Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_A07_e49_01.seq
         (1453 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   2.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   2.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   3.1  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect(2) = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 110 RTVKNSLKQGAKVSICDIDSDVGE 181
           R  +N+L+Q    SIC ID D  +
Sbjct: 125 RIEQNTLEQTVLQSICSIDGDFND 148



 Score = 20.6 bits (41), Expect(2) = 2.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 8   VRRCIL*DLTNIYLKW 55
           V  C +  ++N+Y+KW
Sbjct: 71  VTACSIYFISNVYIKW 86


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect(2) = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 110 RTVKNSLKQGAKVSICDIDSDVGE 181
           R  +N+L+Q    SIC ID D  +
Sbjct: 125 RIEQNTLEQTVLQSICSIDGDFND 148



 Score = 20.6 bits (41), Expect(2) = 2.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 8   VRRCIL*DLTNIYLKW 55
           V  C +  ++N+Y+KW
Sbjct: 71  VTACSIYFISNVYIKW 86


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 398 SPSVSIHGKGPRXSWRYHREHCFHSIRKASSLD 496
           SP  +IHG G R +    R +   SI   +SLD
Sbjct: 880 SPPAAIHGGGSRTTTVLKRTYSNSSINSLNSLD 912


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,587
Number of Sequences: 2352
Number of extensions: 13427
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 169060320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)