Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_A06_e41_02.seq
         (1493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    26   2.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   4.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   4.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   7.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   7.4  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -3

Query: 417 FHCNMXIYIYIWXVIDGASRTLXXNLFDYPSYFFNKIYHLSFC 289
           FH    +YIY        S  L   LF   +Y    +Y+LS C
Sbjct: 284 FHAQRLVYIYGVNTNHQPSDPLILKLFIITTYISGILYYLSTC 326


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +3

Query: 522 NRXAWSWGSHGXXGQXXAXXXGXPPAGNXC 611
           N      GSHG  G   A     PP G+ C
Sbjct: 349 NEGGTGCGSHGCCGGASATPHNMPPLGSLC 378


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = +3

Query: 522 NRXAWSWGSHGXXGQXXAXXXGXPPAGNXC 611
           N      GSHG  G   A     PP G+ C
Sbjct: 349 NEGGTGCGSHGCCGGASATPHNMPPLGSLC 378


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 7.4
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -3

Query: 834 RTPGXMXPRAPXGPXXXGGPPGG 766
           RTP    P+ P  P    GP  G
Sbjct: 364 RTPSGTEPKTPTSPTGPSGPGSG 386


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 7.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 770 PGGPPXXXGPXGARGXXXPGVRG 838
           P GPP   GP G +G   PG+ G
Sbjct: 717 PPGPPGFNGPKGDKG--LPGLAG 737


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,213
Number of Sequences: 2352
Number of extensions: 13008
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 174749850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)