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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp12019_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_pyruvate_carboxylase,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:27.54 TPM:27.71
ORF EntryO_BomoSK10038_3prime_partial:A_BomoSK_comp12019_c0_seq1
Sequence
(Nucleotide)
CCAGCATGGCGGCCACGCCCGCGCCGCTCGTGTCGTGCGTGTGCACGTGCAGCGGGACGT
GCGGGTGCGCCGCGCGGATGGCGCCTATCAGCAACTTCGCAGCCTGGGGCTTCAGCAGTC
CGGCCATGTCTTTGATAGCGAGCACGTGAGTTCCGGCCTTCACCAGATCGTCGGCCAGCT
TCGTGTAATACTTCAGGTCGTATTTAGTTTTGCTGGGGTCCGAAACGTCGCCCGTGTATG
AGATGGCGGCCTCGACGACTCCGCCTGCCTTCGCGGCTGCCTCCATGCCCAGTACCAAGT
TCGGCAGGTAGTTCAGCGAATCGAAAACTCGGAAGATGTCCATTCCTGCTTGGACGGCCA
TGTCGCAGAACTTGAAAACAACGTTGTCGGGATAGTTGGTGTAACCGACCGCGTTGGCGC
CGCGGAGCAACATCTGGAACGGAATGTTCGGGATCAGCTGCCTCATGTCGTGGAGACGCT
CCCACGGACACTCGTGGAGGAATCTCAAGGCCACGTCGAATGTAGCTCCTCCCCAGTTCT
CGAGCGAGTACAGGTTGTTGAAGTTGTGCGCTACGTAGGGCGAGACGGCGAGCAGGTCGT
GGGTCCGCACCCTGGTGGCCAGCAGCGACTGGTGCGCGTCCCGGAACGTCGTGTCCATCA
GGAGTAGACCCTTGTGCTGCCGGACCGCTTTGGCGAAGGCCTCGGGGCCACCCTCGTCGA
GTATTTGTTTGTAGCCCTTCGGCGGTTGGACGGCTGTGTTTTCTCCGGTTAATTCCTGTC
TTTTAATAGCCTCTGGGGAAAGGTCCAGCGGCACTTGAGGTATGTAGGGCTTGACGTCAG
ATGGGGGTATTTTGGTGGCAAGAGGAGTGGCCGGCCCGTTGACCAGCACATAGCCAAGAT
AGTTGAGGATCTTCTGCGCTCTGTTCTGTGAGGCTTTAAACATGAACAGTTGCGGATTTT
CGTCTATGAAGTACGTGTCGACCGAACCGTTTAGGAATTTCTGGTTCTCGAGCACGTTGA
GTAAGAAGGGGATGTTGGTCTTGACGCCTCGGATGCGGAACTCGCGGAGGGCTCTATTCA
TTTTGGCCGCCGACGAGGGTAGGTCGTGAGCGTGAGAGATCACTTTGACAAGTAAAGAGT
CGTAGTACGGAGAGATGACGGCGCCGGCGTACGTGGAGGCTGAGTCGAGACGGATTCCCA
TCCCTTCACCGGATCTGAACACCTCGATCCTGCCCGTACTGGGCTGGAAGTTATTGGCCG
GATCTTCGGTAGTAACACGACATTGTATCGCGTATCCCTGTGCTTGTATTTTATCCTGCG
TCAACCCTAGTTCGGGCAGGGTCATCCCCTCGGCGATACGTATCTGTGACTGTACTAGGT
CGATACCTGTGACTTCTTCTGTTATGGTATGCTCTACTTGCAATCTGGCGTTGACCTCGA
TGAAGTAGAAGTTCCCCTTGTCGTCGAGCAGGAACTCGACCGTGCCGGCGTTCTCGTAGC
CGACGTGCCGCGCCAGATGTGTGGCGCACTCGACCATTTTCTGACGAATCTTAGGGTCCA
GTTTCGGTGCAGGAGCAATTTCGACGACTTTCTGATGTCTCCTCTGTACTGAACAATCCC
GTTCGTATAAATGCACAACGTTGCCGGCTTTGTCGCCCAACAACTGCACTTCGATGTGCC
GGGGTCGTTCGATGAATCGTTCGATAAACATGGAACCGTTGCCGAAAGCGCCGAGAGCTT
CTGAAGAAGCTCGTTCGAAAGCCGAAGGCACTTCTTCCATCTTACGGACCACCCTCATAC
CACGACCGCCGCCTCCGTACGCAGCCTTTAAGATAACCGGAAGACCGTGACTTTTGCAGA
ACTCCACAGCCTCCTCTTTCGTTGTGACCGGACCATCGGTTCCGGGAACAATCGGCACCT
TTGCTTCGATGGCAGCTTTTCTGGCGGCTACTTTGTCTCCCATCTGCTGCACGACCTTCG
GCGAGGGCCCGATGAACCGCAGACCGGCATTAATGATGGCCTGGGCGAAATCGGCCCTTT
CAGATAAAAGACCGTAGCCGGGATGTACGGCGTCAACGTCGTTCTCCTTCGCAACCCTGA
TGATCTCCGGGATGCTGAGGTAGGCCTCGACTGGTGGCAGACCTTTTCCGACTATATACG
ATTCGTCGGCTTTTTGTCTGTGCATTTGCAGTTTGTCTTGTTCGCTGTAAATAGCCACAG
AACGGATGCCTAGTTCCGTGCAAGCTCGGAACACACGTATGGCGATTTCGCCGCGATTCG
CAACAAGAACGCTTCTGATTGGTTTGTATTCCACTATCTTCGAGTCCGTAGCAGCTGTCC
GAGTTTTGGCCGAGCTCCATGCCTGGAATTGCGACGCTGTGGCGCGTAACGCGAATCTTG
CCTTTAGTATTTGCATTTTTATTTATACTAGTGAACTTATTAATTGATAAACTAAATAAG
TACAAACTTAATAATTCTATTTAATATCCTAATAACACAGTTTATTTCATTTTAGTGATT
CGTTACGTTTTTTTTTTTTTTTTTACGAAAAAAAAGTTTTTTTTTATTTTTGTGTTTTTT
TCAACCTTTTTTGTTGGTGGGTGTTTTCCCCCATT
(2615 bp)

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