Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B02_e10_04.seq
         (1509 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_33138| Best HMM Match : Mov34 (HMM E-Value=0)                      289   3e-78
SB_33626| Best HMM Match : Mov34 (HMM E-Value=0.71)                    38   0.021
SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)                 37   0.048
SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.20 
SB_45334| Best HMM Match : Mov34 (HMM E-Value=0.0076)                  31   2.4  
SB_41612| Best HMM Match : OstA (HMM E-Value=5.2)                      29   9.7  
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)         29   9.7  

>SB_33138| Best HMM Match : Mov34 (HMM E-Value=0)
          Length = 195

 Score =  289 bits (710), Expect = 3e-78
 Identities = 130/164 (79%), Positives = 150/164 (91%)
 Frame = +2

Query: 233 SNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALALLKM 412
           S +A K+W +ANN+E V+ +D+I++YD++QQQ+IL AKPW+KDPH+FK+IKISALALLKM
Sbjct: 3   SAMAMKSWELANNIENVNGIDEIFKYDRQQQQEILQAKPWQKDPHYFKNIKISALALLKM 62

Query: 413 VMHARSGGTLEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAK 592
           VMHARSGG LEVMGL+LGKVD +TMIVMD+FALPVEGTETRVNAQA AYEYM AYIE+AK
Sbjct: 63  VMHARSGGNLEVMGLMLGKVDGDTMIVMDAFALPVEGTETRVNAQAAAYEYMAAYIESAK 122

Query: 593 QVGRHENAIGWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIV 724
            VGR ENAIGWYHSHPGYGCWLSGIDV TQM+NQ FQEPFVAIV
Sbjct: 123 SVGRLENAIGWYHSHPGYGCWLSGIDVGTQMVNQQFQEPFVAIV 166


>SB_33626| Best HMM Match : Mov34 (HMM E-Value=0.71)
          Length = 95

 Score = 37.9 bits (84), Expect = 0.021
 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = +2

Query: 425 RSGGTLEVMGLLLGK-VDANTMIVMDSFALPVEGTETR 535
           R+G  +EVMGL+LG+ VD  T+ V+D FA+P  GT  R
Sbjct: 2   RAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTVCR 39


>SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)
          Length = 431

 Score = 36.7 bits (81), Expect = 0.048
 Identities = 24/98 (24%), Positives = 42/98 (42%)
 Frame = +2

Query: 440 LEVMGLLLGKVDANTMIVMDSFALPVEGTETRVNAQAQAYEYMTAYIEAAKQVGRHENAI 619
           +E  G+L G +  N   +     +P + T T  +    + E M  Y ++   +      +
Sbjct: 284 METCGILTGSLQQNQFCITH-LVIPKQ-TSTTDSCTTLSEEDMFEYQDSHNLI-----TL 336

Query: 620 GWYHSHPGYGCWLSGIDVSTQMLNQNFQEPFVAIVIDP 733
           GW H+HP    ++S +D+ T    Q      +AIV  P
Sbjct: 337 GWIHTHPTQTAFMSSVDLHTHCSYQLMMPEAIAIVCSP 374


>SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 465

 Score = 34.7 bits (76), Expect = 0.20
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
 Frame = +2

Query: 617 IGWYHSHPGYGCWLSGIDVSTQMLNQNF--------QEPFVAIVIDPVRT 742
           +GWYHSHP Y    S  D+ +Q+  Q+         QEP + ++I P  T
Sbjct: 4   VGWYHSHPSYQADPSVQDIKSQLRYQHALQQGLSGPQEPCLGLIISPYDT 53


>SB_45334| Best HMM Match : Mov34 (HMM E-Value=0.0076)
          Length = 174

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 617 IGWYHSHPGYGCWLSGIDVSTQMLNQNF 700
           +GWYHSHP +    S  D+ TQ   Q F
Sbjct: 58  VGWYHSHPTFAPNPSVRDIETQAKFQQF 85


>SB_41612| Best HMM Match : OstA (HMM E-Value=5.2)
          Length = 442

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = -3

Query: 565 IFVSLSLCIDTSFSTFYRESKRVHNNHSVCVNFTQEQSHN 446
           I+ S ++C+ T+    +  ++ VH +H++C++ T  Q  N
Sbjct: 132 IYPSDNICVHTNNQGIHTNNQSVHTSHNICIH-TNNQGLN 170


>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
          Length = 1692

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 290  VDDIYRYDKKQQQDILAAKPWEKDPHFFKDIKISALALLKMVMH 421
            + D  +YD+ +QQ I  + PW  DP    D    ALA LK   H
Sbjct: 913  IQDNLQYDENKQQWI-TSYPWLTDPTTLPDNYDIALATLKKTEH 955


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,072,123
Number of Sequences: 59808
Number of extensions: 621591
Number of successful extensions: 1518
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4894653009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)