GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000066-TA|BGIBMGA000066-PA|IPR001515|Ribosomal protein
L32e
         (134 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   6.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    20   8.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.9  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 26  RYDKLKRNWRKPRGIDNR 43
           +++ L  +W  PRG D+R
Sbjct: 631 QFNGLDVDWEYPRGADDR 648


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 104 SKKRKLIVERAQQLSIRVTNAAA 126
           SKKR+ ++  AQQ++  +    A
Sbjct: 303 SKKRRELLRLAQQVNANIAQITA 325


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
          protein 4 protein.
          Length = 133

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 52 YLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILM 88
          YL   + YG ++ T H     +  + + NV + E L+
Sbjct: 9  YLFLFVHYGWSEDTTHKYTTKYDNIDLENVVKNERLL 45


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 49  KGQYLMPNIGYGSN 62
           KGQ+  PN G+ +N
Sbjct: 317 KGQFRDPNTGFMTN 330


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 49  KGQYLMPNIGYGSN 62
           KGQ+  PN G+ +N
Sbjct: 317 KGQFRDPNTGFMTN 330


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,634
Number of Sequences: 317
Number of extensions: 1133
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 134
length of database: 114,650
effective HSP length: 51
effective length of query: 83
effective length of database: 98,483
effective search space:  8174089
effective search space used:  8174089
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)