Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B02_e10_04.seq
         (1509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   1.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   1.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   9.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 344 KPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLL 463
           KP+ KD   + ++KI +  + K++ +     T    GLLL
Sbjct: 437 KPYNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 344 KPWEKDPHFFKDIKISALALLKMVMHARSGGTLEVMGLLL 463
           KP+ KD   + ++KI +  + K++ +     T    GLLL
Sbjct: 437 KPYNKDEIIYPNLKIESFTVDKLITYFEQFDTTINNGLLL 476


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 14/57 (24%), Positives = 22/57 (38%)
 Frame = -3

Query: 814 SSLAGFVTXGYVLXAPRQTFPAEXSSDRVNDNSHKWFLEILIKHLCRDIYTRKPTSV 644
           SS+ G       L    Q  P   S +R   + H+W + +     CR  +  + T V
Sbjct: 477 SSIGGITRDISSLVVQEQPTPTTESEERRFFSFHQWGILVYEPSACRPRHEIRSTDV 533


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,857
Number of Sequences: 438
Number of extensions: 5858
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52754625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)