SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2019/10/06
 
next from show/47701
No. Name
Length
Chromosome No./Scaffold Id
Scaffold Length
BLAST (vs nr) Gene ontology Transcript
Level
1 A_BomoMSG_c0_g1_i1
302bp
40S_ribosomal_protein_S29_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
FPKM:1757.80 TPM:914.44
2 A_BomoMSG_c10000_g1_i1
323bp
protein_borderless_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005887 C integral to plasma membrane
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007422 P peripheral nervous system development
GO:0007629 P flight behavior
GO:0007638 P mechanosensory behavior
GO:0008039 P synaptic target recognition
FPKM:3.81 TPM:1.98
3 A_BomoMSG_c10004_g1_i1
232bp
FPKM:3.58 TPM:1.86
4 A_BomoMSG_c10007_g1_i1
337bp
FPKM:3.21 TPM:1.67
5 A_BomoMSG_c10008_g1_i1
480bp
FPKM:2.54 TPM:1.32
6 A_BomoMSG_c1000_g1_i1
212bp
zinc_finger_protein_91_[Bombyx_mori]
FPKM:11.07 TPM:5.76
7 A_BomoMSG_c10010_g1_i1
364bp
FPKM:1.68 TPM:0.87
8 A_BomoMSG_c10014_g1_i1
698bp
PREDICTED:_uncharacterized_protein_LOC105556339,_partial_[Vollenhovia_emeryi]
FPKM:1.75 TPM:0.91
9 A_BomoMSG_c10015_g1_i1
227bp
FPKM:2.28 TPM:1.19
10 A_BomoMSG_c10017_g1_i1
749bp
gloverin_2_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
FPKM:46.49 TPM:24.19
11 A_BomoMSG_c10018_g1_i1
402bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Amyelois_transitella]
FPKM:4.52 TPM:2.35
12 A_BomoMSG_c10019_g1_i1
310bp
PREDICTED:_uncharacterized_protein_LOC106131099_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:2.62 TPM:1.36
13 A_BomoMSG_c10020_g1_i1
1267bp
protein_LLP_homolog_[Bombyx_mori]
FPKM:195.09 TPM:101.49
14 A_BomoMSG_c10021_g1_i1
718bp
unknown_unsecreted_protein_[Papilio_xuthus]
FPKM:34.85 TPM:18.13
15 A_BomoMSG_c10021_g1_i2
423bp
probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008168 F methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
FPKM:43.59 TPM:22.67
16 A_BomoMSG_c10022_g1_i1
669bp
40S_ribosomal_protein_S7_isoform_X1_[Helicoverpa_armigera]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:2937.40 TPM:1528.09
17 A_BomoMSG_c10023_g1_i1
361bp
alcohol_dehydrogenase_2_[Bombyx_mori]
FPKM:59.09 TPM:30.74
18 A_BomoMSG_c10024_g1_i1
1685bp
thymosin_isoform_2_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
FPKM:3.89 TPM:2.02
19 A_BomoMSG_c10024_g1_i2
1799bp
thymosin_isoform_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007015 P actin filament organization
FPKM:49.44 TPM:25.72
20 A_BomoMSG_c10025_g1_i1
960bp
proteasome_subunit_beta_type-4_[Bombyx_mori]
GO:0000502 C proteasome complex (sensu Eukaryota)
GO:0001530 F lipopolysaccharide binding
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002862 P negative regulation of inflammatory response to antigenic stimulus
GO:0004175 F endopeptidase activity
GO:0004298 F threonine endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex (sensu Eukaryota)
FPKM:136.24 TPM:70.88
21 A_BomoMSG_c10026_g1_i1
304bp
FPKM:4.67 TPM:2.43
22 A_BomoMSG_c10027_g1_i1
248bp
PREDICTED:_uncharacterized_protein_LOC105384856_[Plutella_xylostella]
FPKM:4.84 TPM:2.52
23 A_BomoMSG_c10028_g1_i1
489bp
FPKM:1.41 TPM:0.74
24 A_BomoMSG_c10030_g1_i1
1592bp
phospholipid_phosphatase_5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral to plasma membrane
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0008195 F phosphatidate phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016787 F hydrolase activity
GO:0046839 P phospholipid dephosphorylation
FPKM:112.25 TPM:58.40
25 A_BomoMSG_c10031_g1_i1
235bp
FPKM:4.85 TPM:2.52
26 A_BomoMSG_c10032_g1_i1
505bp
cytochrome_b-c1_complex_subunit_8-like_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006122 P mitochondrial electron transport, ubiquinol to cytochrome c
GO:0008121 F ubiquinol-cytochrome-c reductase activity
GO:0016020 C membrane
GO:0021539 P subthalamus development
GO:0021548 P pons development
GO:0021680 P cerebellar Purkinje cell layer development
GO:0021766 P hippocampus development
GO:0021794 P thalamus development
FPKM:89.96 TPM:46.80
27 A_BomoMSG_c10033_g1_i1
1424bp
ribosomal_RNA_processing_protein_1_homolog_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016072 P rRNA metabolic process
GO:0030687 C nucleolar preribosome, large subunit precursor
GO:0030688 C nucleolar preribosome, small subunit precursor
FPKM:43.25 TPM:22.50
28 A_BomoMSG_c10034_g1_i1
260bp
post-GPI_attachment_to_proteins_factor_2-like_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006506 P GPI anchor biosynthetic process
GO:0008565 F protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
FPKM:8.12 TPM:4.23
29 A_BomoMSG_c10035_g1_i1
1410bp
alpha-tocopherol_transfer_protein_[Bombyx_mori]
GO:0001890 P placenta development
GO:0001892 P embryonic placenta development
GO:0005215 F transporter activity
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005622 C intracellular
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007584 P response to nutrient
FPKM:394.13 TPM:205.03
30 A_BomoMSG_c10036_g1_i1
209bp
formin-like_protein_3_[Helicoverpa_armigera]
FPKM:16.37 TPM:8.51
next from show/47701

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).