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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_TrvaFAMAMG_TR10000c0_g1_i1
602bp
FPKM:0.83 TPM:0.82
2 A_TrvaFAMAMG_TR10001c0_g1_i1
252bp
FPKM:0.23 TPM:0.22
3 A_TrvaFAMAMG_TR10002c0_g1_i1
355bp
phosphoacetyl-glucosamine_mutase_[Encephalitozoon_intestinalis_ATCC_50506]
GO:0000287 F magnesium ion binding
GO:0004610 F phosphoacetylglucosamine mutase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006048 P UDP-N-acetylglucosamine biosynthetic process
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0046872 F metal ion binding
GO:0071555 P cell wall organization
GO:0071704 P organic substance metabolic process
FPKM:0.23 TPM:0.22
4 A_TrvaFAMAMG_TR10003c0_g1_i1
541bp
FPKM:10.19 TPM:9.98
5 A_TrvaFAMAMG_TR10004c0_g1_i1
343bp
PREDICTED:_runt-related_transcription_factor_3_isoform_X1_[Bombyx_mori]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0002062 P chondrocyte differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0030097 P hemopoiesis
GO:0030182 P neuron differentiation
GO:0042826 F histone deacetylase binding
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0045667 P regulation of osteoblast differentiation
GO:0045778 P positive regulation of ossification
FPKM:0.54 TPM:0.53
6 A_TrvaFAMAMG_TR10005c0_g1_i1
243bp
hypothetical_protein_VR65_00210_[Desulfobulbaceae_bacterium_BRH_c16a]
FPKM:0.63 TPM:0.62
7 A_TrvaFAMAMG_TR10006c0_g1_i1
356bp
FPKM:0.50 TPM:0.49
8 A_TrvaFAMAMG_TR10007c0_g1_i1
1563bp
PREDICTED:_carbonyl_reductase_[NADPH]_3-like_[Amyelois_transitella]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016655 F oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0017144 P xenobiotic metabolic process
GO:0019371 P cyclooxygenase pathway
GO:0030855 P epithelial cell differentiation
GO:0042373 P vitamin K metabolic process
GO:0047021 F 15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221 F prostaglandin-E2 9-reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
FPKM:20.70 TPM:20.28
9 A_TrvaFAMAMG_TR10008c0_g1_i1
477bp
FPKM:0.67 TPM:0.65
10 A_TrvaFAMAMG_TR10009c0_g1_i1
1207bp
myosin_light_polypeptide_9_isoform_B_[Bombyx_mori]
GO:0000281 P mitotic cytokinesis
GO:0001736 P establishment of planar polarity
GO:0003384 P apical constriction involved in gastrulation
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0007298 P border follicle cell migration
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0016324 C apical plasma membrane
GO:0016459 C myosin complex
GO:0016460 C myosin II complex
GO:0019749 P cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0022008 P neurogenesis
GO:0030048 P actin filament-based movement
GO:0030496 C midbody
GO:0030707 P ovarian follicle cell development
GO:0031036 P myosin II filament assembly
GO:0031941 C filamentous actin
GO:0032036 F myosin heavy chain binding
GO:0032154 C cleavage furrow
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035148 P tube formation
GO:0035159 P regulation of tube length, open tracheal system
GO:0035183 C female germline ring canal inner rim
GO:0035191 P nuclear axial expansion
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042060 P wound healing
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051233 C spindle midzone
GO:0060288 P formation of a compartment boundary
GO:0090254 P cell elongation involved in imaginal disc-derived wing morphogenesis
FPKM:88.64 TPM:86.85
11 A_TrvaFAMAMG_TR1000c0_g1_i1
983bp
U1_small_nuclear_ribonucleoprotein_70_kDa,_partial_[Picoides_pubescens]
FPKM:3.17 TPM:3.11
12 A_TrvaFAMAMG_TR10010c0_g1_i1
443bp
FPKM:0.67 TPM:0.65
13 A_TrvaFAMAMG_TR10011c0_g1_i1
260bp
FPKM:0.53 TPM:0.52
14 A_TrvaFAMAMG_TR10012c0_g1_i1
299bp
FPKM:1.71 TPM:1.68
15 A_TrvaFAMAMG_TR10013c0_g1_i1
445bp
hypothetical_protein_KGM_05387_[Danaus_plexippus]
FPKM:0.82 TPM:0.80
16 A_TrvaFAMAMG_TR10014c0_g1_i1
1973bp
FPKM:1.07 TPM:1.05
17 A_TrvaFAMAMG_TR10014c0_g2_i1
1974bp
FPKM:0.19 TPM:0.19
18 A_TrvaFAMAMG_TR10015c0_g1_i1
708bp
FPKM:1.08 TPM:1.06
19 A_TrvaFAMAMG_TR10016c0_g1_i1
293bp
PREDICTED:_ATP-dependent_DNA_helicase_Q-like_1_[Setaria_italica]
FPKM:0.32 TPM:0.32
20 A_TrvaFAMAMG_TR10017c0_g1_i1
238bp
FPKM:0.53 TPM:0.52
21 A_TrvaFAMAMG_TR10018c0_g1_i1
406bp
neuropeptide_F_2_precursor_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0007218 P neuropeptide signaling pathway
FPKM:0.99 TPM:0.97
22 A_TrvaFAMAMG_TR10019c0_g1_i1
1252bp
FPKM:2.41 TPM:2.36
23 A_TrvaFAMAMG_TR1001c0_g1_i1
484bp
FPKM:0.65 TPM:0.64
24 A_TrvaFAMAMG_TR10020c0_g1_i1
257bp
homeobox_and_C2H2_transcription_factor,_putative_[Byssochlamys_spectabilis_No._5]
FPKM:13.30 TPM:13.03
25 A_TrvaFAMAMG_TR10021c0_g1_i1
462bp
FPKM:0.74 TPM:0.72
26 A_TrvaFAMAMG_TR10022c0_g1_i1
462bp
FPKM:0.48 TPM:0.47
27 A_TrvaFAMAMG_TR10023c0_g1_i1
1078bp
cuticular_protein_hypothetical_16_precursor_[Bombyx_mori]
FPKM:0.66 TPM:0.65
28 A_TrvaFAMAMG_TR10024c0_g1_i1
337bp
FPKM:0.68 TPM:0.67
29 A_TrvaFAMAMG_TR10025c0_g1_i1
507bp
FPKM:8.54 TPM:8.36
30 A_TrvaFAMAMG_TR10026c0_g1_i1
488bp
H+_transporting_ATP_synthase_subunit_e_[Bombyx_mori]
GO:0000276 C mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046034 P ATP metabolic process
FPKM:517.05 TPM:506.59
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