: 429 TTNLQRCTYLVLDEADRMLDMG-FEPQIRKIIDQIRPD 539
T L ++LDE+D+M+D+ F I ++DQ++ D
Sbjct: 241 TILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQED 278
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 37.5 bits (83), Expect = 0.024
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
Q +GKN V VA TGSGKT I A+ HI + +G ++L P L Q +
Sbjct: 380 QPALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQQKD 437
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTN 437
++ N Y N F G+ RD + + TP LI+ L+ N
Sbjct: 438 RFLKYCNGMYEVNG--FHGSESSVSGTGRRDEVIATHVSVMTPQILINMLQSVRQN 491
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 36.7 bits (81), Expect = 0.042
Identities = 30/114 (26%), Positives = 53/114 (46%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
Q QGKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 302 QVALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQ 357
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 440
AS +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 358 AASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 36.7 bits (81), Expect = 0.042
Identities = 30/114 (26%), Positives = 53/114 (46%)
Frame = +3
Query: 99 QSLCQGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 278
Q QGKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 302 QVALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQ 357
Query: 279 VASEFGNSSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 440
AS +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 358 AASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 507 IRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQ 686
+ ++IDQ P+ +T++ A + K V + ++ + GS+QL A+H Q +VCQ
Sbjct: 221 VNRMIDQATPETRTVIEKAFF-KNVLRFGRG---SFICCD-GSIQLGADHVPEQWENVCQ 275
Query: 687 EHEKENKLNVLLQE 728
E++ + LL+E
Sbjct: 276 EYQIRKRQIPLLKE 289
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 31.5 bits (68), Expect = 1.6
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 507 IRKIIDQIRPDRQTLMWSATWPKEVRKLAEDYLXDYVQINIGSLQLSANHNILQIVDVCQ 686
+ ++IDQ P+ +T++ A + K V + ++ + GS+QL A+H Q +VCQ
Sbjct: 236 VNRMIDQATPETRTVIEKAFF-KNVLRFGRG---SFICCD-GSIQLGADHVPEQWENVCQ 290
Query: 687 EHEKENKLNVLLQE 728
E++ + LL+E
Sbjct: 291 EYQIRKRQIPLLKE 304
>Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical
protein C38D9.8 protein.
Length = 344
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +3
Query: 414 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
FLE+ + C YL+++E LD ++ Q ++++ I ++ ++ W +
Sbjct: 113 FLEQEEKMPRSCEYLIINEFSTGLDEFWQHQKDELVETISVEKGIVLSGEAWSSSDKIYN 172
Query: 594 EDYLXDYVQINIGSLQLSANHNILQIVD--VCQEHEKENKLNVLLQEIGQ 737
DYL N+ L +N + +D H N L VL + Q
Sbjct: 173 VDYLFVGHSGNMALTDLLRFNNRIVFLDRVSISNHTIRNFLQVLKKSNSQ 222
>Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical
protein F31E9.4 protein.
Length = 344
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 414 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVRKLA 593
FLE+ + C YL+++E LD ++ Q ++++ I ++ ++ W +
Sbjct: 113 FLEQEEKMPRSCEYLIINEISTGLDEFWQHQKDELVESISVEKGIVLSGEAWSNSDKIYN 172
Query: 594 EDYL 605
DYL
Sbjct: 173 VDYL 176
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 141 TGSGKTLAYILPAIVH 188
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,188,654
Number of Sequences: 27780
Number of extensions: 636795
Number of successful extensions: 1612
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4297958014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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