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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
61 A_BomoN4EE_TR10004_c0_g1_i1
298bp
 hypothetical_protein_FOCG_05209_[Fusarium_oxysporum_f._sp._radicis-lycopersici_26381]
FPKM:0.27 TPM:0.35
62 A_BomoN4EE_TR100050_c0_g1_i1
388bp
 endonuclease-reverse_transcriptase_[Danaus_plexippus]
FPKM:6.66 TPM:8.87
63 A_BomoN4EE_TR100050_c0_g1_i2
324bp
 endonuclease-reverse_transcriptase_[Danaus_plexippus]
FPKM:4.78 TPM:6.37
64 A_BomoN4EE_TR100051_c0_g1_i1
471bp
 DNA_topoisomerase_I_[Medicago_truncatula]
FPKM:1.58 TPM:2.10
65 A_BomoN4EE_TR100051_c0_g1_i2
404bp
 DNA_topoisomerase_I_[Medicago_truncatula]
FPKM:2.04 TPM:2.71
66 A_BomoN4EE_TR100052_c0_g1_i1
1058bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.50 TPM:0.67
67 A_BomoN4EE_TR100053_c0_g1_i1
3154bp
 PREDICTED:_histone-lysine_N-methyltransferase_2D-like_isoform_X3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
FPKM:25.54 TPM:34.01
68 A_BomoN4EE_TR100054_c0_g1_i1
1767bp
 PREDICTED:_uncharacterized_protein_LOC106140166_isoform_X1_[Amyelois_transitella]
FPKM:109.11 TPM:145.34
69 A_BomoN4EE_TR100054_c0_g1_i2
1755bp
 PREDICTED:_uncharacterized_protein_LOC106140166_isoform_X1_[Amyelois_transitella]
FPKM:300.07 TPM:399.70
70 A_BomoN4EE_TR100055_c0_g1_i1
263bp
FPKM:1.50 TPM:2.00
71 A_BomoN4EE_TR100055_c0_g2_i1
391bp
FPKM:1.02 TPM:1.36
72 A_BomoN4EE_TR100055_c0_g3_i1
278bp
FPKM:0.32 TPM:0.43
73 A_BomoN4EE_TR100055_c0_g4_i1
246bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.46 TPM:0.62
74 A_BomoN4EE_TR100056_c0_g1_i1
2694bp
 PREDICTED:_WD_repeat-containing_protein_48_homolog_isoform_X1_[Bombyx_mori]
FPKM:22.09 TPM:29.42
75 A_BomoN4EE_TR100057_c0_g1_i1
6019bp
 RNA-directed_RNA_polymerase_L_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0001172 P transcription, RNA-templated
GO:0003824 F catalytic activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005524 F ATP binding
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019012 C virion component
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
GO:0042025 C host cell nucleus
FPKM:1.54 TPM:2.05
76 A_BomoN4EE_TR100057_c0_g2_i1
390bp
 RNA-directed_RNA_polymerase_L_[Papilio_machaon]
FPKM:1.49 TPM:1.98
77 A_BomoN4EE_TR100058_c0_g1_i1
1372bp
 transcriptional_activator_FleR_[Vibrio_nigripulchritudo]
FPKM:0.38 TPM:0.51
78 A_BomoN4EE_TR100058_c0_g2_i1
1371bp
 transcriptional_activator_FleR_[Vibrio_nigripulchritudo]
FPKM:6.95 TPM:9.26
79 A_BomoN4EE_TR100059_c0_g1_i1
229bp
 PREDICTED:_acetylcholinesterase_type_1_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
80 A_BomoN4EE_TR10005_c0_g1_i1
555bp
 PREDICTED:_transmembrane_7_superfamily_member_3-like_isoform_X2_[Bombyx_mori]
FPKM:0.16 TPM:0.21
81 A_BomoN4EE_TR100060_c0_g1_i1
800bp
 hypothetical_protein_[Coprothermobacter_proteolyticus]
FPKM:0.32 TPM:0.43
82 A_BomoN4EE_TR100060_c0_g2_i1
799bp
 hypothetical_protein_[Coprothermobacter_proteolyticus]
FPKM:4.03 TPM:5.36
83 A_BomoN4EE_TR100061_c0_g1_i1
452bp
 glutaminase_[Vibrio_litoralis]
FPKM:1.12 TPM:1.49
84 A_BomoN4EE_TR100062_c3_g1_i1
924bp
 PREDICTED:_uncharacterized_protein_LOC105841570_[Bombyx_mori]
FPKM:2.62 TPM:3.49
85 A_BomoN4EE_TR100063_c0_g1_i1
756bp
 amsh_[Danaus_plexippus]
FPKM:0.63 TPM:0.84
86 A_BomoN4EE_TR100063_c0_g2_i1
3156bp
 PREDICTED:_STAM-binding_protein-like_A_[Amyelois_transitella]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:8.64 TPM:11.51
87 A_BomoN4EE_TR100063_c1_g1_i1
234bp
FPKM:0.00 TPM:0.00
88 A_BomoN4EE_TR100063_c1_g2_i1
233bp
FPKM:1.11 TPM:1.48
89 A_BomoN4EE_TR100064_c0_g1_i1
2904bp
 PREDICTED:_angiotensin-converting_enzyme_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007289 P spermatid nucleus differentiation
GO:0007291 P sperm individualization
GO:0007552 P metamorphosis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0008270 F zinc ion binding
GO:0009609 P response to symbiotic bacterium
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:1.42 TPM:1.89
90 A_BomoN4EE_TR100065_c1_g1_i1
3684bp
 growth_arrest-specific_protein_2_[Bombyx_mori]
GO:0001578 P microtubule bundle formation
GO:0001725 C stress fiber
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008093 F cytoskeletal anchor activity
GO:0009267 P cellular response to starvation
GO:0010629 P negative regulation of gene expression
GO:0030308 P negative regulation of cell growth
GO:0045647 P negative regulation of erythrocyte differentiation
GO:0046966 F thyroid hormone receptor binding
GO:0051726 P regulation of cell cycle
GO:0097067 P cellular response to thyroid hormone stimulus
FPKM:26.18 TPM:34.87
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