Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_A04_e25_02.seq
         (1469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.45 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          28   0.59 
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   7.3  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   7.3  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   7.3  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    24   9.7  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    24   9.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.7 bits (61), Expect = 0.45
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = +2

Query: 38  LVXSPGLQXIRHEGD-IPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYT 214
           L  S GL  +  EGD +  KG  ++  +   + +  E+ K+ SE    +   +  L  + 
Sbjct: 643 LAKSTGLDCVTLEGDQVSSKG-SLTGGYFNTSRSRLEMQKKRSEYSQLIQEHEKELADFR 701

Query: 215 GEGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDME-ELAQDE 361
            E        + E+N+N +VSE Q+ +    +    F++   +  L +DE
Sbjct: 702 AE------LKQTEANINSIVSEMQKTETKQGKSKDAFEKIQADIRLMKDE 745


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 28.3 bits (60), Expect = 0.59
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +2

Query: 209  YTGEGMDEMEFNEAESNVND-LVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 370
            +TG+G +++   E   +  D L  E ++  DA AEDD E ++E+ EE  +DE  +
Sbjct: 932  HTGQGNNKLIVRELLRHYPDGLQKEVKKEVDA-AEDDEEEEEEEQEE-EEDEDEE 984


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 218 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 361
           E  +    N ++   N  + EY+   D   +DD++FD +  + L  +E
Sbjct: 300 EDFEHAAINRSKKT-NPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEE 346


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 218 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 361
           E  +    N ++   N  + EY+   D   +DD++FD +  + L  +E
Sbjct: 70  EDFEHAAINRSKKT-NPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEE 116


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 7.3
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +2

Query: 218 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDE 361
           E  +    N ++   N  + EY+   D   +DD++FD +  + L  +E
Sbjct: 70  EDFEHAAINRSKKT-NPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEE 116


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 9.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 114 HSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTP 215
           H+ V+ +  R+C  E   SS LC   R   T  P
Sbjct: 132 HACVSLETMRNCPAERWDSSVLCEKVRSGVTVCP 165


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 9.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 114 HSSVTPQPSRSCLREYQSSSPLCSDARLSCTGTP 215
           H+ V+ +  R+C  E   SS LC   R   T  P
Sbjct: 281 HACVSLETMRNCPAERWDSSVLCEKVRSGVTVCP 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 898,428
Number of Sequences: 2352
Number of extensions: 16360
Number of successful extensions: 55
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 171498690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)