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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp37952_c0_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_pre-mRNA-processing_factor_17_[Plutella_xylostella]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000386 F second spliceosomal transesterification activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.40 TPM:0.31
ORF EntryO_BomoMG10009_complete:A_BomoMG_comp37952_c0_seq1
Sequence
(Nucleotide)
GGGTTGTCGTATAATTTAATCGTGTTCATTTTTGTTTAAGAACATTAAAATTATTGATGA
ATTGTGACATCATCATCACTGTACATACTTCAATATAAAATTTTAATTATTAACAAAAAT
GCTCAATATAAAAAAATACGGCAGTAGTTCAGAGGATGAAAGTGATGATACAGAAACAAA
CCAGTTCAGCAATGAAGCTCTCTTGACCCATCTTAAGCCTGTTGATCCGAGTTTGTCCGT
GGCCAAGACCATGCAAGTATGTGCTGCTCCAGCTGTGGTGCCTACGAATGAAGATGACAC
TAGAGTTTTAATACCAGCAAACGCAAAAGAGTTAACACACAATCCAAAGTATGAGGAGCT
GTTTGCACCCGCTTTCGGACCAGAGAATCCATTTCAAACACAGCAAATGAAGGCAACGAG
AAACATACTATCTGGCTATGTAGAATTGGCACATATTAGCGATTTTCAGTTTGAGAATCA
ACGAAGAACATTTACGAGTTATGGTTATGCTGTAGATCCTTCTACAAATATTGAGGAGCA
AGAAGGAGATGCTATAAATCTGCTATGATAGACCCTAAAGAAGATACAGAAGGCAAATCA
GTTTTTGAAACAATAAAAAAGCGACCCCTAGACAAAAAGAAGAGAACCAAAAATGACAAT
CCTGAAGACATTAATGGATTTCTAGGACCCTGGGGAGGTTTTGAAGGAGAACAGAGGATA
ATGAAACCGGAAGGTGATGAAGCAAAAGAATTAGAAGAGATTTTAGCTAAGAGACAGAAG
AAAGGAAAAGTTGACGATGATAAACCTTTGGAAGAGAGATCTATATTACACATTGACAAG
GTCACCGATTATCAGGGTCGGTCTTGGATCGAGGCGCCCCGAAGCGAAACACAACTGCGA
AGCGAGTCACCTCCCGACAAATGTTTCCTACCGAAGGCGCACATATTCACGTGGAAGGGT
CACACGAAGGGCGTGGCGGCGGCGCGCTGGTTCCCCTCGACGGCGCATCTCATGCTCTCC
GCCGGCATGGACTGCAGGGTCAAGATATGGGAGGTGTACGGTGACCGTCGCTGCATCAGA
ACGTACTTCGGGCACCGGCAGGCCGTCCGAGACGTCAACTTCAACAATTCCGGGAAACAG
TTTCTGTCGGCTGCGTACGACCGGTACATAAAGCTGTGGGACACGGAGTCGGGCGCGTGC
GTGTCCCGGTTCACGTCCCGGAAGGTGCCGTACTGCGCCAAGTTCCACCCGGACGCCGAC
AAGCAACACCTGTTCGTCGCCGGCACCTCCGACAAGAAGATCATATGCTGGGACGTTCGG
AGGTGCCGGTTCACGTCCCGGAAGGTGCCGTACTGCGCCAAGTTCCACCCGGACGCCGAC
AAGCAACACCTGTTCGTCGCCGGCACCTCCGACAAGAAGATCATATGCTGGGACGTTCGG
AGTGGCGAAATAGTCCAAGAGTACGACAGGCATCTCGGTGCGGTCAACACCATCACCTTC
GTCGATGAGAACAGGAGATTTGTGACCACATCCGACGACAAGAGTTTGCGGGTCTGGGAG
TGGGACATCCCGGTGGACATGAAGTACATCGCGGACCCGACGATGCACTCCCTGCCGGCC
GTCACCGCCGCGCCCAACGGCAAGTGGCTCGCGTGCCAGTCCATGGACAACAAGGTCATC
GTGTTCAGCGCGCTCAACCGCTTCAAGATGAACAGGAAGAAGACGTTCACCGGGCACATG
GTGGCCGGGTACGCCTGCACCGTCGACTTCTCCCCGGACATGAGTTATTTGGTGTCGGGT
GACGCGGACGGGAAATGCTACATTTGGGATTGGAAGACGACGAAGCTTTATAAGAAGTGG
AAAGCTCACGACGGAGTTTGCATAACCTCACTGTGGCACCCACATGAGCCCAGCAAGCTG
CTTACCGCGGGCTGGGACGGCGCCATCAAATACTGGGACTGAATAAAACAATCAAAACCA
TTAAAAAAA
(1989 bp)

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