Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B04_e26_04.seq
         (1509 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce...    52   2e-07
SPAC11E3.09 |pyp3||protein-tyrosine phosphatase Pyp3|Schizosacch...    46   2e-05
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces...    46   2e-05
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos...    28   2.9  
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc...    27   8.9  
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F...    27   8.9  

>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 550

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
 Frame = +1

Query: 103 VVHCSAGVGRSGTFITLDTALH----RLAAH----ADTLD-VFGMVYAMRRERVWMVQTE 255
           +VHCSAGVGR+GTFI LDT L     +L+      AD+ D VF +V  +R++R+ MVQT 
Sbjct: 467 IVHCSAGVGRTGTFIVLDTILRFPESKLSGFNPSVADSSDVVFQLVDHIRKQRMKMVQTF 526

Query: 256 QQYICVHQCLVAVLEGQ 306
            Q+  V+  + ++ + Q
Sbjct: 527 TQFKYVYDLIDSLQKSQ 543


>SPAC11E3.09 |pyp3||protein-tyrosine phosphatase
           Pyp3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 303

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
 Frame = +1

Query: 97  PVVVHCSAGVGRSGTFITLDTALHRLAAHADTL-----DVFGMVYAMRRERVWMVQTEQQ 261
           P++VHCSAG GR+GTF+ L   L +      T      ++  +V ++R +R+  VQ+  Q
Sbjct: 222 PIIVHCSAGCGRTGTFMALFEILSQTDDSTSTSKFEVDNIANIVSSLRSQRMQSVQSVDQ 281

Query: 262 YICVHQCLVAVLEGQDLAPP 321
            + ++     +L+G++   P
Sbjct: 282 LVFLYTVSQELLQGKEFLLP 301


>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 711

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
 Frame = +1

Query: 97  PVVVHCSAGVGRSGTFITLDTALH-------RLAAHADTLD-VFGMVYAMRRERVWMVQT 252
           P+ VHCSAGVGR+GTFI +D  L        +     D+ D +F  V ++R +R+ MVQ 
Sbjct: 625 PMFVHCSAGVGRTGTFIAVDQILQVPKNILPKTTNLEDSKDFIFNCVNSLRSQRMKMVQN 684

Query: 253 EQQY 264
            +Q+
Sbjct: 685 FEQF 688


>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
           5-trisphosphate3-phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 348

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 100 VVVHCSAGVGRSGTFI 147
           +VVHC AG GR+GT I
Sbjct: 125 LVVHCKAGKGRTGTVI 140


>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
           Ade2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 434

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 564 GNGPMVDCILDNVVQSARAEGG 629
           G G +VD + DNV   AR +GG
Sbjct: 28  GKGKLVDILCDNVDVCARCQGG 49


>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
           Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 537

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 100 VVVHCSAGVGRSGTFI 147
           + VHC AG+GR+G  I
Sbjct: 282 IAVHCKAGLGRTGCLI 297


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,514,065
Number of Sequences: 5004
Number of extensions: 32988
Number of successful extensions: 81
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 844406124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)