Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_A06_e41_02.seq
(1493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 34 1.2
Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for ... 34 1.2
V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA enco... 34 1.2
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 34 1.2
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 34 1.2
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 34 1.2
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 34 1.2
AC002074-1|AAS02025.1| 162|Homo sapiens unknown protein. 34 1.2
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 33 2.7
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 33 2.7
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 33 2.7
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 33 2.7
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 33 2.7
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 33 2.7
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 33 2.7
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 33 2.7
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 33 2.7
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 33 2.7
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 33 2.7
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 33 2.7
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 33 2.7
BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2... 33 3.6
BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2... 33 3.6
AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein p... 33 3.6
L47668-1|AAB59577.1| 84|Homo sapiens alpha-2 collagen type I p... 32 4.7
BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein. 32 4.7
AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein. 32 4.7
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 32 4.7
AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein. 32 4.7
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 739
>Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for
prepro-alpha2(I) collagen (COL1A2). ).
Length = 765
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 739
>V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA
encoding Pro-alpha-2 chain of type I procollagen. (major
part). ).
Length = 740
Score = 34.3 bits (75), Expect = 1.2
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = -3
Query: 828 PGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQAXGX 649
PG P GP GPPG +RG R P P VG P A
Sbjct: 167 PGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPR--GDQGPAGRPGEVGAPGPPGFAGEK 224
Query: 648 GSPADXXXXXPEGRXSPQ 595
G + P G PQ
Sbjct: 225 GPSGEAGTAGPPGTPGPQ 242
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 60 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 117
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 739
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 739
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 739
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 739
>AC002074-1|AAS02025.1| 162|Homo sapiens unknown protein.
Length = 162
Score = 34.3 bits (75), Expect = 1.2
Identities = 29/104 (27%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = -3
Query: 885 RXXPARDXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPG----GIXXXXXTDVRGARL-- 724
R PA D P P PG P GP GPPG G D +G L
Sbjct: 31 RKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGP 90
Query: 723 --EXXXXPXXPPXFVGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
P PP G P G P + P G P
Sbjct: 91 GPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP 134
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 505 RKRKGLKEGLPXLHXYLXKL 446
RKRKGLKEG+P L +L KL
Sbjct: 839 RKRKGLKEGIPALDNFLDKL 858
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 505 RKRKGLKEGLPXLHXYLXKL 446
RKRKGLKEG+P L +L KL
Sbjct: 839 RKRKGLKEGIPALDNFLDKL 858
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 505 RKRKGLKEGLPXLHXYLXKL 446
RKRKGLKEG+P L +L KL
Sbjct: 339 RKRKGLKEGIPALDNFLDKL 358
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 1221 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 1278
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 1279 GEKGEAGPPGAAGPPGAKGP 1298
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 505 RKRKGLKEGLPXLHXYLXKL 446
RKRKGLKEG+P L +L KL
Sbjct: 839 RKRKGLKEGIPALDNFLDKL 858
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 1105 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 1162
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 1163 GEKGEAGPPGAAGPPGAKGP 1182
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 505 RKRKGLKEGLPXLHXYLXKL 446
RKRKGLKEG+P L +L KL
Sbjct: 498 RKRKGLKEGIPALDNFLDKL 517
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 33.1 bits (72), Expect = 2.7
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 505 RKRKGLKEGLPXLHXYLXKL 446
RKRKGLKEG+P L +L KL
Sbjct: 839 RKRKGLKEGIPALDNFLDKL 858
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 1221 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 1278
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 1279 GEKGEAGPPGAAGPPGAKGP 1298
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 1182 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 1239
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 1240 GEKGEAGPPGAAGPPGAKGP 1259
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 1233 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 1290
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 1291 GEKGEAGPPGAAGPPGAKGP 1310
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 1221 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 1278
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 1279 GEKGEAGPPGAAGPPGAKGP 1298
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/80 (26%), Positives = 25/80 (31%)
Frame = -3
Query: 837 PRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXFVGXGVPDHQA 658
P PG P+ P G GPPG + +G E PP G G P +
Sbjct: 432 PGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN--PGPPGEAGVGGPKGER 489
Query: 657 XGXGSPADXXXXXPEGRXSP 598
G P G P
Sbjct: 490 GEKGEAGPPGAAGPPGAKGP 509
>BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 32.7 bits (71), Expect = 3.6
Identities = 25/90 (27%), Positives = 26/90 (28%)
Frame = -3
Query: 867 DXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXF 688
D P A P P P GP GPPG RG E P PP
Sbjct: 177 DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE--KGPAGPPGL 234
Query: 687 VGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
+G P G P P G P
Sbjct: 235 LGPPGPRGLPGEMGRPGPPGPPGPAGNPGP 264
>BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 32.7 bits (71), Expect = 3.6
Identities = 25/90 (27%), Positives = 26/90 (28%)
Frame = -3
Query: 867 DXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXF 688
D P A P P P GP GPPG RG E P PP
Sbjct: 177 DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE--KGPAGPPGL 234
Query: 687 VGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
+G P G P P G P
Sbjct: 235 LGPPGPRGLPGEMGRPGPPGPPGPAGNPGP 264
>AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein
protein.
Length = 441
Score = 32.7 bits (71), Expect = 3.6
Identities = 25/90 (27%), Positives = 26/90 (28%)
Frame = -3
Query: 867 DXXPXXXXFAPRTPGXMXPRAPXGPXXXGGPPGGIXXXXXTDVRGARLEXXXXPXXPPXF 688
D P A P P P GP GPPG RG E P PP
Sbjct: 179 DFLPDAIPLAHPVPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGE--KGPAGPPGL 236
Query: 687 VGXGVPDHQAXGXGSPADXXXXXPEGRXSP 598
+G P G P P G P
Sbjct: 237 LGPPGPRGLPGEMGRPGPPGPPGPAGNPGP 266
>L47668-1|AAB59577.1| 84|Homo sapiens alpha-2 collagen type I
protein.
Length = 84
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 20 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 77
>BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein.
Length = 215
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +2
Query: 608 LPSGXXXXXSAGEPXPXAWWSGTPXPTNXGGXXGXXXXSNRAPRTSVXXXXXIPPGGPPX 787
LP G S G P + G P P G G +P S P GPP
Sbjct: 60 LPGGQGPPGSPG-PKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPG 118
Query: 788 XXGPXGARG-XXXPGVRGA 841
G G++G PG RG+
Sbjct: 119 APGRDGSKGERGAPGPRGS 137
>AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein.
Length = 406
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +2
Query: 608 LPSGXXXXXSAGEPXPXAWWSGTPXPTNXGGXXGXXXXSNRAPRTSVXXXXXIPPGGPPX 787
LP G S G P + G P P G G +P S P GPP
Sbjct: 251 LPGGQGPPGSPG-PKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPG 309
Query: 788 XXGPXGARG-XXXPGVRGA 841
G G++G PG RG+
Sbjct: 310 APGRDGSKGERGAPGPRGS 328
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 32.3 bits (70), Expect = 4.7
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 GTPXPTNXGGXXGXXXXSNRA----PRTSVXXXXXIPPGGPPXXXGPXGARGXXXPGVRG 838
G P P G G + A PR S + P GP GP GA G PG +G
Sbjct: 502 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAG--QPGAKG 559
>AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein.
Length = 418
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +2
Query: 608 LPSGXXXXXSAGEPXPXAWWSGTPXPTNXGGXXGXXXXSNRAPRTSVXXXXXIPPGGPPX 787
LP G S G P + G P P G G +P S P GPP
Sbjct: 263 LPGGQGPPGSPG-PKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPG 321
Query: 788 XXGPXGARG-XXXPGVRGA 841
G G++G PG RG+
Sbjct: 322 APGRDGSKGERGAPGPRGS 340
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,248,038
Number of Sequences: 237096
Number of extensions: 2279301
Number of successful extensions: 9852
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9285
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22142890136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -