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Last updated: 2022/11/18
NameA_TrvaFAMAMG_TR9836c5_g1_i1
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_small_subunit_processome_component_20_homolog_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
Transcript
Level
FPKM:1.89 TPM:1.85
ORF EntryO_TrvaFAMAMG10145_5prime_partial:A_TrvaFAMAMG_TR9836c5_g1_i1
Sequence
(Nucleotide)
TAAACGACTTGTACACTGAGTATAGTAGCATAACTGAAAGACCTGATTTGTATAACTATA
GAAACTTAGTATTAAAAGTTATGACTAACTGCATTCAAGCATGCGAGGCTAGAAATCGTG
ATGTGGTAGTCTTATTTTTGAACTTTATTGATGAAGAATATAGAAAAAATGACAACACTA
ATGCTCTTAAAATAGATGTTGCAAAACATCCCGATAAAATAGCCGTTGAAAATGAAATAC
AACAAGACATTGAAATAGATACAGAAACTGAAAAAGAGATAGATGATTTACTAGAACAAA
TAGATGAACAAAAAGATTCAGTTTCAGGAAAAATTATATTCAAAACTCTAATAAACATAA
TGCAAGTGTTAGCGCAGTTCAAAAACCCGAGAGCTTTGCACAAAGAACCAATATTTTGGG
AATTATATATGGAGTTTTTGAAGCACAAAAACCCCGGTCTACAAAAGTATGCCTTAGATT
GCGTCCTTAATTACAAAAACAAAAGTGTCACTACATATAAAACCAATTTGTATAATTTAG
TCGATGAGAAAAAATTTAAAGATGAATTGACTCAGTTTAAAATCACTGAAGATTCTCAAA
CTATACATGCTGAAGACAGAGAGCATGTGATTCCGATTATATTAAGGATACTCTACGGAA
AAATGACCAGTAAACAAACTGGGGATAAGAAAAGCGGTGGACAGACCAGAAGATCTATGG
TTATGAGATATTTAGCTGGATGTAACGAAAATGAACTCAGAATGTTCATTGAAATGGCTT
TCAGTCACTTCAAAAAATATATGACTATGAAACCTAAAGAGATATTCGAAAGTATTCATA
ATAACCTTGATTTAAAATCCATTACCAGTCCTGGGAAGTTACACAGCATTTTAAATTTGT
TTGAGGTTGTACGCGAATATTTCGGAGGTTATATGAAAAGTGAACTTCTATCTGAATTGT
ATAAAATATTCTACGCTGTATCTTCGTCTTTTGCTGCTGTTTTATCGCAATCTGACAAAG
TTCATGTTGGCTATGTGAAAGTTATGAAAAATCTTCGAACTTTAGCTCTTGTGACCCTTA
AGAAACTTTTCGAACAGTTAGACAAATATCCCTGGAGTAAAGATGAGTTATACGTGATAT
TTGAAACTTTACTTTGGCCTTTGATACCTAAACTACATATTGAGGGCATACATAGTCCCA
CAGCCCTTTTAAAGCTTCTACAGGTTTGGTGCCAAAATCCACGATACTATATTTTGTTAG
TAACTTCGAAAGATAACTCTACGTCGTTAGAAGCAATGTTTAAACTTCTATTGGCTCCAA
AAACAAGCCCTGTCGTTGTAAACATGATTTTGGACATGATTGAAAAATTAATTACTTTAA
CTGAGAATGAGGAAGACAAAGAGTTGGCTCCACTAGAATCTTTCAGTACTATATCCAGAA
TAGAACTAAATGTAAATGAAGTTTCTAACATTAATTATGGAAGCAAAATCTTGATACCAC
ACATCCCTAGTATATTGGAAGTAATGAAAAGACGTATGGCGAACTCAGCCAAATCAAACA
CAGTTAACAAAAGAGATCTTTTGATATTATCGCGAGTGACTGAATTAGTTGCGAACCCAG
AAATCTGTGATGAACTACTAAACTTGCTGTTGCCTATATTAGTAAAGAAAGTTTGCATGA
ACATGGCTGAAGATAATATGGAGCATGCAGTAACCACAATTATTAATCTGTTAGGACATA
GCACCAATCCTCAATGTTACATCAAACATATAGCTGTTCTTTTCAATAAAGTTAACCCAA
TTGATGTAAGAAAGTTGCTTATCAAATTACTATCATCTATAGCAGATGCTGCACCTAGTA
ACAAAGAAGTTCTAAAAAGAATAGCTAACATTGTTAGTGAAATGAACGCCTTTAATAAAC
GATGGATAGAACAGCCTGATTTTGAAAGAAGAATAGACGCTTATAAACAAATATACAAAC
TCGCAGATAACGATGAAATTGACATTGACCTCGCAATTCTTATCGTTAACAACTGCTTCT
ATTTCATACGGACGGAGAAAGACATTGGTTTGAGAGACTCCGCTGGGCTGTGTATGAAAA
AGATACTACCGAAATTGCTTATGAAGTATAGATCGGCAAACGAAGGACAATTTTTAGTTC
GTGATACAGTCCTGTCTTTAATATCGACTGGAATAAGAGATACAAAACACGAATTGGTTC
GCAACGAATCAATCGCTCTGCTCGGAGAGTTAGCCCGTGAATGTCTTGATGCTGATGTCG
TGTTGTCAGATTTAGCTCCATTAACAAACAAAGAGGACGTGGAAGTTGATTTCTTTGAGA
ATATGTGTCATTTACAAATGCACAGACGCGTCAGAGCCTTGTTGAAGTTCTGCAAAGTCG
CGAAGAAGGTTAAAAAATGTCCGGCGCCTAGGACTTTAACTAATTTCATATTGCCACTAG
CAACGACCTATCTTTGTGACGATAATTACACAGACAAAAATACCCTTATAGATGCAGCGA
TAGATGTTGTTTCAACGTGTTGTCGACTTTTACCTTGGTATCACTACGAAGTGATTTTAA
AATTATATTTAAACAAAATGCGACATTCAACTGAACATCAGAAACAGTTGACTCGGATCA
TCATTGGAATTATCGATGCCTTTCATTTCGACTTTTCAAAGGCAAAAAAATATTGAACTT
CCTAAAGCGCTAGTAATGAATATTAAGAATAAAGTGCGCATTGAAGACGCGAAAAAGCAA
GTTGAAGTCAATAAAGACGAAGACAATGAAATTGATGAAACAGAAACTGGTTTAGAAAAC
GAACATAAAACTGATGAGAATGATATAGAAATGGAATTGAAAGCTGCTGATGATGAAGTT
GATAATGAAGAAGTTCCTAAAGAAATATCCAGTGCACCTGCTTTTGAAAGAATCACGAGC
GTATCACCATCGGTTGCTAAGAGAATCATCAAATCATTGACATCTGGACTACTGCCTCAG
TTGAATAGGTCCATAGGTAAAATGACAGATCACGAAGAATCTCATAAAGTGAATAGGCGT
CGAAATGGCATCGAAAGACAAGAGGAAGACATGCTAAGGGTTCCTATAGCTCTAGCGCTT
GTTAAACTATTACAGAGATTACCTGGTGCTTTGTTGGACAATCAGTTACCTGGCATCATC
ATAAAACTGTGTTCGTTCCTAAAATCTCCTCTAAAACAAGTCCGCATAGCAGCGCGTGAT
ATCGTCAAAAAAGTCATGATCACAGTCGGTACAGATTACTTAGGCGTTTTCTTGGAGCAT
CTAACTCTCTTATTAACAAGAGGATTCCAAGTACACGTATTAGTCGCAACAGTTCATACC
GTACTTGACGCTTTGAAAGGGACATTTAAACCGGGCGATATAAACAAAAATCTACAGTAC
ATTCTCGATGTTTGCACCAATGATTTATTTGGGGCTTTGGCTGAAGAAAAAGAAGTCGAC
AAATTGCATTATAAGACCCCAGAAGCGAAACCTAGTAAAAAGAGCTATGTCACCTTAATG
ATTGTCGCTGAGAACATAACAGAGAAATGCTTGATCAACCTCCTAATGCCGTTTAAAGAG
GTTTTAGAAAAGCACCATTCCAAAAAGATCGTGTTAAAAGTCCAAGAAGCGTTAATGCAC
ATCACTAGCGGTCTAGTCGCGAATAAATTTATCGATATCGAATCTCTATTCATTTTCTTA
CACGGAATAGCATCGGACAGCATTCCGCAGTTCGTTTTAGGAGCCCCAAGAAGGGAGATA
ACAGACGCTCAAAGAGAGAAAATGCTTAGAGCGAAACCTGACTGCTTTATCGTACCAGAA
ATTCCGAAAAGAAATAAAGAGACTCAAGCGAAGAATGTTAAAGTTTCTGGTAAAGCCAAC
GCTCACGTTTTAGTTGAATTCAGTTTGAATATACTGCATGTTATATTAAAAAGAGAAAAA
GTACCAAGAGTCGAATGCAAAGCGTTCGTAGATCCCTTAATTCCTCTCTTAGTAGACGCG
ATAAAAAGCGACCACGTCAAAGTGACGACTGTTGCTTTGAAATGTATAGCCACGTTGTGG
ACTATTAGAGTTAGCACGCCTACACTGGAGGAAATGGTTCAAGATATAGTGAAAACTGTT
TTTACGATATTACACAAGTACGCGACGTTTGAAATCAGCAAGCAGAATGATAATTATAAT
TTAGTTAGGACTGCTTTTAAGGCAGTAACAGTGTTAATTCGTAACGTAAAATACTATAAA
TTGGAAGTAGAACAATTGAAAACACTACTTTTGTACGCAGAAGAGGATTGTCAAAACGAT
GAAAAACAAGCGAACTCGTTTTCTTTGTTGAAAGCTATTTTGGAAGCTAAATTAGTTTCA
CCGGAATTACACGAAGTTATGGAGAAGATATCTAAGATTTGTATATTGAGTGTTTCGGCG
AAATCTAGAGAGGAGGCACGCTTAATATTCGCTAACTACATAACGACATACGCTCCAGAA
CGTCGTTTAGCTAAATACGTGGATTTTTTCGTAACACAACTCAATTTTGAATTGCAACAC
GGAAGGGAATCGTCTTTGAAATTCTTGGAGATGATCATAAATAAATTGGCTGAGCCTCAA
CTAGCGAAGTTCTCTGATCATTTGCTATTAACTCTCGGCGCGTGTATGGTGAACGATCCA
GCTCCCGAATGTCGAGCAATGGCCGCCGCCTGCATCGAAACTATGATCGCAAGACTTACT
AACATGGAACGGAATAAACTGTTCGATTTAATTGTGACGTTCTTTCAGGATAACCAGCCC
GTCCATTTTGAATTAGCAGCGCAACTAACCACCCGTTTTGTAAACGTCGAAAAGGAAGAT
TTCAAACATCGCCTCACGACAATTCTTCCCTTAATCAACAGCAAAATGCTTCTTCTCAGT
ACCGAAGTAACAGAAGGTCGTTTCGTTAAAATAAAACTGAACCAATCCGACCAAAAAACG
GACGAAGAAAAACAAAAAGAGAAAGACCACAGTCTCATACAAATACTCAATTTAACCGAG
AAGATTACGTTACATTGCGCGCCGAGTATCAAGAATGAGAAGTATATTAACGAATTTGAT
GAGATAGGGCAGCAATGTAAAGCGTTTTTGGCCTACCCTCATGCGTGGGTTCGGTTGAAA
TCGGCTAATATTTTAGGGCAGATTTTGTTGGCGGTCGATGTGAGTGAGATAGATGATATA
ATTATGAATAAGAAAGAAAGTGACAGAGGATTTATTTATTATGATGTAGAGGAAACTTTG
AGGAGTTTGATCTTGGATTTGTGCGCGCAATATACACCTACTGTGTCTAAAGAAATGGCT
GAACAGGTAACAGCAGTATTATTCCAAATACTAAAAATAGTTCAGTCATCATCCAGTTTT
AAATTGACAAAGAAAATAGACAGAGAAAGCGAAGAAACGGAAAGTGGAGGCAAACTTAAC
ATCAGATGGATTCTATACAAGTTACGGAGGGCTGTCAATGTTGAAGTGGCTAGGGCGCCT
ACTTCTATTAATATTAGAACATCAGTATTCGCCATGTGGATACACGTGATAGGAGGTTTA
GATGTTAATGACGTCACTAATGTAGTAGACATCCTCCTCCCGCCTATAGTCCGGGAGCTC
TCGACCGGCGACGCGAATACACCCGCGACGGCTCCCAAGCAATTGGCAAGGAGGCTCGCT
AAAAAGTTTAGAAAGAAAATAGGAGATATAGAATATAGTAAATTAGCTGCTGAGGCGCAA
ACTAAGTTGAATATTAAGAGGGCTGAGAGGAAAAAGTTATTACTACAAGAAAAAGTTAAC
AACCCCGAAAAGGCGGCCAAAAGGAAACTTCAAGTGAAAGAAAAGAAAAAACAAGCAAAG
AAAGTTAAGTTAGACATGTTGCACGGGAAAAGACCGCGACCCAAGAAAAGAAAGGCAGAA
GATTTTGACTTAGAAGAAGAATTACTAAACGATGATTGAAAAGATTAATCTTTAAGTTTT
TTTAACCCTTTCAGGACAATAAG
(6023 bp)

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