GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000046-TA|BGIBMGA000046-PA|IPR012464|Protein of unknown
function DUF1676
         (314 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   4.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   4.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   4.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   4.8  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 256 PHHEYYYREKSAET 269
           PHHEY+  + S+ET
Sbjct: 147 PHHEYFDSKSSSET 160


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 256 PHHEYYYREKSAET 269
           PHHEY+  + S+ET
Sbjct: 147 PHHEYFDSKSSSET 160


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 256 PHHEYYYREKSAET 269
           PHHEY+  + S+ET
Sbjct: 147 PHHEYFDSKSSSET 160


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 256 PHHEYYYREKSAET 269
           PHHEY+  + S+ET
Sbjct: 147 PHHEYFDSKSSSET 160


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,171
Number of Sequences: 2123
Number of extensions: 9939
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 314
length of database: 516,269
effective HSP length: 64
effective length of query: 250
effective length of database: 380,397
effective search space: 95099250
effective search space used: 95099250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)