Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_A12_e89_02.seq
         (1445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   1.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   1.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   3.7  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   8.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 538 NDQIPCIRCRSPNRILNQILVS 473
           +DQI   RCR+ +R+  Q++VS
Sbjct: 201 SDQIHGYRCRTMHRLTRQVVVS 222


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 538 NDQIPCIRCRSPNRILNQILVS 473
           +DQI   RCR+ +R+  Q++VS
Sbjct: 201 SDQIHGYRCRTMHRLTRQVVVS 222


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 404 PNEPPRPSGDATANTTAAPKPIAGNENLIQ 493
           PN  P P+    + TT   +   G++ L+Q
Sbjct: 741 PNASPSPAEQCASTTTITARSPQGSQGLLQ 770


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 706 WEEQWGAIDPYNFVTVEQYFRRH 774
           + + W ++ PY  ++VE   R H
Sbjct: 151 FRQNWASLQPYKKLSVEVVRREH 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,564
Number of Sequences: 438
Number of extensions: 6437
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 50242500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)