SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2019/10/06
 
next from show/327
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1 wdV10385
811bp
chromo19/Bm_scaf60
2449460bp
UniRef50_UPI00003C0E84 (53%/26)
Cluster: PREDICTED: similar to c-Jun protein; n=1; Apis mellifera|Rep: PREDICTED: similar to c-Jun protein - Apis mellifera
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-dependent
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription
GO:0046983 F protein dimerization activity
2 wdV10386
420bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P42677 (83%/81)
Cluster: 40S ribosomal protein S27; n=74; Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell proliferation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3 wdV10387
682bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q9G839 (56%/98)
Cluster: Cytochrome c oxidase subunit 2; n=214; Mandibulata|Rep: Cytochrome c oxidase subunit 2 - Hypoderma lineatum (Early cattle grub) (Common cattle grub)
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respiratory chain
GO:0006118 P electron transport
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
4 wdV10388
543bp
chromo21/Bm_scaf7
8313734bp
UniRef50_P62841 (90%/66)
Cluster: 40S ribosomal protein S15; n=46; cellular organisms|Rep: 40S ribosomal protein S15 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000056 P ribosomal small subunit export from nucleus
GO:0005737 C cytoplasm
GO:0042254 P ribosome biogenesis and assembly
GO:0003723 F RNA binding
GO:0019843 F rRNA binding
5 wdV10389
797bp
chromo4/Bm_scaf13
6731059bp
UniRef50_A4KWG0 (63%/49)
Cluster: Reverse transcriptase; n=3; Ostrinia nubilalis|Rep: Reverse transcriptase - Ostrinia nubilalis (European corn borer)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA replication
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
6 wdV10390
737bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P05388 (68%/98)
Cluster: 60S acidic ribosomal protein P0; n=171; Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis and assembly
7 wdV10391
602bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P15880 (87%/89)
Cluster: 40S ribosomal protein S2; n=284; Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
8 wdV10392
814bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (87%/95)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein complex
GO:0051258 P protein polymerization
9 wdV10393
497bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P46776 (56%/80)
Cluster: 60S ribosomal protein L27a; n=204; Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
10 wdV10394
574bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q25504 (64%/54)
Cluster: Larval cuticle protein 16/17 precursor; n=5; Obtectomera|Rep: Larval cuticle protein 16/17 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005198 F structural molecule activity
GO:0042302 F structural constituent of cuticle
11 wdV10395
832bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q14204 (56%/87)
Cluster: Dynein heavy chain, cytosolic; n=51; Eumetazoa|Rep: Dynein heavy chain, cytosolic - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003774 F motor activity
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization and biogenesis
GO:0016887 F ATPase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0030286 C dynein complex
GO:0042623 F ATPase activity, coupled
GO:0005813 C centrosome
GO:0005938 C cell cortex
GO:0030139 C endocytic vesicle
12 wdV10397
845bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GZJ8 (82%/108)
Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bombyx mori (Silk moth)
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006302 P double-strand break repair
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0000723 P telomere maintenance
GO:0004518 F nuclease activity
GO:0006281 P DNA repair
GO:0006974 P response to DNA damage stimulus
GO:0007001 P chromosome organization and biogenesis (sensu Eukaryota)
GO:0007126 P meiosis
GO:0031572 P G2/M transition DNA damage checkpoint
13 wdV10398
673bp
chromo10/Bm_scaf44
3277875bp
UniRef50_Q5MPB3 (56%/66)
Cluster: Hemolymph proteinase 21; n=4; Manduca sexta|Rep: Hemolymph proteinase 21 - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0003824 F catalytic activity
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
14 wdV10399
600bp
chromo25/Bm_scaf32
4385969bp
UniRef50_P33992 (72%/86)
Cluster: DNA replication licensing factor MCM5; n=51; Eukaryota|Rep: DNA replication licensing factor MCM5 - Homo sapiens (Human)
GO:0000074 P regulation of progression through cell cycle
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008094 F DNA-dependent ATPase activity
GO:0000910 P cytokinesis
GO:0007049 P cell cycle
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040016 P embryonic cleavage
15 wdV10400
382bp
chromo20/Bm_scaf37
4206046bp
UniRef50_P33514 (81%/91)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid particle
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
16 wdV10401
768bp
chromo19/Bm_scaf60
2449460bp
UniRef50_Q99LT6 (59%/171)
Cluster: Eef2 protein; n=26; Eukaryota|Rep: Eef2 protein - Mus musculus (Mouse)
GO:0005525 F GTP binding
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006412 P translation
17 wdV10402
773bp
chromo19/Bm_scaf28
4702674bp
UniRef50_Q22D07 (32%/67)
Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210
GO:0003677 F DNA binding
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0000166 F nucleotide binding
GO:0003774 F motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007018 P microtubule-based movement
18 wdV10403
796bp
chromo8/Bm_scaf76
1642413bp
UniRef50_Q6UV17 (85%/20)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA replication
GO:0003677 F DNA binding
GO:0003702 F RNA polymerase II transcription factor activity
GO:0005634 C nucleus
GO:0006352 P transcription initiation
GO:0016986 F transcription initiation factor activity
GO:0051090 P regulation of transcription factor activity
19 wdV10404
565bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62266 (82%/80)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
20 wdV10405
814bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q5MGK5 (78%/94)
Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005811 C lipid particle
GO:0030529 C ribonucleoprotein complex
21 wdV10406
813bp
chromo11/Bm_scaf35
4373199bp
UniRef50_A5B9M9 (34%/50)
Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape)
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F hydrogen ion transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016787 F hydrolase activity
GO:0046933 F hydrogen ion transporting ATP synthase activity, rotational mechanism
GO:0046961 F hydrogen ion transporting ATPase activity, rotational mechanism
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
22 wdV10407
711bp
chromo23/Bm_scaf12
6701349bp
UniRef50_P52813 (83%/84)
Cluster: 40S ribosomal protein S3a; n=17; Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006413 P translational initiation
GO:0006917 P induction of apoptosis
23 wdV10408
583bp
chromo5/Bm_scaf54
2693215bp
UniRef50_Q8ITS7 (80%/55)
Cluster: Heat shock-like protein; n=1; Galleria mellonella|Rep: Heat shock-like protein - Galleria mellonella (Wax moth)
GO:0006950 P response to stress
GO:0007275 P multicellular organismal development
GO:0042802 F identical protein binding
24 wdV10410
821bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q23EC2 (23%/71)
Cluster: Cyclin, N-terminal domain containing protein; n=3; Eukaryota|Rep: Cyclin, N-terminal domain containing protein - Tetrahymena thermophila SB210
GO:0000074 P regulation of progression through cell cycle
GO:0006118 P electron transport
GO:0005509 F calcium ion binding
GO:0006457 P protein folding
25 wdV10411
769bp
chromo25/Bm_scaf65
2150616bp
UniRef50_UPI0000D569A2 (32%/83)
Cluster: PREDICTED: similar to Zinc finger protein 84 (Zinc finger protein HPF2); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Zinc finger protein 84 (Zinc finger protein HPF2) - Tribolium castaneum
26 wdV10412
849bp
chromo26/Bm_scaf34
4438494bp
UniRef50_P18432 (72%/85)
Cluster: Myosin regulatory light chain 2; n=17; Pancrustacea|Rep: Myosin regulatory light chain 2 - Drosophila melanogaster (Fruit fly)
GO:0003774 F motor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0016459 C myosin complex
27 wdV10413
805bp
chromo2/Bm_scaf73
1903914bp
UniRef50_Q9BZE4 (78%/92)
Cluster: Nucleolar GTP-binding protein 1; n=57; Eukaryota|Rep: Nucleolar GTP-binding protein 1 - Homo sapiens (Human)
GO:0000074 P regulation of progression through cell cycle
GO:0000079 P regulation of cyclin-dependent protein kinase activity
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008156 P negative regulation of DNA replication
GO:0008285 P negative regulation of cell proliferation
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030336 P negative regulation of cell migration
GO:0031397 P negative regulation of protein ubiquitination
GO:0033342 P negative regulation of collagen binding
GO:0042254 P ribosome biogenesis and assembly
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
28 wdV10416
765bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q9VY06 (57%/82)
Cluster: CG9514-PA; n=2; Drosophila melanogaster|Rep: CG9514-PA - Drosophila melanogaster (Fruit fly)
GO:0006118 P electron transport
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F FAD binding
GO:0004344 F glucose dehydrogenase (acceptor) activity
GO:0006006 P glucose metabolic process
GO:0006066 P alcohol metabolic process
GO:0008364 P pupal chitin-based cuticle development
GO:0008430 F selenium binding
GO:0016491 F oxidoreductase activity
GO:0046693 P sperm storage
29 wdV10417
839bp
chromo12/Bm_scaf6
8265254bp
UniRef50_Q77NK4 (37%/45)
Cluster: Bcl-2 homolog; n=3; Cercopithecine herpesvirus 17|Rep: Bcl-2 homolog - Rhesus monkey rhadinovirus H26-95
GO:0042981 P regulation of apoptosis
30 wdV10418
753bp
chromo21/Bm_scaf7
8313734bp
UniRef50_UPI00006CFD8F (95%/89)
Cluster: Ubiquitin family protein; n=1; Tetrahymena thermophila SB210|Rep: Ubiquitin family protein - Tetrahymena thermophila SB210
next from show/327

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).