GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000041-TA|BGIBMGA000041-PA|undefined
         (60 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122160-1|AAM52672.1|  489|Drosophila melanogaster LD16635p pro...    25   9.5  
AE014134-785|AAF50971.1|  489|Drosophila melanogaster CG11927-PA...    25   9.5  

>AY122160-1|AAM52672.1|  489|Drosophila melanogaster LD16635p
           protein.
          Length = 489

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 37  NRAYSPKNRPSPAPMYITAPG 57
           +R Y P NRP P PM +   G
Sbjct: 95  DRNYPPMNRPPPLPMQLMNMG 115


>AE014134-785|AAF50971.1|  489|Drosophila melanogaster CG11927-PA
           protein.
          Length = 489

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 37  NRAYSPKNRPSPAPMYITAPG 57
           +R Y P NRP P PM +   G
Sbjct: 95  DRNYPPMNRPPPLPMQLMNMG 115


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.313    0.126    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,882,706
Number of Sequences: 52641
Number of extensions: 40156
Number of successful extensions: 128
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126
Number of HSP's gapped (non-prelim): 2
length of query: 60
length of database: 24,830,863
effective HSP length: 41
effective length of query: 19
effective length of database: 22,672,582
effective search space: 430779058
effective search space used: 430779058
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)