SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2019/10/06
 
next from show/866
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1 wdS00001
620bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q7Q155 (97%/82)
Cluster: ENSANGP00000022332; n=6; Endopterygota|Rep: ENSANGP00000022332 - Anopheles gambiae str. PEST
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein amino acid phosphorylation
GO:0004702 F receptor signaling protein serine/threonine kinase activity
GO:0007015 P actin filament organization
GO:0004713 F protein-tyrosine kinase activity
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0016301 F kinase activity
GO:0016740 F transferase activity
2 wdS00002
700bp
chromo24/Bm_scaf107
1152854bp
UniRef50_A2FND9 (31%/58)
Cluster: Putative uncharacterized protein; n=1; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3
GO:0004026 F alcohol O-acetyltransferase activity
GO:0005811 C lipid particle
GO:0006066 P alcohol metabolic process
GO:0006113 P fermentation
GO:0006631 P fatty acid metabolic process
GO:0008415 F acyltransferase activity
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0030636 P acetate derivative biosynthetic process
3 wdS00003
632bp
chromo10/Bm_scaf70
1945803bp
UniRef50_UPI00015B567B (71%/106)
Cluster: PREDICTED: similar to ribosomal protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ribosomal protein L23Ae - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
4 wdS00004
783bp
chromo10/Bm_scaf44
3277875bp
UniRef50_O01382 (70%/85)
Cluster: Caspase precursor (EC 3.4.22.-) (drICE) [Contains: Caspase subunit p21; Caspase subunit p12]; n=13; Endopterygota|Rep: Caspase precursor (EC 3.4.22.-) (drICE) [Contains: Caspase subunit p21; Caspase subunit p12] - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0006915 P apoptosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010165 P response to X-ray
GO:0012501 P programmed cell death
GO:0016787 F hydrolase activity
GO:0030693 F caspase activity
GO:0046668 P regulation of retinal programmed cell death
GO:0048515 P spermatid differentiation
5 wdS00005
439bp
chromo7/Bm_scaf15
6423983bp
UniRef50_UPI0000D56792 (60%/80)
Cluster: PREDICTED: similar to CCR4-NOT transcription complex, subunit 2 isoform b; n=2; Endopterygota|Rep: PREDICTED: similar to CCR4-NOT transcription complex, subunit 2 isoform b - Tribolium castaneum
GO:0005634 C nucleus
GO:0030528 F transcription regulator activity
GO:0045449 P regulation of transcription
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0005737 C cytoplasm
GO:0006358 P regulation of global transcription from RNA polymerase II promoter
GO:0016455 F RNA polymerase II transcription mediator activity
6 wdS00006
654bp
chromo11/Bm_scaf24
5118123bp
UniRef50_P43332 (84%/84)
Cluster: U1 small nuclear ribonucleoprotein A; n=32; Eumetazoa|Rep: U1 small nuclear ribonucleoprotein A - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosome
GO:0006397 P mRNA processing
GO:0007539 P primary sex determination, soma
GO:0008380 P RNA splicing
GO:0019099 P female germ-line sex determination
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0000398 P nuclear mRNA splicing, via spliceosome
GO:0005685 C snRNP U1
7 wdS00007
575bp
chromo24/Bm_scaf43
3469235bp
UniRef50_Q9P021 (68%/94)
Cluster: Cysteine-rich PDZ-binding protein; n=35; Eukaryota|Rep: Cysteine-rich PDZ-binding protein - Homo sapiens (Human)
8 wdS00008
421bp
chromo7/Bm_scaf90
1464009bp
UniRef50_Q9VI82 (46%/49)
Cluster: Nucleolar complex protein 3 homolog; n=2; Sophophora|Rep: Nucleolar complex protein 3 homolog - Drosophila melanogaster (Fruit fly)
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
9 wdS00009
689bp
chromo6/Bm_scaf111
965032bp
UniRef50_UPI0000E45ED1 (86%/59)
Cluster: PREDICTED: similar to LOC564406 protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to LOC564406 protein - Strongylocentrotus purpuratus
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization and biogenesis (sensu Eukaryota)
10 wdS00010
717bp
chromo17/Bm_scaf33
4426693bp
UniRef50_UPI00015B5FD2 (92%/69)
Cluster: PREDICTED: similar to endopeptidase inhibitor-like; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to endopeptidase inhibitor-like - Nasonia vitripennis
GO:0005515 F protein binding
11 wdS00011
754bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q17II7 (67%/106)
Cluster: DEAD box ATP-dependent RNA helicase; n=1; Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase - Aedes aegypti (Yellowfever mosquito)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F ATP-dependent helicase activity
GO:0016787 F hydrolase activity
GO:0000381 P regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0016246 P RNA interference
GO:0019730 P antimicrobial humoral response
GO:0031047 P RNA-mediated gene silencing
12 wdS00012
730bp
chromo6/Bm_scaf11
6993210bp
UniRef50_O17445 (68%/86)
Cluster: 60S ribosomal protein L15; n=132; Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
13 wdS00013
760bp
chromo1/Bm_scaf23
5097954bp
UniRef50_Q8D221 (31%/79)
Cluster: YfiO protein; n=1; Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis|Rep: YfiO protein - Wigglesworthia glossinidia brevipalpis
GO:0016740 F transferase activity
GO:0005488 F binding
14 wdS00014
589bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q29JS7 (60%/85)
Cluster: GA16547-PA; n=1; Drosophila pseudoobscura|Rep: GA16547-PA - Drosophila pseudoobscura (Fruit fly)
15 wdS00015
568bp
chromo25/Bm_scaf32
4385969bp
UniRef50_Q9VHD2 (82%/85)
Cluster: Probable maleylacetoacetate isomerase 2; n=6; Coelomata|Rep: Probable maleylacetoacetate isomerase 2 - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016034 F maleylacetoacetate isomerase activity
GO:0016853 F isomerase activity
16 wdS00016
511bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P08570 (85%/57)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit (sensu Eukaryota)
17 wdS00017
641bp
chromo2/Bm_scaf27
4962828bp
UniRef50_Q9BX68 (85%/34)
Cluster: Histidine triad nucleotide-binding protein 2; n=61; cellular organisms|Rep: Histidine triad nucleotide-binding protein 2 - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0016787 F hydrolase activity
GO:0016301 F kinase activity
18 wdS00018
652bp
chromo19/Bm_scaf100
1353457bp
UniRef50_Q16KY0 (35%/62)
Cluster: Cytochrome B561; n=4; Culicidae|Rep: Cytochrome B561 - Aedes aegypti (Yellowfever mosquito)
GO:0006118 P electron transport
GO:0016021 C integral to membrane
GO:0002119 P larval development (sensu Nematoda)
GO:0005515 F protein binding
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040010 P positive regulation of growth rate
GO:0040017 P positive regulation of locomotion
GO:0046872 F metal ion binding
19 wdS00019
652bp
chromo22/Bm_scaf18
5904300bp
UniRef50_A7RKZ0 (79%/24)
Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
GO:0000103 P sulfate assimilation
GO:0000166 F nucleotide binding
GO:0001501 P skeletal development
GO:0003824 F catalytic activity
GO:0004020 F adenylylsulfate kinase activity
GO:0004781 F sulfate adenylyltransferase (ATP) activity
GO:0005524 F ATP binding
GO:0006139 P nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0016779 F nucleotidyltransferase activity
GO:0050428 P 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process
20 wdS00020
722bp
chromo20/Bm_scaf79
1594848bp
UniRef50_Q16822 (64%/97)
Cluster: Phosphoenolpyruvate carboxykinase [GTP], mitochondrial precursor; n=571; cellular organisms|Rep: Phosphoenolpyruvate carboxykinase [GTP], mitochondrial precursor - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0004611 F phosphoenolpyruvate carboxykinase activity
GO:0004613 F phosphoenolpyruvate carboxykinase (GTP) activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006006 P glucose metabolic process
GO:0006094 P gluconeogenesis
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0017076 F purine nucleotide binding
GO:0030145 F manganese ion binding
GO:0005737 C cytoplasm
21 wdS00021
562bp
chromo3/Bm_scaf63
2158332bp
UniRef50_Q9VY78 (91%/85)
Cluster: CG10997-PA; n=8; Endopterygota|Rep: CG10997-PA - Drosophila melanogaster (Fruit fly)
22 wdS00022
509bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P42677 (85%/82)
Cluster: 40S ribosomal protein S27; n=74; Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell proliferation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
23 wdS00023
679bp
chromo16/Bm_scaf4
9119588bp
UniRef50_UPI0000D564FA (64%/25)
Cluster: PREDICTED: similar to CG13760-PB; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13760-PB - Tribolium castaneum
24 wdS00024
557bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q9WR81 (82%/87)
Cluster: Polyprotein; n=31; root|Rep: Polyprotein - Bovine viral diarrhea virus 2 (BVDV-2)
GO:0004252 F serine-type endopeptidase activity
GO:0006464 P protein modification process
GO:0006508 P proteolysis
GO:0016032 P viral reproduction
GO:0019082 P viral protein processing
25 wdS00025
774bp
chromo24/Bm_scaf107
1152854bp
UniRef50_Q9VZS3 (91%/61)
Cluster: Protein translation factor SUI1 homolog; n=11; Bilateria|Rep: Protein translation factor SUI1 homolog - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0005737 C cytoplasm
GO:0006950 P response to stress
GO:0008135 F translation factor activity, nucleic acid binding
26 wdS00026
700bp
chromo24/Bm_scaf107
1152854bp
UniRef50_Q9VZS3 (85%/49)
Cluster: Protein translation factor SUI1 homolog; n=11; Bilateria|Rep: Protein translation factor SUI1 homolog - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
27 wdS00027
778bp
chromo18/Bm_scaf2
11281751bp
(no hit)
28 wdS00028
470bp
chromo18/Bm_scaf2
11281751bp
UniRef50_A3S418 (57%/21)
Cluster: Putative uncharacterized protein; n=1; Prochlorococcus marinus str. MIT 9211|Rep: Putative uncharacterized protein - Prochlorococcus marinus str. MIT 9211
29 wdS00029
687bp
chromo13/Bm_scaf104
1287959bp
UniRef50_Q17AS2 (27%/62)
Cluster: Putative uncharacterized protein; n=2; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0015520 F tetracycline:hydrogen antiporter activity
GO:0015904 P tetracycline transport
GO:0016021 C integral to membrane
GO:0046677 P response to antibiotic
30 wdS00030
616bp
chromo11/Bm_scaf59
2341090bp
UniRef50_UPI0001553357 (45%/33)
Cluster: PREDICTED: similar to novel member of the keratin associated protein 4 (Krtap4) family; n=1; Mus musculus|Rep: PREDICTED: similar to novel member of the keratin associated protein 4 (Krtap4) family - Mus musculus
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005622 C intracellular
GO:0005634 C nucleus
GO:0006350 P transcription
GO:0006353 P transcription termination
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
next from show/866

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).