Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_A04_e25_02.seq
(1469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 162 5e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 158 1e-38
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 155 6e-38
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 155 1e-37
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 155 1e-37
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 105 1e-22
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 105 1e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 69 1e-11
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 69 1e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 69 1e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 1e-11
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 68 2e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 68 2e-11
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 68 2e-11
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 68 2e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 66 6e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 66 6e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 66 6e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 66 6e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 66 6e-11
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 66 8e-11
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 66 8e-11
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 66 8e-11
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 64 2e-10
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 34 0.22
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 34 0.22
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 30 4.8
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 30 4.8
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 6.3
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 29 6.3
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 8.3
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 29 8.3
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 8.3
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 8.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 163 bits (397), Expect = 2e-40
Identities = 71/88 (80%), Positives = 84/88 (95%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIPP+G+KM++TF+GN+TAIQELFKRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN
Sbjct: 355 DIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 260 VNDLVSEYQQYQDATAEDDTEFDQEDME 343
+NDLVSEYQQYQ+ATA+D+ EFD+ D +
Sbjct: 415 MNDLVSEYQQYQEATADDEGEFDEHDQD 442
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 162 bits (394), Expect = 5e-40
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIPP+GLKMS+TFIGN+TAIQELFKRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 260 VNDLVSEYQQYQDATAEDDTEFDQED 337
+NDLVSEYQQYQ+ATAE+D E D D
Sbjct: 415 MNDLVSEYQQYQEATAEEDGELDGTD 440
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 158 bits (383), Expect = 1e-38
Identities = 69/81 (85%), Positives = 79/81 (97%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIPP+GLKM++TF+GN+TAIQELFKRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN
Sbjct: 355 DIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 260 VNDLVSEYQQYQDATAEDDTE 322
+NDL+SEYQQYQ+ATAEDD +
Sbjct: 415 MNDLISEYQQYQEATAEDDVD 435
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 155 bits (377), Expect = 6e-38
Identities = 68/79 (86%), Positives = 78/79 (98%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIPP+GLKM++TF+GN+TAIQELFKRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN
Sbjct: 355 DIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 260 VNDLVSEYQQYQDATAEDD 316
+NDL+SEYQQYQ+ATAED+
Sbjct: 415 MNDLISEYQQYQEATAEDE 433
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 155 bits (375), Expect = 1e-37
Identities = 72/87 (82%), Positives = 80/87 (91%), Gaps = 2/87 (2%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIPP+GLKMS+TFIGN+TAIQELFKRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 260 VNDLVSEYQQYQDATAEDDT--EFDQE 334
+NDLVSEYQQYQ+A A++D FD E
Sbjct: 415 MNDLVSEYQQYQEAAADEDAAEAFDGE 441
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 155 bits (375), Expect = 1e-37
Identities = 72/87 (82%), Positives = 80/87 (91%), Gaps = 2/87 (2%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIPP+GLKMS+TFIGN+TAIQELFKRISEQF+AMFRRKAFLHWYTGEGMDEMEF EAESN
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 260 VNDLVSEYQQYQDATAEDDT--EFDQE 334
+NDLVSEYQQYQ+A A++D FD E
Sbjct: 415 MNDLVSEYQQYQEAAADEDAAEAFDGE 441
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (251), Expect = 1e-22
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIP +GLK S+TFI N+TAIQE KRIS+QF+ +FRRKAFLHWYT M+E EF +AE+
Sbjct: 353 DIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENK 409
Query: 260 VNDLVSEYQQYQ 295
VNDL+SE+QQY+
Sbjct: 410 VNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (251), Expect = 1e-22
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = +2
Query: 80 DIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESN 259
DIP +GLK S+TFI N+TAIQE KRIS+QF+ +FRRKAFLHWYT M+E EF +AE+
Sbjct: 353 DIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENK 409
Query: 260 VNDLVSEYQQYQ 295
VNDL+SE+QQY+
Sbjct: 410 VNDLISEFQQYE 421
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 68.5 bits (160), Expect = 1e-11
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +2
Query: 107 SSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQ 286
S I NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 380 SVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE 439
Query: 287 QYQDATAEDDTE 322
+ + DD +
Sbjct: 440 EIGEDELPDDID 451
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 68.5 bits (160), Expect = 1e-11
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +2
Query: 98 LKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVS 277
L+ + + NTTAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 371 LQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
Query: 278 EYQQY-QDATAEDDTEF 325
+Y++ D+ +D E+
Sbjct: 431 DYEEVGVDSFDPNDEEY 447
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 68.5 bits (160), Expect = 1e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +2
Query: 98 LKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVS 277
L+ + + NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 376 LQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 435
Query: 278 EYQQYQDATAEDDTEFD 328
+Y++ E D E D
Sbjct: 436 DYEEVGLDAGEPDEEDD 452
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 68.5 bits (160), Expect = 1e-11
Identities = 29/72 (40%), Positives = 45/72 (62%)
Frame = +2
Query: 107 SSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQ 286
S I NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 352 SVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE 411
Query: 287 QYQDATAEDDTE 322
+ + DD +
Sbjct: 412 EIGEDELPDDID 423
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 67.7 bits (158), Expect = 2e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 437
Query: 299 ATAEDDTEFDQE 334
+ ED+ E E
Sbjct: 438 DSMEDNGEEGDE 449
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 67.7 bits (158), Expect = 2e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 377 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 436
Query: 299 ATAEDDTEFDQE 334
+ ED+ E E
Sbjct: 437 DSMEDNGEEGDE 448
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 67.7 bits (158), Expect = 2e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 437
Query: 299 ATAEDDTEFDQE 334
+ ED+ E E
Sbjct: 438 DSMEDNGEEGDE 449
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 67.7 bits (158), Expect = 2e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 378 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV 437
Query: 299 ATAEDDTEFDQE 334
+ ED+ E E
Sbjct: 438 DSMEDNGEEGDE 449
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 66.1 bits (154), Expect = 6e-11
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQY-Q 295
+ NTTAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 LSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA 432
Query: 296 DATAEDD 316
D+ A D+
Sbjct: 433 DSDANDN 439
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 66.1 bits (154), Expect = 6e-11
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA DL + + Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEE 432
Query: 299 ATAEDDTEFDQEDMEE 346
A+ + ++E+ EE
Sbjct: 433 VGADSNEGGNEEEGEE 448
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 6e-11
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE--- 432
Query: 299 ATAEDDTEFDQEDMEE 346
D E +ED EE
Sbjct: 433 -VGADSNEGLEEDGEE 447
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 6e-11
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA DL + + Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEE 432
Query: 299 ATAEDDTEFDQEDMEE 346
A+ + ++E+ EE
Sbjct: 433 VGADSNEGGNEEEGEE 448
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 6e-11
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE--- 432
Query: 299 ATAEDDTEFDQEDMEE 346
D E +ED EE
Sbjct: 433 -VGADSNEGLEEDGEE 447
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 65.7 bits (153), Expect = 8e-11
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE--- 432
Query: 299 ATAEDDTEFDQEDMEE 346
D E +E+ EE
Sbjct: 433 -VGADSNEGGEEEGEE 447
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 65.7 bits (153), Expect = 8e-11
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 381 LSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSR 440
Query: 299 ATAEDDTEFDQ 331
TA+ + E D+
Sbjct: 441 DTADLEEENDE 451
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 65.7 bits (153), Expect = 8e-11
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ NTTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 376 LSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE--- 432
Query: 299 ATAEDDTEFDQEDMEE 346
D E +E+ EE
Sbjct: 433 -VGADSNEGGEEEGEE 447
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 64.1 bits (149), Expect = 2e-10
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +2
Query: 119 IGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEMEFNEAESNVNDLVSEYQQYQD 298
+ +TTAI E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE--- 69
Query: 299 ATAEDDTEFDQEDMEE 346
D E +ED EE
Sbjct: 70 -VGADSNEGLEEDGEE 84
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 113 TFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYT--GEGMDEMEFNEAESNVNDLVSEYQ 286
T + +QEL K I E+ R+ + W T + DE E+N+ E +++D+ ++
Sbjct: 701 TEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDEEEWND-EEDLSDVGEDFD 759
Query: 287 QYQDATAEDDTEFDQEDMEELAQDEHHD 370
D T D E ED+ +LA + H D
Sbjct: 760 --LDPTNHSDDEDPMEDV-DLAPEVHDD 784
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 113 TFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYT--GEGMDEMEFNEAESNVNDLVSEYQ 286
T + +QEL K I E+ R+ + W T + DE E+N+ E +++D+ ++
Sbjct: 701 TEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDEEEWND-EEDLSDVGEDFD 759
Query: 287 QYQDATAEDDTEFDQEDMEELAQDEHHD 370
D T D E ED+ +LA + H D
Sbjct: 760 --LDPTNHSDDEDPMEDV-DLAPEVHDD 784
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 113 TFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYT--GEGMDEMEFNEAESNVNDLVSEYQ 286
T + +QEL K I E+ R+ + W T + DE E+N+ E +++D+ ++
Sbjct: 701 TEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDEEEWND-EEDLSDVGEDFD 759
Query: 287 QYQDATAEDDTEFDQEDMEELAQDEHHD 370
D T D E ED+ +LA + H D
Sbjct: 760 --LDPTNHSDDEDPMEDV-DLAPEVHDD 784
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
protein F54F11.2 protein.
Length = 1589
Score = 31.1 bits (67), Expect = 2.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 683 FYYYECFNFNQLIALWGTRQLNLTY 609
FY Y C NFNQ ++ + R NL Y
Sbjct: 890 FYSYACGNFNQSVSFYTARAQNLVY 914
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +2
Query: 227 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 370
+E++ ++++ +D + ++ +D ED+ E D+E+ E +++E D
Sbjct: 565 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEED 612
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/48 (22%), Positives = 29/48 (60%)
Frame = +2
Query: 227 DEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQDEHHD 370
+E++ ++++ +D + ++ +D ED+ E D+E+ E +++E D
Sbjct: 575 NELKLDDSDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEED 622
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.5 bits (63), Expect = 6.3
Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Frame = +3
Query: 72 TRVTSRLKASRCPRHSSVTPQP-----SRSCLREYQSSSPLCSDARLSCTGTPARAWTRW 236
+R SR A R R S T + SRS R P+ S + TP R WTR
Sbjct: 320 SRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRA 379
Query: 237 NS-TRRRAMS---MIWFRNTSSTRTRPLKMTRNLTRKIWRSSLKT 359
S TR +A S + W S +R+R RNL K R K+
Sbjct: 380 RSRTRSQAKSSSTLTW--PLSPSRSRSNSNERNLKEKKDRKKKKS 422
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 218 EGMDEMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 358
E EME N +SN+N + SE QYQ + ++ F ++ +++L ++
Sbjct: 69 EDKKEMEGN-IQSNINAMKSENLQYQTQSHQEKKVFAEKKLQKLKEN 114
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 101 KMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEME---FNEAESNVNDL 271
K+S + N+T++ LF+ + ++ + ++AF+ + E +D ++A V DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 272 VSEYQ 286
+ EY+
Sbjct: 428 LDEYK 432
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 230 EMEFNEAESNVNDLVSEYQQYQDATAEDDTEFDQEDMEELAQD 358
E +FN A ND++ ++ + AE +T+F +++ ELA D
Sbjct: 164 ERKFNTAIREANDILEDFDKKSKQVAE-NTKFVAKELAELAAD 205
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 101 KMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEGMDEME---FNEAESNVNDL 271
K+S + N+T++ LF+ + ++ + ++AF+ + E +D ++A V DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 272 VSEYQ 286
+ EY+
Sbjct: 428 LDEYK 432
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 278 EYQQYQDATAEDDTEFDQEDMEELAQDE 361
E+++Y+D E++ EFD E++EEL +
Sbjct: 28 EFEEYEDELLEEEEEFD-EELEELENSD 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,159,553
Number of Sequences: 27780
Number of extensions: 388374
Number of successful extensions: 1347
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4214704590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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