Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_A04_e25_02.seq
         (1469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    26   0.61 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   1.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   1.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   10.0 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   10.0 

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 740 SFLFIRKKQTFDYNNTIIVFYYYECFNFNQLIALWGTRQLNLTYG 606
           +F FI KK   + N+   VFY    F F  ++AL+G  Q+ +  G
Sbjct: 52  NFQFIDKKLN-NRNSKSRVFYENVNFQFGSILALFGVVQIYIFSG 95


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 141 RSCLREYQSSSPLCSDARLSC 203
           R  L  +++  P+C D +LSC
Sbjct: 96  RKVLPNFKTDEPICPDGKLSC 116


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 141 RSCLREYQSSSPLCSDARLSC 203
           R  L  +++  P+C D +LSC
Sbjct: 103 RKVLPNFKTDEPICPDGKLSC 123


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 355 LSELLHIFLVKFRVIFSGRVLVLLVFRNQIIDIALRLVEFHLVHA 221
           LS +++  L+ F  I +  VLVL+V R +     +  +  HL  A
Sbjct: 54  LSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLAIA 98


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 355 LSELLHIFLVKFRVIFSGRVLVLLVFRNQIIDIALRLVEFHLVHA 221
           LS +++  L+ F  I +  VLVL+V R +     +  +  HL  A
Sbjct: 54  LSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLAIA 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,005
Number of Sequences: 336
Number of extensions: 4083
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43940325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)