Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1	O_BomoBR100000_complete:A_BomoBR_DN30705_c5_g1_i2 104bp	Bomo_Chr20	hypothetical_protein_ALC60_00386_[Trachymyrmex_zeteki]
2	O_BomoBR100001_5prime_partial:A_BomoBR_DN30705_c5_g4_i2 103bp	Bomo_Chr20	microsomal_triglyceride_transfer_protein,_partial_[Bombyx_mori]
3	O_BomoBR100002_complete:A_BomoBR_DN30705_c5_g1_i6 384bp	Bomo_Chr20	glutamine_synthetase_2_cytoplasmic_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003824 F catalytic activity GO:0004356 F glutamate-ammonia ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006538 P glutamate catabolic process GO:0006542 P glutamine biosynthetic process GO:0006807 P nitrogen compound metabolic process GO:0007416 P synapse assembly GO:0016874 F ligase activity GO:0045213 P neurotransmitter receptor metabolic process
4	O_BomoBR100003_complete:A_BomoBR_DN30705_c5_g1_i6 105bp	Bomo_Chr20
5	O_BomoBR100004_complete:A_BomoBR_DN30705_c5_g1_i7 384bp	Bomo_Chr20	glutamine_synthetase_2_cytoplasmic_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003824 F catalytic activity GO:0004356 F glutamate-ammonia ligase activity GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0006538 P glutamate catabolic process GO:0006542 P glutamine biosynthetic process GO:0006807 P nitrogen compound metabolic process GO:0007416 P synapse assembly GO:0016874 F ligase activity GO:0045213 P neurotransmitter receptor metabolic process
6	O_BomoBR100005_complete:A_BomoBR_DN30705_c5_g1_i7 120bp	Bomo_Chr20	ovary_C/EBPg_transcription_factor_[Bombyx_mori]	GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001889 P liver development GO:0003677 F DNA binding GO:0003690 F double-stranded DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006955 P immune response GO:0008134 F transcription factor binding GO:0016071 P mRNA metabolic process GO:0030183 P B cell differentiation GO:0042267 P natural killer cell mediated cytotoxicity GO:0042803 F protein homodimerization activity GO:0043353 P enucleate erythrocyte differentiation GO:0043388 P positive regulation of DNA binding GO:0043433 P negative regulation of DNA-binding transcription factor activity GO:0043565 F sequence-specific DNA binding GO:0044377 F RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending GO:0045078 P positive regulation of interferon-gamma production GO:0045739 P positive regulation of DNA repair GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0051091 P positive regulation of DNA-binding transcription factor activity
7	O_BomoBR100006_complete:A_BomoBR_DN30705_c5_g1_i7 105bp	Bomo_Chr20
8	O_BomoBR100007_5prime_partial:A_BomoBR_DN30705_c5_g6_i1 160bp	Bomo_Chr20	PREDICTED:_uncharacterized_protein_LOC105384708,_partial_[Plutella_xylostella]
9	O_BomoBR100008_complete:A_BomoBR_DN30705_c5_g6_i2 176bp	Bomo_Chr8	PREDICTED:_uncharacterized_protein_LOC105384708,_partial_[Plutella_xylostella]
10	O_BomoBR100009_complete:A_BomoBR_DN30705_c5_g6_i2 121bp	Bomo_Chr8
11	O_BomoBR10000_complete:A_BomoBR_DN31369_c1_g2_i13 140bp	Bomo_Chr14
12	O_BomoBR100010_complete:A_BomoBR_DN30705_c5_g4_i3 134bp	Bomo_Chr20	PREDICTED:_uncharacterized_protein_LOC106134470_[Amyelois_transitella]
13	O_BomoBR100011_complete:A_BomoBR_DN30705_c5_g1_i8 120bp	Bomo_Chr20	ovary_C/EBPg_transcription_factor_[Bombyx_mori]	GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0001889 P liver development GO:0003677 F DNA binding GO:0003690 F double-stranded DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005515 F protein binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006955 P immune response GO:0008134 F transcription factor binding GO:0016071 P mRNA metabolic process GO:0030183 P B cell differentiation GO:0042267 P natural killer cell mediated cytotoxicity GO:0042803 F protein homodimerization activity GO:0043353 P enucleate erythrocyte differentiation GO:0043388 P positive regulation of DNA binding GO:0043433 P negative regulation of DNA-binding transcription factor activity GO:0043565 F sequence-specific DNA binding GO:0044377 F RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending GO:0045078 P positive regulation of interferon-gamma production GO:0045739 P positive regulation of DNA repair GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046982 F protein heterodimerization activity GO:0051091 P positive regulation of DNA-binding transcription factor activity
14	O_BomoBR100012_complete:A_BomoBR_DN30705_c5_g6_i3 139bp	Bomo_Chr18	PREDICTED:_uncharacterized_protein_LOC105384708,_partial_[Plutella_xylostella]
15	O_BomoBR100013_complete:A_BomoBR_DN30705_c5_g4_i4 134bp	Bomo_Chr11	PREDICTED:_uncharacterized_protein_LOC106134470_[Amyelois_transitella]
16	O_BomoBR100014_complete:A_BomoBR_DN30761_c0_g1_i1 360bp	Bomo_Chr19	CD109_antigen_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
17	O_BomoBR100015_complete:A_BomoBR_DN30761_c0_g1_i2 229bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
18	O_BomoBR100016_complete:A_BomoBR_DN30761_c0_g1_i3 1549bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
19	O_BomoBR100017_complete:A_BomoBR_DN30761_c0_g1_i4 1816bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
20	O_BomoBR100018_complete:A_BomoBR_DN30761_c0_g1_i5 1797bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
21	O_BomoBR100019_complete:A_BomoBR_DN30761_c0_g1_i6 1030bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
22	O_BomoBR10001_complete:A_BomoBR_DN31369_c1_g2_i13 132bp	Bomo_Chr14
23	O_BomoBR100020_complete:A_BomoBR_DN30761_c0_g1_i8 1483bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
24	O_BomoBR100021_5prime_partial:A_BomoBR_DN30761_c0_g1_i9 110bp	Bomo_Chr19
25	O_BomoBR100022_complete:A_BomoBR_DN30761_c0_g1_i10 1816bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
26	O_BomoBR100023_complete:A_BomoBR_DN30761_c0_g1_i11 1136bp	Bomo_Chr19	LOW_QUALITY_PROTEIN:_CD109_antigen,_partial_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
27	O_BomoBR100024_5prime_partial:A_BomoBR_DN30761_c0_g1_i11 206bp	Bomo_Chr19
28	O_BomoBR100025_internal:A_BomoBR_DN30722_c0_g1_i1 467bp	Bomo_Chr9	hypothetical_protein_3_-_cabbage_looper_transposon_TED_(fragment)
29	O_BomoBR100026_5prime_partial:A_BomoBR_DN30722_c0_g1_i2 791bp	Bomo_Chr20	ORF_B_(bases_1850-5560)_first_start_codon_at_2306_[Autographa_californica_nucleopolyhedrovirus]	GO:0003676 F nucleic acid binding GO:0003964 F RNA-directed DNA polymerase activity GO:0004190 F aspartic-type endopeptidase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0006278 P RNA-dependent DNA biosynthetic process GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0015074 P DNA integration GO:0016740 F transferase activity GO:0016779 F nucleotidyltransferase activity GO:0016787 F hydrolase activity GO:0090305 P nucleic acid phosphodiester bond hydrolysis
30	O_BomoBR100027_3prime_partial:A_BomoBR_DN30722_c0_g1_i2 293bp	Bomo_Chr20	ORF_C_(bases_5475-7223)_first_start_codon_at_5985,_partial_[Autographa_californica_nucleopolyhedrovirus]