Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B01_e2_03.seq
         (1560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    29   0.36 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   3.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   5.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 0.36
 Identities = 15/48 (31%), Positives = 15/48 (31%)
 Frame = -2

Query: 1247 FXXXAXPXPPXXPGGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGGXS 1104
            F     P      GG G GG      G   G   G G   G   GG S
Sbjct: 827  FLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGGGSS 874


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
 Frame = +1

Query: 1066 GXPGXXKXXXTEPEXPPARXPXXXPGPLXGPXG-----GPXPRAXXPPXPXPPGXXGGXG 1230
            G PG        P+ PP R     P    GP G     G    A  P  P  PG  G  G
Sbjct: 696  GAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPGEMGLRG 755


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.5
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = -2

Query: 1220 PXXPGGXGXGGXXARGXGPPXGPXRGPGXXXGXR 1119
            P   GG   GG    G G   GP  G G   G R
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGR 233



 Score = 25.8 bits (54), Expect = 3.4
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -2

Query: 1208 GGXGXGGXXARGXGPPXGPXRGPGXXXGXRAGG 1110
            GG G GG    G G   G   GPG   G   GG
Sbjct: 203  GGGGSGGGAPGGGGGSSG---GPGPGGGGGGGG 232


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
            chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +1

Query: 1102 PEXPPARXPXXXPGPLXGPXGGPXPRAXXPPXPXPPGXXGGXG 1230
            P+  P R        + GP G P      P  P P G  G  G
Sbjct: 381  PKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEG 423


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
 Frame = +1

Query: 1138 PGPLXGPXGGPX-PRAXXPPXPXPPGXXG 1221
            P  L  P G P  P A  PP P PP   G
Sbjct: 564  PAQLRFPAGFPNLPNAQPPPAPPPPPPMG 592


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = -2

Query: 377 YVLCITLCILIHDYSCRFLVDWISKC---NLVVPKT 279
           ++LC  LC +   ++C+  +   S     NL VP T
Sbjct: 38  HILCAYLCYIFSKFACKIQIQSFSMAFPINLAVPVT 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,193,481
Number of Sequences: 2352
Number of extensions: 20907
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 183690540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)