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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c26007_g1_i2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:10.95 TPM:8.40
ORF EntryO_BomoASG10013_complete:A_BomoASG_c26007_g1_i2
Sequence
(Nucleotide)
GAGGTAGCATTTTTTCACAACTTCGTAAAATGGCGGACGGCGATGTCGATATAGATTTGT
ACGCCGATGATATAGAATCCGATTTTAATCGCCAGGATGAATTTGCTGGCGAAAATGTGG
ATTTATATGACGACGTGATCTCAGCACCAGCTTCGAAGCCCGAGGACGGTGACGGTCCTC
CCATCATTGCTCCAAACCAGCATCCACCTGAGGAAACTAACGGCAACGCCTCATACCACG
GCCCGGTTCACGGACATCATGGCCGCCGTTTTCAACTTTACGTCGGCAACCTAACATGGT
GGGCAACGGACCAAGATATTGCGAACGCGATCTCGGATGTCGGTGTCTCCGATTTTCAAG
ATGTGAAGTTCTTTGAGAACAGAGCCAATGGTCAGTCCAAAGGATTCTGCGTTATATCTC
TCGGTTCAGATCAATCAGTCAGGATGGTGATGGAACGTCTTTCTAAGAAGGAGATACACG
GGCAACATCCAGTAGTTACATTGCCTACTAAACAGGCGTTGAATCAGTTTGAAAGTCAGT
CAAAGACCAGGTCGACGCCTCCTGGTCCCAATAATCCTGGAATGAGAGGACCCCATCCAG
GCGGGCCGCCTGGTCCTCATCCCGGAGAATTTTTTGGTGGGGGACCGAACGGTCCAGGTG
GGGGCGGACCTCGTATGATGCTCCCAGGTCCGGGTCCGCACCAGCTTCGTGGGCCGCCGC
CGCACCACATGGGCCCACACCAGGGCGGGCCGCATCCCATGCAACATCAGCCGCAGCCGC
ACCAGGCCCCGCCACACCGGCCCCCTATGCAGTTTGCGGGCCCTCCGCAGATGCAACGCG
CGCCGGGCCCGCGTCCGCCGCCTCCCGACTGGGCTGCGCGAGCGCCGCATCCTATGTCTC
AGCCCGCGCCTCATTATGGACCCCCCCATCATGGAATGCCGCATCAGATGCCACCACCTC
ATCCTCAACCCGGCGCACAGGGCATGCCGCCTCCGCACCAGTTGCCGCCGCACCAGCCGC
CGCGGGGACCGGCGCCCATGCCGCAGCATCCTGTAATACCTGGAGCTCCAGCACCACACG
TGAATCCTGCGTTCTTCAACCAGCAGCCACCGTCGCAGCCGCCGCCAATGCAGGCCCCGC
AACCTGGACCACCCGGTCCAGGTGCTCCGTACGGTCATCCAGCCCATGGAGCACCACCTC
CAGCACAAGGGCCTCCACCCGGGTCTAGACAACCGTACGGTCGGCCACCACAGAGCTATC
CGCCTCAAGCGGATCCGGCTCGTCCCCCGCACCACCCGGCACCCATGGTCCCACAGCACG
CGGCCTCCCTGGCGCCCCCCATGCCGGTCATCAGCGAGGCCGAGTTCGAAGAGGTGATGA
GCAGGAACCGCACCGTCTCCTCCAGTGCCATTGCTCGGGCTGTCAGTGACGCTGCCGCTG
GCGAGTACGCCTCCGCCATCGAGACGCTCGTTACCGCCATATCACTCATTAAACAGAGCA
AGGTGGCGCAAGACGACCGCTGCAAGATTCTGATCTCGTCGCTGCAAGACACGCTGCACG
GCGTCGAGACGAAGTCTTACAGCAGCGGCGAGCGGTCCCGCCGCTCCCGGTCCCGCGAGC
GCGAGCCGCGACACCACCGCGCCCCGCGCCGCCGCGACCGCTCTTCCAGCCGCTACCGGG
ACCGCAGCCGCGACCGAGAGGATAGGGACAGGTACAGGGAACGGTCGAGAGATCGCGACC
GCGAACGTGAACGTGACGCGTATTACAGGGATTACCGTGAGAGGGAGCGCGAGAGGTCTC
GCTCGAGGGATCGCGATCGTGCTGATCATTACAACAGGGGACACAGTCGTGAGGAGAGGG
CACGTAAATCTCCAGCTGAAGCGACAGCAGAGGGAACCACAGCCGAGGCCGGGTCGAAGA
GCCGCAGCACTGGAGCGCCGTACTACGACGAGCGGTACAGGGAGAGACGCGACAGAGACC
CGCCGCCCGCGGATCGAGATCGCGACCGAGACCATCGCAGGGACGCTAGACACTAGACAC
TAAAAGAACCATTGAGTGAACTACTCAATATCGCCACATCAGCTGACCAATTAGGGCATC
CAAGATTTTTTGCTATCGGGCCGGCGTCACGTTGAAGTGGAATTAAATTGACACTTGACA
GTTCTGACAGATGTTTGCGCGGAAAAGGGATTTACAAAAATGGCGCGAAAGTTTCTGATT
CTAAATTCAAACAAACGATTGATTTAATTTAAAATAATTCGTTTGAGCAACGTTCATGCG
AATCAAAATTCATTGACTGCGCGGTTATATGTGGTGACACCGACATCGTTCCGTCAGCCT
AGTCTAATCAAGTGACTTTTGGTGTAAACTAATATTGTGTGGTGCGTCAGAGGCGACGAC
CGCGTGCGTGAACTACTGATACTGCCACGAAAATAGCTTCAAATTGTTGATCAAAAGATG
GTGGATCGAGTTGATCTGCTGCTAGGGCGGTTTAGTGTAATCGAGAGCCTGATTCGACAG
ATTAGATATTCATTATTTTCAACTTCATATGAAACAAACATCTCAAATTAAAATCGGTCT
CATACATGAAACATTAAATAGTGATGGTAAAAATGATATCCATTCACACTGATGATGAAA
ATAATGTTATGTTAATTTAGATGACAAAATAGTTTATTACAAATTAGTAAGTATTATCCC
GGAATGCCCATTTGTCTCAGATATATCGTTTGTTTTACGAAAATTGGTTACACTCTTGGT
ACAAATCACTGTACTTATTACAGTCAAGTGTGACTGTAGAAAATTAACGTAAGACCTATC
CAACGCCGACAAGTCGTTTTCAAACATCTAATAATGTATTGTATTCATTCACGCATGGTA
TATTTATAAGGTTAAAAAAGGATGATAAACTTTATATTTAAAACAGAGAAACATTTTATC
AGAACACGACCAATAGCAAATTATCCAAAATTAGAAAAGTGCGCTAGTAATGAAAATTTT
ATTGAAAAAGGTCAAAAATATCCTAGTATTATCTTGAATACTTTTGATACAATTGATAAA
GATTAAAATATAAATAGTTTTTATTACAAATAAACATTTTACACAATTATATCGATAAAA
GCAGTTTTCAATCTAAAGCCATGAAACATCTGAAAATTAAGATTGTGACTGATTTTATAA
TTTTTAGTATCAATATTACTCATGTTGATTGTTAATGGATTGAATTAGTCCAACAAGAAC
CTTAAAACCAAATATGTTTAAAATTCAATTTTGCTGTTTGTCACAACATTCCATGGTCTA
AATGTTTGCGAATTGTTTTAAACTTTCATTCGTGGTTTTTTTTTGTATTTTCCTATTTTG
TAGTAGTCTAAACGTAAGTATTAGGTTAAGTTCAAACAATTTATGGATTGTTCCATACAA
ACTAGACGTGAC
(3432 bp)

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