Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_B06_e42_04.seq
(1469 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 257 9e-68
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 257 9e-68
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 257 9e-68
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 257 9e-68
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 257 9e-68
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 257 9e-68
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-18
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 6.1
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 257 bits (629), Expect = 9e-68
Identities = 123/159 (77%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +2
Query: 122 NSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 298
NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHV
Sbjct: 33 NSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHV 92
Query: 299 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQ 478
VF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+
Sbjct: 93 VFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSR 152
Query: 479 LIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 595
LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 153 LIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 257 bits (629), Expect = 9e-68
Identities = 123/159 (77%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +2
Query: 122 NSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 298
NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHV
Sbjct: 31 NSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHV 90
Query: 299 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQ 478
VF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+
Sbjct: 91 VFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSR 150
Query: 479 LIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 595
LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 151 LIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 257 bits (629), Expect = 9e-68
Identities = 123/159 (77%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +2
Query: 122 NSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 298
NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHV
Sbjct: 33 NSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHV 92
Query: 299 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQ 478
VF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+
Sbjct: 93 VFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSR 152
Query: 479 LIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 595
LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 153 LIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 257 bits (629), Expect = 9e-68
Identities = 123/159 (77%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +2
Query: 122 NSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 298
NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHV
Sbjct: 33 NSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHV 92
Query: 299 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQ 478
VF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+
Sbjct: 93 VFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSR 152
Query: 479 LIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 595
LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 153 LIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 257 bits (629), Expect = 9e-68
Identities = 123/159 (77%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +2
Query: 122 NSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 298
NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHV
Sbjct: 33 NSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHV 92
Query: 299 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQ 478
VF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+
Sbjct: 93 VFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSR 152
Query: 479 LIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 595
LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 153 LIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 257 bits (629), Expect = 9e-68
Identities = 123/159 (77%), Positives = 143/159 (89%), Gaps = 1/159 (0%)
Frame = +2
Query: 122 NSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHV 298
NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHV
Sbjct: 33 NSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHV 92
Query: 299 VFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQ 478
VF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+
Sbjct: 93 VFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSR 152
Query: 479 LIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 595
LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 153 LIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 377 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 532
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.9 bits (69), Expect = 6.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 549 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISAGNTRSSNMASYTEVSVLERG 370
T W ++ LCS++ W L CT + P L+ L T+S+ +S A +L++
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 322
Query: 369 L 367
L
Sbjct: 323 L 323
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,100,899
Number of Sequences: 237096
Number of extensions: 3719190
Number of successful extensions: 6052
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6035
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21704417064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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