BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_B02_e10_04.seq
(1509 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 27 1.4
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 26 3.3
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 27.1 bits (57), Expect = 1.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 735 TGSMTIATNGSWKF*LSICVETSIPESQH 649
TG++T NG+W F S C ETS H
Sbjct: 459 TGNVTDVVNGTWDF--SACEETSCAYGLH 485
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 25.8 bits (54), Expect = 3.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 197 NSTMASTSADSQSNIAQKTWVMANNMEIVSNVDDIYRYDKKQQQDILAAKPWEK 358
N + +ST QS A +N +++N+D+IY+++ + + WE+
Sbjct: 669 NQSSSSTPNAEQSPSASSKDTFSNEY-VLTNLDEIYKFEIENDDMLSIQDYWEQ 721
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,159,969
Number of Sequences: 2352
Number of extensions: 22090
Number of successful extensions: 45
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 176781825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -