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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9690_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_and_zinc_finger_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036266 C Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0046872 F metal ion binding
GO:0071630 P nuclear protein quality control by the ubiquitin-proteasome system
GO:0072671 P mitochondria-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:11.79 TPM:12.92
ORF EntryO_BomoFB10053_complete:A_BomoFB_comp9690_c0_seq1
Sequence
(Nucleotide)
ATGGCACTTTTCCAGTCACGCGCTCATGTTTAGAGGTCGAATGTTTCTGTGGTTCTGGAG
ACATTGCACTGCGCAGAATCTGTACACTTCGTACTCGAACGGTTTCTTCGGGAGATTTGA
GCCACAAAGAAAACAACGCTTCTCCGATGACTTCGCCTTTTCGGTATCGGTCATCTGAAG
GAACTTGTTGGTTTTAATCTTCTCCAATTGCTTCTCCTTGTCTCGTTGCCTCTTAGCTCG
TTTCTGTTGTAGCTTCCTCTCTTTCTCTTGTTCCAGAGTCTCGGGGGTCACCGGGCCGGG
AATGTGCGACTTAGCGTAATTGTATTTGTCTGGAAACTGAGCCTGGAACATTCTGAAGGC
GAGGCGTGTCTCCTGGTGTGGCGAGGCCGCGTACGGGGTCTGCAGCTGATTGTTCCTGAT
GCACGGATCTCCACCGGCAGTCAGGATCTCAGTGACCATATCTGGTTTCGCAGCAATGGC
GGCTTTGTGTAGCGCAGTGTTGCCATCGCTAGGATCGCGAGTGTTACAAGCCTCCGCCAG
ATTCTCTTCCTCCCAGCCTTCGAATATCGTCTCCAGTGATTTCAATTCATTTCCTATTAT
CATTTTCCACATCTTCTTAATAGGATTAGGAATCTTTTGACTGGGCTTGTTAAGAACAGC
GGGATCTTTTATCTTTTTCCTCCTATCAGTTTCATATTTCTCTTTTACTTCCTGCTTTAA
ATCTTCCTTCTCGCTCTCGCAGGGACTAGGTGTTGACCTATCTTGAATAGCACAATCGTT
TAGGACAACTTTTTTAGAATTAATAATAATCCCACTGGTTTTTTGTTCCGATAGTGTTTT
GATCCAACCTACAGGTGTCTCAGAGTCTATGAAGCAGGGACCTTCGTCTTCGCTCGACAT
CAACTGGGTTGGTAGCTCTCTAGGAGTGCGTTCTCTTGATTTTGCTCTATCAATAGTTTT
ACTAGGACTTTTCTTTGCTGTTTTCTTAATATTTTCATTACCAAGATCCAGTGTAGCTTT
ATTTGCTGGTTTAGCTGTCGATGTTATCAGTGCTTTTTGGAACAACTCCAACGAATCGTA
AACCTCTAGACTAGCAAGTGTAGAATGAACCCGCTGAACTTCTTTAAATGTAGGTTTTCT
AGTAGGGAAAGGTAGCACTCTAAGTCTTGGATCATCTTTCTTTATAGGGGAGTTCTTTCC
AAATATAGCAGCTTGATTTAAAGATCCTACAGCCCGATATAATATTAGAGAACAACCTTT
GAAGTCTTCTGTCCATTGACTTATAATATCTTGGATATGCTCTAGAAACTGCGCCTGATT
ATATCTTCTAAGGCTAGCACCGGCAGACCTCGCGTGTCCATGATGAGCATCTCTTGTAGC
CTGGGCTTGACCTTGCCCTCTCCTTGTGACATATGAATGAAATGTCTTGTGTAGAACTAT
AGTGCCACCACTGAAAACTGCCCCAGCAAATCTGCCACCCGAGACCATCAGGACTGCCCA
TCTTTGATAGCCTGGGATCAATAGCTGCTCCACACGTTCTACCCAGGCACTGCCATCACC
ATCCGTTGATAATTCTTCCTTCTTATGATGTAGGATACATCTATAAATACAGAAGACCTG
CCCATAATGATTAGTGAAGAACGCCTTGCAATGTCTTGTTGCTGCAGCAAATAGGTCACT
CGGAGGTCTCTTACTGTCCTCCACTTCTTCCTCAGACTCACTGCTTGATTCATCTTTCCG
AGAATTATACTGGCCAATGGATAATGGAGATTTTCCAAATAGTTTCCTCTTCAAGTTAAA
AGTGTGCCAGTGATGCTTATAATGAGCCGTTTGCTGCGCACGGGTCTCGAATGGACCCAC
TCCGCAACACGAACAACAATTACCATCAGAAGCACCATTTAAGGTTAAAGCATTAAGGCG
ACGCAAGACACTCTGTTCATCAATGACATTATGTGATTCTGTTATCATACATGCTGCCAC
ATGAACACCTTTTAGGAGTTTTTGAAATTCGTCGATCTCATAGACTTTCACGATTTTAGT
TTTTACTGCCTCGGGCTTCAGCGCCATTATCGGCTCAGATTGTTGATCTTGAAATATAAT
GTCCACGTTTTACATGTTATTACTTAAGTGATACACAATATAATACTTTAATAATTGTCT
TGGTTGCTTTACCACTCGATAATATTGTGCAACGAGATT
(2199 bp)

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