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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c10114_g1_i1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
Transcript
Level		FPKM:97.15 TPM:50.54
ORF EntryO_BomoMSG2116_3prime_partial:A_BomoMSG_c10114_g1_i1
Sequence
(Nucleotide)
TTCCGATCTGTGGGTTCTGCAGTGGCAACTCCAACCCCAGCCTTTTAATATGGCCGCTAC
AGGCAAGAAGTCAAAGAAGGCAAAATGGATCAAAGCCGACATCACAAGCATTATAGCAGA
ACCGACCACAATCGCAACTACCAACAATTGGGCGAACGCTGCAGAAGATGAAACGGAAAA
TTTTGGATATGCATCGCATACACGGGCACCAGTTGTACTGCCTTCAGCTTCTCGTGCAGC
ACGAGGAGGCTTGGCAGTTGATGATGAGTCAATACCACATCGCCCCCCATTTATTGCACA
CATCTCTAATCTGCCTTATGATGTTGAAGAAAGTGCTATTGCAGAGTTATTTGCTGACCT
TAAGGTTACCAACTTAAGACTTCCAAGAGAGGGTGACAGACTCAAAGGTCATGGATATGT
TGATTTTGAAGACAGAGAAAATTTAATTGAAGCTCTCAATATGCCAGACTTGACAATAGG
TGGCAGGAGAGTACGAATTGAGGTGTCTACTCCAGATGACCGTCGAATGGGACGAAGTGG
ACGCTCTGATAGAGATAGGGACTATGACCCTGAGCGTACAATGGGTGACTGGCGCTCCGG
ACCCCGCGCTGTACCCGACGCGCCCGGCCGCCCTCGTCCTCCCAATGACAGAGAACGAGA
TCGGGATCGGGATCGCGAAAGAGACTCGAGTGCAGATAACCGTCCGGGAGCCTGGCGCGA
CGCCGAGCGAGCCCCCGAGCCCGCGCGGGCCCCCTACGGCGGGAGGGACTCCTTCGGACG
TGACCGCTATGGAGAGGATAGAGGTAGAGATCGGGGTTATGGTGGACGAGATGGATTCCG
TGCTGCACCAGACCGTGAAGGAGGATTCAGCAGAGATAGTAGAGGATTCGGCGGCAGAGG
TTTTGGCGATCGTGATCGTGACCGGGACCCACCTCCAAGAGAAGACACAAAACCTCGTGA
ACGTCCTAAGTTGAATTTGTTACCGCGCACTGTGCCTCGCGAGACCGAAGCCCCCACCAA
GCCCGCCGACGGAGCGCCCCTGGAGGAAAAACAAGAGAAACAGGCTCCGAAGCCGGTGCC
TGCTGAAAAAGTGTTTGGCGGCGCTAAACCTGTTGACACTGCTGCTAAGGAAAGAGAAAT
TGAAGAGCGTCTACGAAAACAGGAAGAAGAAGCCAGACGCGTTGCTGAAGAAAAAGAACG
TTGGGGGGGACGTAGAAATGATCACTCTGGAGATCGTCGTGGAGGTGCTAGAAGAGACGA
TCGCGGCAGAGATTCGCGAAGCTTCAACAGGGAGCGACGAGATTATTCTAAGGACGACAA
GGATCGGCGCGACGACCGAGAAAAAAGGGACTACAGGGACGATAGAGACAGGCGCGACTA
CAACAGGGACAGTAGAGATCGGCGCGATCCCAAAGACGAGAGAGAACGCAGAGACTACAC
CCCCGACCGACGGGACCCCTCGCCCGCCTCGCCAGCGCGCAGGAGAGATTCCGTAGAGCG
CGATCAAGAAAGAAACGGACGACCCAGTCGTTCACGTGATCGACGCGACGACACTGACGA
GAAACCACTGCCCAAATTAAAAGAACAAGAAAAACCCAATTTCGTTGCATCCAACAAGTT
TAGCTTCCTTGAAGACGCCGACGACGCTGCATCTGAATAACACTCGTATAGACGTGTGAA
ATATTTTGTGTCCGTTCTGCAAGTGACCAGAGTGTAAAGTGTAAATTTATCGAGTGACTG
ACGCACGACGGAACTGTACGTGGCACCGAGACGATCGTTTACATTGTGCTATGTGATATA
GAACTCGACTAATCATAGTGCGGTGTGGTTTATCATATGTGTATATTAATTAGGGTTTGT
TACATGCTCACGCAGCTTCGAGGTCTGCCCCAGTCTTTACTGTAGTGACCTGATATTCGA
TAAAATTATATCATCGACAAAAGGTTGTTTTTAAATCTGTGCAGTTGCAACATTAAAGAC
TGGGGCTCTCATATTTGCAACCATTTTATACTAATTGGTGTAAATTCACGATGAGTTTTT
TTACAAATATAGATGAAGCTGATTAATTAAAAATCATTGGAATCCGAAAGTTCCATTTCC
TCAATTTTACAATAAAACAGGTGCTGCCTCTTTGTCGTGTTTTGTTTTCTTGCAAATTTA
TCATGTATTTGATTTCTTTTCGAGTAGGAGTAATATTATTATGAATTGAGTGTGAAACTC
AACAATACACCACTATTATTATGATTATTATTATTATTTTATAGGAATCTTTCTCATTTC
TTTGTTTCCGTTGTGCTAAAGGGATCTATTTATAAACCGCGATATACGGGGTATACCCGC
CACAGAATCGTGATGAACAAACGTCTTCTTGCGATACAACACATTTTGTTAATTTAGCAC
TCGTATTAATGTTGTCATATTATTATTTACTATGCTTGAAGCATCATTTAAATAGTAATT
GTAATTAAAACTGATGTGAAAATTTTAAAAAAAAAAAAAAAAAAAA
(2506 bp)

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