Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_A08_e57_02.seq
(1430 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 129 3e-29
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 129 3e-29
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 129 3e-29
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 129 3e-29
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 129 3e-29
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 129 3e-29
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 118 7e-26
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 51 9e-06
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 129 bits (311), Expect = 3e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 31 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 90
Query: 217 DEDSAHKLFTLVTYVPVASIKGLQTENVD 303
DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 91 DEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 129 bits (311), Expect = 3e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 35 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 94
Query: 217 DEDSAHKLFTLVTYVPVASIKGLQTENVD 303
DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 95 DEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 129 bits (311), Expect = 3e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 35 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 94
Query: 217 DEDSAHKLFTLVTYVPVASIKGLQTENVD 303
DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 95 DEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 129 bits (311), Expect = 3e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 35 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 94
Query: 217 DEDSAHKLFTLVTYVPVASIKGLQTENVD 303
DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 95 DEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 129 bits (311), Expect = 3e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 35 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 94
Query: 217 DEDSAHKLFTLVTYVPVASIKGLQTENVD 303
DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 95 DEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 129 bits (311), Expect = 3e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 35 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 94
Query: 217 DEDSAHKLFTLVTYVPVASIKGLQTENVD 303
DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 95 DEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 118 bits (283), Expect = 7e-26
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = +1
Query: 37 GVGFKKRAPRAIKEIRRFAEKXMGTPDVRVDTRLNKYLWSKGVRNVPFXXXXXXXXXXKX 216
GVGFKKRAPRA+KEIR+FA K MGTPDVR+DTRLNK +W+KG+RNVP+
Sbjct: 35 GVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNE 94
Query: 217 DEDSAHKLFTLVTYVPVASIK 279
DEDS +KL+TLVTYVPV + K
Sbjct: 95 DEDSPNKLYTLVTYVPVTTFK 115
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 51.2 bits (117), Expect = 9e-06
Identities = 24/45 (53%), Positives = 28/45 (62%)
Frame = +1
Query: 169 NVPFXXXXXXXXXXKXDEDSAHKLFTLVTYVPVASIKGLQTENVD 303
NVP+ DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,652,538
Number of Sequences: 237096
Number of extensions: 2635883
Number of successful extensions: 8693
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8693
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20991898322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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