Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000087-TA|BGIBMGA000087-PA|IPR007087|Zinc finger,
C2H2-type
(213 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45) 36 0.019
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.23
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.31
SB_56923| Best HMM Match : PT (HMM E-Value=0.95) 32 0.41
SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30) 31 0.54
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.72
SB_2510| Best HMM Match : zf-C2H2 (HMM E-Value=6.1e-15) 31 0.72
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45) 31 0.95
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.95
SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_28976| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.3
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.3
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_33542| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33) 29 2.2
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.9
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.9
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.9
SB_34917| Best HMM Match : zf-C2H2 (HMM E-Value=3.9e-37) 29 2.9
SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.9
SB_16269| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 2.9
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_32401| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-10) 29 3.8
SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9) 29 3.8
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.0
SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42) 28 5.0
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.0
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 28 5.0
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.0
SB_37094| Best HMM Match : PH (HMM E-Value=0.0005) 28 5.0
SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28) 28 5.0
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.7
SB_24547| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-18) 28 6.7
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25) 27 8.8
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 27 8.8
SB_12579| Best HMM Match : zf-C2H2 (HMM E-Value=5.4e-28) 27 8.8
SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_4802| Best HMM Match : zf-C2H2 (HMM E-Value=9.1e-19) 27 8.8
SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.8
SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.8
>SB_24062| Best HMM Match : Drf_FH1 (HMM E-Value=0.45)
Length = 1032
Score = 36.3 bits (80), Expect = 0.019
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 61 SIQTDETEQSASEFIVPEILEVPVENEKLDVI-----PHTPDRWPTLEILPGGVIKPADK 115
S ++D E S S +P L+ + N K+++ P + P + ++PA +
Sbjct: 420 STESDSDEWSKSGTKLP--LQTCLTNSKMNIKDCETEPDEDEAEPDEDETISNPVEPAQE 477
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHV-RWHENEQKV 162
+ N S K +T++ + +AC C ++F + +H+ R H +E KV
Sbjct: 478 SSNPTSHKEGITISEKKCHACLFCGKSFTCK--MARHIKRSHGSETKV 523
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 122 RKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
R+ +T E +AC+ C++ F L+ H+R H NE+
Sbjct: 117 RRHMLTHTKEKPFACSTCNKAFATKQTLIVHIRVHTNER 155
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 131 EMIYACAKCSQTFKFLYCLVKHVRWH-ENEQKVKKSNIAD--LILSKNRKK 178
E Y C KC + FK + L HV+ H +N +K K ++ + +L K+ ++
Sbjct: 68 ERPYECDKCHKRFKHKWTLKDHVKLHNDNLEKPHKCDLCNWAFLLKKDLRR 118
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 133 IYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
++ C +C ++F+ Y L H+R H + K K
Sbjct: 238 VFPCKECGKSFRSSYLLEVHLRRHAIKTKCK 268
>SB_17384| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 425
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 111 KPADKADNQNSRKSRV--TLNSEMIYACAKCSQTFKFLYCLVKHVRWH 156
K D++ +Q+S R T + + Y C C Q F +LY L KH+ H
Sbjct: 376 KYCDRSFSQSSTVLRHMRTHDKDKSYRCVHCGQVFAYLYALDKHLDTH 423
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKN 175
T + + Y C C +TF CL H+R H E+ K + SK+
Sbjct: 346 THSGDRPYKCEHCDKTFARTTCLTVHIRTHTGEKPHKCTQCGKSFTSKS 394
>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
Length = 441
Score = 31.9 bits (69), Expect = 0.41
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 79 ILEVPVENEKLDVIPHTPDRWPTLEIL-PGGVIKPADKADNQNSRKSRVTLNSEMIYACA 137
ILE V ++ H D + L P V + D++N + +S + + A
Sbjct: 30 ILEASVIHQDFLRFIHVDDHEMITKYLQPNSVEQKIKILDDENDGSEKKEEDSCSVMSSA 89
Query: 138 KCSQTFKFLYCLVKHVRWH---ENEQKVKKSNIADLILSKNRKKQDKQ 182
KC TF+ L K+++W Q V K + D +++ NR D++
Sbjct: 90 KCQGTFRMLN---KNMKWQWLTGTAQVVFKGSEPDFVITTNRPLSDEE 134
>SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30)
Length = 824
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 117 DNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
D + ++ + E Y C C FK LY L +H+R + ++ K K
Sbjct: 758 DKTHLQRHTMIHTGEKPYQCEVCGIPFKELYSLTRHMRCNRHKTKAK 804
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSK-NRKKQDKQANLN 186
+AC C++ F CL H+R H E+ + + + K N K + +LN
Sbjct: 683 HACPFCNKAFAENRCLQVHIRTHTGERPYQCEHCSHAFAQKQNLNKHIRCCHLN 736
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
A N + K T + E Y C +C + F L KH+R H E+ K
Sbjct: 444 AHNSDLTKHMRTHSGEKPYKCTQCGKAFVQNSNLTKHMRTHSGEKPYK 491
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 118 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
N N K T + E Y C +C + F L H+R H E+ K
Sbjct: 474 NSNLTKHMRTHSGEKPYKCTQCGKAFAHNDVLTTHMRTHSGEKPYK 519
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
T + E Y C +C + F + + L H+R H E+ K
Sbjct: 539 THSGEKPYKCTQCGKAFAWAFNLTTHMRTHSGEKPYK 575
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
T + E Y C +C + F + L H+R H E+ K
Sbjct: 511 THSGEKPYKCTQCGKAFARAFNLTTHMRTHSGEKPYK 547
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
T + E Y C +C + F L H+R H E+ K
Sbjct: 567 THSGEKPYKCTQCGKAFAHNGVLTTHMRTHSGEKPYK 603
>SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 921
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 83 PVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTLNSEMIYACAKCSQT 142
P EN + + P +E + + PADKA+N + Y C C +
Sbjct: 290 PPENSTAEANTSPNEGTPKIESVFSLQLIPADKAEN-------------ITYVCKSCGEQ 336
Query: 143 FKFLYCLVKHVRWHENEQKVKKSNIAD 169
FK + L H+R H +V SN A+
Sbjct: 337 FKKKFLLDIHLRSHALSGEVATSNAAN 363
>SB_2510| Best HMM Match : zf-C2H2 (HMM E-Value=6.1e-15)
Length = 230
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 115 KADN-QNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
+ DN ++ K V I+ C C + FK Y L +HVR H E+ K
Sbjct: 148 RLDNLEDFMKVTVLNGGARIFQCTHCEKEFKNSYELGRHVRVHTGEKPYK 197
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 131 EMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
E Y C CS+ F L KHVR H E+
Sbjct: 193 EKPYKCTYCSKAFSLTSNLYKHVRSHTREK 222
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKNRKKQDKQANLNTG 188
Y C +CS TFK Y L H++ ++ K N+ S + + QA L+ G
Sbjct: 171 YKCEQCSGTFKDNYNLRHHIQSVHLGERPYKCNLCGKCFSMSHTLKRHQATLHFG 225
>SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45)
Length = 243
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
T N E Y C C++ F L KHVR H E+
Sbjct: 183 THNGERPYKCKVCNKAFADSSTLTKHVRTHTGEK 216
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 113 ADKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHEN 158
A K +Q +R S+V + + C +C + F+ H+R+H N
Sbjct: 776 AFKIKDQLARHSKVHTREKQTFTCEECDKVFEMACGYRTHMRFHSN 821
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 118 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH 156
N N + + + + E Y C++C + FK + L H++ H
Sbjct: 462 NANLERHQASHSEERPYTCSQCDKAFKAPHYLALHMKSH 500
>SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 21 DVQPSREGRIEIFETCIIDHIEYDNECVIGDDQTNVG 57
D+ EG+ + +TC H EY+ CV G QT G
Sbjct: 140 DIDECAEGKDDCSQTCANTHGEYECACVDGYKQTAAG 176
>SB_28976| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 277
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 111 KPADKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIAD 169
KP + + S+ ++V M C +C + F Y L +H R H E++ K+ D
Sbjct: 22 KPQSQTHKKQSKPAKVDTARFM---CQQCGKCFTRAYTLKEHGRLHTGERREKRHKCRD 77
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 128 LNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKNRKKQDKQANLNT 187
++ E Y C +C + F L H R+H E+ K + L + K A +++
Sbjct: 112 VSREKRYQCQQCGKCFSKAGYLTVHYRYHTGERPYKCNQCGKLFTQSGDLR--KHAQIHS 169
Query: 188 G 188
G
Sbjct: 170 G 170
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 114 DKADNQNSRKSRVTLN--SEMIYACAKCSQTFKFLYCLVKHVRWHEN 158
+K +++ S LN S+ + C CS+ FK L KH+R H++
Sbjct: 878 EKTFKRSTHLSEHMLNHSSDQPFGCTHCSEKFKVSSMLTKHMRSHKD 924
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 126 VTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKNRKKQD 180
+T + + Y C C +++K L KH H +K K N+ D ++ + D
Sbjct: 640 LTHSEDRPYQCDVCGKSYKCYEALTKHTTTH--SKKPYKCNVCDKSYTRQKMLTD 692
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 126 VTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
+T E + C+ CS+++ LV+H R H +E+
Sbjct: 753 LTHRGERPFQCSTCSKSYSTSRSLVRHERSHSSEK 787
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 120 NSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENE 159
N + ++ + E YAC KC +TF+ LV H R H +E
Sbjct: 287 NLKAHALSHSHERPYACDKCDKTFQRTSQLVIHNRIHNSE 326
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 117 DNQNSRKSRVTLNSEMI---YACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILS 173
+NQ+ +K R ++SE + C+KCS + ++H + H E+K+ K + + +
Sbjct: 225 ENQDLKKHR-QIHSEQTKKTFRCSKCSDQIQGKKEYLEHRKSHPIERKIHKCEVCSRVFN 283
Query: 174 K 174
K
Sbjct: 284 K 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 114 DKADNQNSRKSRVTL-----NSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
DK D R S++ + NSE Y+C KC ++F+ L H+ H E+
Sbjct: 304 DKCDKTFQRTSQLVIHNRIHNSETPYSCDKCEKSFRGRTNLRLHLLVHSLEK 355
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 123 KSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH--ENEQKVKKSNIADLILSKNRKKQD 180
K V +E Y C CS +F CL KH H +E+ D S ++ D
Sbjct: 405 KPLVVYFTEKPYQCESCSMSFPRSSCLNKHRLTHMDTSERNAYVCQTCDKTFS-SKSNLD 463
Query: 181 KQANLNTG 188
+ L+TG
Sbjct: 464 QHLKLHTG 471
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 115 KADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKK 164
+A+ + VT S+ IY C +CS+TF + L +H + N +K K
Sbjct: 69 QANAEQQMADDVTACSKKIYQCDQCSKTFTRPHDLRRHTKSIHNGEKPYK 118
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 119 QNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH 156
+ R S T S +Y C +CS++F L H+ WH
Sbjct: 138 EEERASPSTTESA-VYQCTQCSKSFSNSSSLATHIGWH 174
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 111 KPADKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADL 170
K + + + S T+ S + + C CS++F L KH WH K+
Sbjct: 268 KSVNPQEEDDVTASLTTMES-LAHQCTFCSRSFHDYSSLAKHTTWHRKRLKLNSPQDVKA 326
Query: 171 ILSKNRKKQD 180
I S+ D
Sbjct: 327 IPSQTAIAND 336
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 117 DNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADL 170
+ N++ S++ + + C CS FK L KH WH K K A L
Sbjct: 402 EKPNAKPSKMEFSD---HKCTHCSLAFKDSSSLAKHNAWHAKTFKQKDKRGAPL 452
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
+ C +CS++F L +H WH+ V+
Sbjct: 358 HQCTQCSKSFNSGSSLARHFAWHKKASDVQ 387
>SB_33542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 106 PGGVIKPADKADNQNSRKSRVTLNSEMIYACAK--CSQTFKFLYCLVKHVRWHENEQKVK 163
PGG A N S S+ + +S ++ C C +TF +L L +H+ + E E +
Sbjct: 776 PGGFT--ATTLPNTQSHASQQSSSSSSLFQCTNEGCVRTFMWLSSLERHLAYGECEVRDT 833
Query: 164 KSNIADL 170
++ + D+
Sbjct: 834 RATMLDM 840
>SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33)
Length = 644
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 111 KPADKADNQNSR-KSRVTLNS-EMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKS 165
K +KA Q+ + K + L++ E Y C++C + FK L +H R H E+ K S
Sbjct: 385 KVCNKAFKQSCQLKQHMRLHTGEKPYKCSECDRGFKQASQLNQHYRLHTGEKPYKLS 441
>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 118 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRW 155
N + RK++ ++ Y C +C + F + Y KH+++
Sbjct: 288 NPSVRKTKFVISDGESYTCDRCGKVFAYKYYRDKHLKY 325
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 114 DKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
D + +N+ R N I C +C++ FK+ L KH++ H N +K K
Sbjct: 758 DGSHARNAAAKRKLSNGPRI--CEECNKAFKYPSDLKKHLQIHTNIKKFK 805
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 114 DKADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVR 154
D A N R+ ++T E + C C++ FK L KH++
Sbjct: 940 DFASPYNLRRHQLTHTDEKPFQCEVCARQFKEKSSLSKHIK 980
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 118 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWH 156
N N + + + + E Y C++C + FK + L H++ H
Sbjct: 394 NANLERHQASHSEERPYTCSQCDKAFKAPHYLALHMKSH 432
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKNRKKQDKQANLNTG 188
Y C KC++ F + LVKH R + K + +I S +R K +TG
Sbjct: 591 YVCTKCNKAFAYSASLVKHDRVYHRGVKPYECDICGRAFS-DRSGLVKHERTHTG 644
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWH 156
+ C++CS+ FK LVKH R H
Sbjct: 268 FCCSECSRAFKNKSDLVKHKRVH 290
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 86 NEKLDVIPHTPDRWPT----LEILPGGVIKPADKADNQNSRKSRVTLNSEMIYACAKCSQ 141
+E+ D PD WPT + G ++ + +Q K R + + C CS+
Sbjct: 771 SEEGDSEDEDPDDWPTEKENMYTEDGTLVVHIPYSHSQRKMKGR---RGNVRFTCRYCSK 827
Query: 142 TFKFLYCLVKHVRWHENEQKVK 163
F++ L H R H E+ K
Sbjct: 828 GFQWHSHLASHERTHTGEKPFK 849
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
Y C C ++F LV+H+R H E+ K
Sbjct: 932 YKCQYCVRSFNDSQMLVRHIRSHTGEKPFK 961
>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
+D+Q +KS + + ++ C +C + Y L +H+R H E+ +K
Sbjct: 55 SDSQKPKKS----SDKKLFQCKECGKCITSNYSLKEHLRIHSGEKPLK 98
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 129 NSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKS 165
+ E Y C +C ++F F L +H++ H E+ K S
Sbjct: 176 SGEKPYKCDECGKSFAFSNSLSRHLKVHSGEKPHKCS 212
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 73 EFIVPEILE-VPVEN--EKLDVIPHTP-------DRWPTLEILPGGVIKPADKADNQNSR 122
+F+ PE+++ + V+N E + ++PHT W T P ++ +
Sbjct: 70 KFLAPEVMQPIRVKNPPEPMVIVPHTKLEKERITHSWNTKAASRSAT--PEFESPKEEKA 127
Query: 123 KSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
+ N++ Y C CS+ F + +HV H ++ K
Sbjct: 128 QELDVNNTDKPYTCQHCSKVFTRSWNFQRHVLIHTGQKPYK 168
>SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 462
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 120 NSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
N +K +T + + Y C +C + FK + H++ H E+ K
Sbjct: 303 NLKKHLLTHSEQRPYQCDECGKCFKMPWHFKDHLKIHSGEKPFK 346
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 126 VTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
+T + E + C KC ++F + L H+R H E+
Sbjct: 79 LTHSGEKPHQCPKCDKSFTLAWNLKNHLRLHTGEK 113
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 123 KSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKN 175
K+ + ++ E Y C +C + + L H R H E K K N D+ +K+
Sbjct: 217 KTHLKVHDEKPYKCKECDKCYTHYGSLQIHQRIHSGE-KPYKCNECDMCYAKS 268
>SB_34917| Best HMM Match : zf-C2H2 (HMM E-Value=3.9e-37)
Length = 288
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKH 152
AD N R T + Y+C +CS++F + L+KH
Sbjct: 234 ADRSNLRAHLQTHSDVKKYSCKQCSKSFSRMSLLLKH 270
>SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 268
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQ 160
+ C+ C + FK CL KH R H E+
Sbjct: 78 HKCSICEKGFKTKRCLTKHFRTHTGER 104
>SB_16269| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 196
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 136 CAKCSQTFKFLYCLVKHVRWHENEQKVKK-SNIADLILSKNRKKQDKQANLN 186
CA+CS+ FK L H+R +++ +++ I N K ++KQ N+N
Sbjct: 77 CARCSRRFKSADTLGNHLRGYDSHFIMQEIGAIVKKHTYVNSKGEEKQININ 128
>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4085
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 69 QSASEFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTL 128
Q + EF VP + P E+E + D P + G + A ++ ++S KS
Sbjct: 106 QESEEFTVPSVESQPEEDETKSSRKSSLDSQPEIATAQGSI---ASSSEVESSSKSTAVQ 162
Query: 129 NSEMIYACAKCSQT 142
NS+ Y S T
Sbjct: 163 NSDPKYPYITMSPT 176
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKNRKKQDKQANLN 186
T + E Y C C ++F+ L H+R H N+++ S L +K +Q ++
Sbjct: 538 THSGEKPYRCEICEKSFRDKDSLNIHMRIHNNDKRHSCSYCPKLFYTKTELRQ--HVRIH 595
Query: 187 TG 188
TG
Sbjct: 596 TG 597
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
A + K T E Y+C C + F L+ H R H NE+ K
Sbjct: 247 ASKSDLDKHERTHTGEKPYSCKYCGRMFGESSSLIMHQRIHTNEKPYK 294
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 130 SEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
+E Y C C ++F + LV H R H +E+ K
Sbjct: 457 NERPYVCTTCGKSFTVISQLVMHNRSHTDERPYK 490
>SB_32401| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-10)
Length = 269
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 129 NSEMIYACAKCSQTFKFLYCLVKHVRWHENE 159
+++M Y C CSQ F+ L KH+ +H ++
Sbjct: 193 DNKMSYKCEVCSQLFRSPLGLQKHLEFHTDD 223
>SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9)
Length = 349
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 67 TEQSASEFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRV 126
T S+ +P++ EN L T +E L G IK + +N+N+ K R
Sbjct: 145 TINSSGTPALPKLASFDTENSSLVTSSSTSGSHVDIEKLSNGSIKESSDCENENASKRRK 204
Query: 127 T 127
T
Sbjct: 205 T 205
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 82 VPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKA-DNQNSRKSRVTLNSEMIYACAKCS 140
VP+++ V+ H +R G I+P + + + +T + + I+ C KC
Sbjct: 288 VPLDSSGQPVVVHLKER--------GRPIRPKETGLTEEELTQEIITSSGQKIFKCKKCE 339
Query: 141 QTFKFLYCLVKHVRWH 156
+ F F L +H+ H
Sbjct: 340 KEFSFSSRLKRHLLVH 355
>SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42)
Length = 554
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKH 152
AD N R T Y+C++C ++F + LVKH
Sbjct: 509 ADRSNLRAHMQTHAVVKKYSCSRCKKSFSRMSLLVKH 545
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 1 MSASALEGEDLDNVRLVRMEDVQPSREGRIEIFETCIIDHIEYDNECVIGDDQTNVGGIV 60
M+A + G+ L+ +R+V + R + ++D ++ +D+ NV +
Sbjct: 1 MAAMLVGGKKLNELRVVDLRQELEKRGLEKSGVKAILVDRLQ-KALLAEAEDEGNVEEME 59
Query: 61 SIQTDETEQSASEFIVPEILEVPVENEKLDVIPHTPD 97
+ + DE + E I + E E + + HTPD
Sbjct: 60 NEEVDENMEEGGEDIEEDTNEPKEEQQPVTKEKHTPD 96
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 111 KPADKADNQNSR-KSRVTLNS-EMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIA 168
K DKA +Q+ K + +++ E Y C C + F Y L H+R H E+ K +
Sbjct: 821 KECDKAFSQSGGLKVHMRVHTGEKPYPCPLCERAFAKGYNLKTHMRTHTGEKPYKCDFCS 880
Query: 169 DLILSKNRKKQDKQANLNTG 188
L + Q Q + G
Sbjct: 881 KLFSQHSTLMQHVQRHQGKG 900
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 122 RKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILSKNRKKQDK 181
R +++ + + + C C + F CL H+ E E++ K+ K KK+
Sbjct: 1308 RVHKISHSEDKPFKCDTCGRKFNQKICLTLHLPCREEERRQKREEARKRREEKLAKKESS 1367
Query: 182 QAN 184
+++
Sbjct: 1368 KSS 1370
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 118 NQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
N R SR+ Y C CS++F + LV H+R H E+
Sbjct: 444 NDLKRHSRIHTGIRP-YKCHVCSKSFTVEFTLVCHLRTHTGER 485
>SB_37094| Best HMM Match : PH (HMM E-Value=0.0005)
Length = 1007
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 48 VIGDDQTNVGGIVSIQTDETEQSASEFIVPEILEVPVEN 86
++G D GG S +++ ++Q+ S+ I+P+ EV N
Sbjct: 304 LLGHDMDGRGGSPSDKSNTSKQTGSDLIIPQSCEVAFTN 342
>SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28)
Length = 998
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 12 DNVRLVRMEDVQPSREGRIEIFETCIIDHIEYDNE---CVIGDDQTNVGGIVSIQTDETE 68
+++ L +E+ + R ++E + H++ +E C + G I ++Q + TE
Sbjct: 845 EDLSLASVEEFEHQRAKKLEQENKVLSKHLQEVSEQLTCARSTISSLEGTIHTMQMNTTE 904
Query: 69 QSASEFIVPEILEVPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNS 121
++ I + EN+KL TP P+ ++ P +P+D D NS
Sbjct: 905 ------LLGLIRSLTKENDKLKQ-ERTPMATPSAQLTPLSPREPSDHTDTDNS 950
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 111 KPADKADNQNSRKSRVTLNS--EMIYACAKCSQTFKFLYCLVKHVRWHENEQK 161
KP + +++NS K+ + +S E + C C + + + +H+ + EQK
Sbjct: 42 KPFEYDESENSLKTDIETSSVKEKTFGCGLCIEKLRVASSMKEHIETIQKEQK 94
>SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 347
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 120 NSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQK 161
N + R+T E + C C + F +Y L H+ H NE+K
Sbjct: 270 NYKNHRLTHTGEKPFKCHICGKAFHQVYNLTFHMHTH-NEKK 310
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVR-WHENEQKVKKSNI 167
T N + + C +C + F + L KHVR HEN+ + + I
Sbjct: 305 THNEKKPFTCLECGKGFCRNFDLKKHVRKLHENKTQTENGKI 346
>SB_24547| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-18)
Length = 195
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 129 NSEMIYACAKCSQTFKFLYCLVKHVRWH 156
+ E + CA C + F+ LV+HVR H
Sbjct: 110 SGEKPFKCAHCERLFRQASTLVRHVRTH 137
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 156 HENEQKVKKSNIADLILSKNRKKQD 180
HE+++K K I++ + SKNRK+Q+
Sbjct: 2096 HESQEKKKIVEISETLESKNRKQQE 2120
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 94 HTPDRWPTLEILPGGVIKPADKADNQNS 121
HTPD P+ +P + P DNQ+S
Sbjct: 724 HTPDNHPSTVHIPDKQLSPVHTQDNQSS 751
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 122 RKSRVTLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKKSNIADLILS 173
R + E + C KC + F L H++ NE+K+ K + +L+ S
Sbjct: 564 RHVKTVHEKEKPHHCEKCGKCFSSTSYLKLHIKSVHNEKKLFKCDQCNLLFS 615
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 127 TLNSEMIYACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
T++ + + C +C + F Y L +HV+ E+ +K
Sbjct: 685 TVHQDKAFKCERCEKKFSQPYHLTRHVKGCHKEKAMK 721
>SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25)
Length = 455
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 131 EMIYACAKCSQTFKFLYCLVKHVRWHENEQKVKK 164
+M ++C KC + FK L H + H+NE+ ++
Sbjct: 238 KMPFSCKKCYKCFKDAKKLKAHKKEHKNEKSCQR 271
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 82 VPVENEKLDVIPHTPDRWPTLEILPGGVIKPADKADNQNSRKSRVTLNSEMIYA-----C 136
VPV+ EK D T PG +I P S SR Y C
Sbjct: 92 VPVKEEKRDNSLITEITEEQSADFPGAMIHPNTNVLPLASDDSRAHTGKNRTYPSKPCKC 151
Query: 137 AKCSQTFKFLYCLVKHVRWHENEQ 160
+C ++F++ L H R H E+
Sbjct: 152 KECGRSFRYRGHLSSHQRIHSGEK 175
>SB_12579| Best HMM Match : zf-C2H2 (HMM E-Value=5.4e-28)
Length = 400
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 136 CAKCSQTFKFLYCLVKHVRWHENEQ 160
C++ Q FK Y LV H+R H E+
Sbjct: 243 CSRNGQPFKAKYKLVNHIRVHTGEK 267
>SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 116 ADNQNSRKSRVTLNSEMIYACAKCSQTFKFLYCLVKHV 153
AD N R T N Y C +C +TF L KH+
Sbjct: 658 ADRSNLRAHLQTHNPLKQYKCERCDRTFALKSYLNKHL 695
>SB_4802| Best HMM Match : zf-C2H2 (HMM E-Value=9.1e-19)
Length = 374
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 130 SEMIYACAKCSQTFKFLYCLVKHVRWHENEQ 160
+E + C CS+TF + L H+R H E+
Sbjct: 315 NEKPFKCGFCSRTFAGITTLNNHIRTHTGEK 345
>SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 646
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
Y C +C + F L +H+R H E+ K
Sbjct: 389 YKCTQCGKAFAHASSLTEHMRTHSGEKPHK 418
>SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 684
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 134 YACAKCSQTFKFLYCLVKHVRWHENEQKVK 163
Y C +C ++F F L KH H E+ K
Sbjct: 176 YKCTECDKSFAFQSLLTKHSFSHTGERPFK 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.131 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,632,241
Number of Sequences: 59808
Number of extensions: 275727
Number of successful extensions: 988
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 761
Number of HSP's gapped (non-prelim): 240
length of query: 213
length of database: 16,821,457
effective HSP length: 79
effective length of query: 134
effective length of database: 12,096,625
effective search space: 1620947750
effective search space used: 1620947750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -