Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000081-TA|BGIBMGA000081-PA|IPR003958|Transcription
factor CBF/NF-Y/archaeal histone, IPR009072|Histone-fold
(119 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47640.1 68418.m05882 CCAAT-box binding transcription factor ... 69 6e-13
At4g14540.1 68417.m02240 CCAAT-box binding transcription factor ... 69 6e-13
At2g38880.3 68415.m04778 histone-like transcription factor (CBF/... 64 2e-11
At2g38880.2 68415.m04777 histone-like transcription factor (CBF/... 64 2e-11
At2g38880.1 68415.m04779 histone-like transcription factor (CBF/... 64 2e-11
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 64 2e-11
At2g47810.1 68415.m05967 histone-like transcription factor (CBF/... 63 4e-11
At2g37060.2 68415.m04548 CCAAT-box binding transcription factor,... 63 4e-11
At2g37060.1 68415.m04547 CCAAT-box binding transcription factor,... 63 4e-11
At3g53340.1 68416.m05885 CCAAT-box binding transcription factor,... 63 6e-11
At1g21970.1 68414.m02749 CCAAT-box binding transcription factor ... 62 1e-10
At2g13570.1 68415.m01496 CCAAT-box binding transcription factor,... 61 2e-10
At1g09030.1 68414.m01007 histone-like transcription factor (CBF/... 60 4e-10
At5g47670.1 68418.m05885 CCAAT-box binding transcription factor ... 59 9e-10
At5g08190.1 68418.m00957 TATA-binding protein-associated phospho... 52 1e-07
At5g23090.2 68418.m02700 TATA-binding protein-associated phospho... 51 2e-07
At5g23090.1 68418.m02699 TATA-binding protein-associated phospho... 51 2e-07
At1g54830.3 68414.m06253 CCAAT-box binding transcription factor ... 33 0.039
At1g54830.2 68414.m06252 CCAAT-box binding transcription factor ... 33 0.039
At1g54830.1 68414.m06251 CCAAT-box binding transcription factor ... 33 0.039
At1g08970.4 68414.m01000 CCAAT-box binding transcription factor ... 33 0.039
At1g08970.3 68414.m00999 CCAAT-box binding transcription factor ... 33 0.039
At1g08970.2 68414.m00998 CCAAT-box binding transcription factor ... 33 0.039
At1g08970.1 68414.m00997 CCAAT-box binding transcription factor ... 33 0.039
At1g56170.1 68414.m06454 transcription factor, putative similar ... 32 0.12
At5g63470.1 68418.m07968 CCAAT-box binding transcription factor ... 30 0.48
At3g48590.1 68416.m05305 CCAAT-box binding transcription factor ... 30 0.48
At2g18680.1 68415.m02176 expressed protein 29 0.63
At1g20060.1 68414.m02511 kinesin motor protein-related 29 0.84
At2g18690.1 68415.m02177 expressed protein 27 3.4
At1g17750.1 68414.m02197 leucine-rich repeat transmembrane prote... 26 7.8
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 26 7.8
>At5g47640.1 68418.m05882 CCAAT-box binding transcription factor
subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) similar
to CAAT-box DNA binding protein subunit B (NF-YB)
(SP:P25209) (GI:22380) [Zea mays]; contains Pfam PF00808
: Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; identical to cDNA transcription factor
Hap3b (Hap3b) mRNA, partial cds GI:9965734
Length = 190
Score = 69.3 bits (162), Expect = 6e-13
Identities = 32/92 (34%), Positives = 59/92 (64%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
++ + +D LP+ V+RI+K+ALP+ ISK+A+ + + S F+ +VT A++ + +K
Sbjct: 23 LSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEK 82
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK + G D++ AM + F+ +VEPL L+ +
Sbjct: 83 RKTINGDDLLWAMTTLGFEDYVEPLKVYLQRF 114
>At4g14540.1 68417.m02240 CCAAT-box binding transcription factor
subunit B (NF-YB) (HAP3 ) (AHAP3) family contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone; similar to LEC1-like protein
(GI:22536010) [Phaseolus coccineus]
Length = 161
Score = 69.3 bits (162), Expect = 6e-13
Identities = 32/87 (36%), Positives = 56/87 (64%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ V+RI+K+ALP+ ISK+A+ + + S F+ ++T A++ + +KRK +
Sbjct: 22 QDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTIN 81
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ +VEPL L+ Y
Sbjct: 82 GDDLLWAMTTLGFEDYVEPLKVYLQKY 108
>At2g38880.3 68415.m04778 histone-like transcription factor
(CBF/NF-Y) family protein similar to CAAT-box DNA
binding protein subunit B (NF-YB) (SP:P25209) (GI:22380)
[Zea mays] and CCAAT-binding transcription factor
subunit A (CBF-A) (NF-Y protein chain B) (NF-YB)
(CAAT-box DNA binding protein subunit B) (SP:P25210)
[Petromyzon marinus]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 112
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K+ALP I K+A+ + + S F+ ++TS A++ + +KRK +
Sbjct: 22 QDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVN 81
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ ++EPL L Y
Sbjct: 82 GDDLLWAMATLGFEDYLEPLKIYLARY 108
>At2g38880.2 68415.m04777 histone-like transcription factor
(CBF/NF-Y) family protein similar to CAAT-box DNA
binding protein subunit B (NF-YB) (SP:P25209) (GI:22380)
[Zea mays] and CCAAT-binding transcription factor
subunit A (CBF-A) (NF-Y protein chain B) (NF-YB)
(CAAT-box DNA binding protein subunit B) (SP:P25210)
[Petromyzon marinus]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 112
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K+ALP I K+A+ + + S F+ ++TS A++ + +KRK +
Sbjct: 22 QDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVN 81
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ ++EPL L Y
Sbjct: 82 GDDLLWAMATLGFEDYLEPLKIYLARY 108
>At2g38880.1 68415.m04779 histone-like transcription factor
(CBF/NF-Y) family protein similar to CAAT-box DNA
binding protein subunit B (NF-YB) (SP:P25209) (GI:22380)
[Zea mays] and CCAAT-binding transcription factor
subunit A (CBF-A) (NF-Y protein chain B) (NF-YB)
(CAAT-box DNA binding protein subunit B) (SP:P25210)
[Petromyzon marinus]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 141
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K+ALP I K+A+ + + S F+ ++TS A++ + +KRK +
Sbjct: 22 QDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVN 81
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ ++EPL L Y
Sbjct: 82 GDDLLWAMATLGFEDYLEPLKIYLARY 108
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7)
[Mus musculus];
Length = 275
Score = 64.1 bits (149), Expect = 2e-11
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 2 AEKLEDLNLPLTVVTRIVKEALPS-----GVSISKEARTGLAKAASVFVLYVTSAATNIV 56
+EK+ LPL +V R+VK+ L VSI KEA +++A +F+ Y+++ A +
Sbjct: 3 SEKVVVDELPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFC 62
Query: 57 KNKKRKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
K+ +R+ + DV A+++++F F+EPL +LE +
Sbjct: 63 KDARRQTMKADDVFKALEEMDFSEFLEPLKSSLEDF 98
>At2g47810.1 68415.m05967 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to LEC1-like protein
(GI:22536010) [Phaseolus coccineus]
Length = 160
Score = 63.3 bits (147), Expect = 4e-11
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 1 MAEKLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKK 60
M K +D LP+ V RI+K LP+ +SKEA+ + + S F+ +VT A++ +K
Sbjct: 47 MMVKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEK 106
Query: 61 RKALTGQDVIDAMKDIEFDRFVEPLGEALEHY 92
RK + G D+ AM ++ FD + L + L Y
Sbjct: 107 RKTVNGDDICWAMANLGFDDYAAQLKKYLHRY 138
>At2g37060.2 68415.m04548 CCAAT-box binding transcription factor,
putative similar to CAAT-box DNA binding protein subunit
B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains
Pfam PF00808 : Histone-like transcription factor
(CBF/NF-Y) and archaeal histone
Length = 173
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K LP+ I+K+A+ + + S F+ +VTS A++ + +KRK +
Sbjct: 31 QDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTIN 90
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ ++EPL L Y
Sbjct: 91 GDDLLWAMATLGFEDYMEPLKVYLMRY 117
>At2g37060.1 68415.m04547 CCAAT-box binding transcription factor,
putative similar to CAAT-box DNA binding protein subunit
B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains
Pfam PF00808 : Histone-like transcription factor
(CBF/NF-Y) and archaeal histone
Length = 173
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K LP+ I+K+A+ + + S F+ +VTS A++ + +KRK +
Sbjct: 31 QDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTIN 90
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ ++EPL L Y
Sbjct: 91 GDDLLWAMATLGFEDYMEPLKVYLMRY 117
>At3g53340.1 68416.m05885 CCAAT-box binding transcription factor,
putative similar to CAAT-box DNA binding protein subunit
B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains
Pfam PF00808 : Histone-like transcription factor
(CBF/NF-Y) and archaeal histone
Length = 228
Score = 62.9 bits (146), Expect = 6e-11
Identities = 29/87 (33%), Positives = 53/87 (60%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D LP+ ++RI+K LP I+K+A+ + + S F+ +VTS A++ + +KRK +
Sbjct: 30 QDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTIN 89
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D++ AM + F+ +++PL L Y
Sbjct: 90 GDDLLWAMATLGFEDYIDPLKVYLMRY 116
>At1g21970.1 68414.m02749 CCAAT-box binding transcription factor
(LEC1) similar to CAAT-box DNA binding protein subunit B
(NF-YB) (SP:P25209) (GI:22380) [Zea mays]; identical to
GB:AAC39488 GI:3282674 from [Arabidopsis thaliana] (Cell
93 (7), 1195-1205 (1998)); identified in Plant Cell 2003
Jan;15(1):5-18; contains Pfam PF00808 : Histone-like
transcription factor (CBF/NF-Y) and archaeal histone
Length = 238
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D +P+ V RI+++ LPS IS +A+ + + S ++ +VT A + ++RK +T
Sbjct: 60 QDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTIT 119
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+D++ AM + FD +V+PL + Y
Sbjct: 120 AEDILWAMSKLGFDNYVDPLTVFINRY 146
>At2g13570.1 68415.m01496 CCAAT-box binding transcription factor,
putative similar to CAAT-box DNA binding protein subunit
B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains
Pfam PF00808 : Histone-like transcription factor
(CBF/NF-Y) and archaeal histone
Length = 215
Score = 61.3 bits (142), Expect = 2e-10
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 4 KLEDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKA 63
K +D LP+ V RI+K+ LP ISK+A+ + + S F+ +VT A++ + +KRK
Sbjct: 35 KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKT 94
Query: 64 LTGQDVIDAMKDIEFDRFVEPL 85
+ G D+I A+ + F+ +V PL
Sbjct: 95 INGDDIIWAITTLGFEDYVAPL 116
>At1g09030.1 68414.m01007 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to CAAT-box DNA binding
protein subunit B (NF-YB) (GI:22380) [Zea mays]
Length = 139
Score = 60.1 bits (139), Expect = 4e-10
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
ED LP+ V R++K+ LPS ISKEA+ + + A+ F+ +VT A+ + RK +
Sbjct: 4 EDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVN 63
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
G D+ A+ + D + + +G L Y
Sbjct: 64 GDDIWWALSTLGLDNYADAVGRHLHKY 90
>At5g47670.1 68418.m05885 CCAAT-box binding transcription factor
family protein / leafy cotyledon 1-related (L1L)
supporting cDNA gi|27372446|gb|AY138461.1|; contains
Pfam PF00808 : Histone-like transcription factor
(CBF/NF-Y) and archaeal histone; contains similarity to
CCAAT-binding transcription factor subunit A (CBF-A)
(NF-Y protein chain B) (NF-YB) (CAAT-box DNA binding
protein subunit B) (Swiss-Prot:P25209) [Zea mays]
Length = 234
Score = 58.8 bits (136), Expect = 9e-10
Identities = 26/87 (29%), Positives = 50/87 (57%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
+D +P+ V RI++ LP+ IS +++ + + S ++ ++T A + ++RK +T
Sbjct: 59 QDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTIT 118
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+DV+ AM + FD ++EPL L Y
Sbjct: 119 AEDVLWAMSKLGFDDYIEPLTLYLHRY 145
>At5g08190.1 68418.m00957 TATA-binding protein-associated
phosphoprotein Dr1 protein, putative similar to Dr1
protein homolog (SP:P49592) [Arabidopsis thaliana];
similar to TATA-binding protein-associated
phosphoprotein (Down-regulator of transcription 1) (DR1
protein) (SP:Q01658) [Homo sapiens]; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 163
Score = 51.6 bits (118), Expect = 1e-07
Identities = 22/87 (25%), Positives = 50/87 (57%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
ED +LP +T+I+KE LP+ V ++++A+ L + F+ ++S + + + ++ +
Sbjct: 12 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRTIA 71
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ V+ A++ + F +VE + A E +
Sbjct: 72 PEHVLKALQVLGFGEYVEEVYAAYEQH 98
>At5g23090.2 68418.m02700 TATA-binding protein-associated
phosphoprotein Dr1 protein, putative (DR1) identical to
Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana];
similar to TATA-binding protein-associated
phosphoprotein (Down-regulator of transcription 1) (DR1
protein (SP:Q01658) [Homo sapiens]; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 159
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/87 (25%), Positives = 50/87 (57%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
ED +LP +T+I+KE LP V ++++A+ L + F+ V+S + ++ + ++ +
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ V+ A++ + F ++E + A E +
Sbjct: 72 PEHVLKALQVLGFGEYIEEVYAAYEQH 98
>At5g23090.1 68418.m02699 TATA-binding protein-associated
phosphoprotein Dr1 protein, putative (DR1) identical to
Dr1 protein homolog (SP:P49592) [Arabidopsis thaliana];
similar to TATA-binding protein-associated
phosphoprotein (Down-regulator of transcription 1) (DR1
protein (SP:Q01658) [Homo sapiens]; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 159
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/87 (25%), Positives = 50/87 (57%)
Query: 6 EDLNLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALT 65
ED +LP +T+I+KE LP V ++++A+ L + F+ V+S + ++ + ++ +
Sbjct: 12 EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIA 71
Query: 66 GQDVIDAMKDIEFDRFVEPLGEALEHY 92
+ V+ A++ + F ++E + A E +
Sbjct: 72 PEHVLKALQVLGFGEYIEEVYAAYEQH 98
>At1g54830.3 68414.m06253 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 70 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 128
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 129 IAAAVTRTDIFDFLVD 144
>At1g54830.2 68414.m06252 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 70 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 128
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 129 IAAAVTRTDIFDFLVD 144
>At1g54830.1 68414.m06251 CCAAT-box binding transcription factor
Hap5a, putative similar to heme activated protein
GI:6289057 from (Arabidopsis thaliana) GI:14577940
CCAAT-binding protein subunit HAP5 {Hypocrea jecorina}
similar to Transcription factor GB:CAA74053 GI:2398533
from [Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 217
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 70 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 128
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 129 IAAAVTRTDIFDFLVD 144
>At1g08970.4 68414.m01000 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 80 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 138
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 139 IAAAVTRTDIFDFLVD 154
>At1g08970.3 68414.m00999 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 80 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 138
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 139 IAAAVTRTDIFDFLVD 154
>At1g08970.2 68414.m00998 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 80 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 138
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 139 IAAAVTRTDIFDFLVD 154
>At1g08970.1 68414.m00997 CCAAT-box binding transcription factor
Hap5a, putative
Length = 231
Score = 33.5 bits (73), Expect = 0.039
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 9 NLPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQD 68
+LPL + +I+K A IS EA A+A +F+L +T + N + KR+ L D
Sbjct: 80 SLPLARIKKIMK-ADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKND 138
Query: 69 VIDAMKDIE-FDRFVE 83
+ A+ + FD V+
Sbjct: 139 IAAAVTRTDIFDFLVD 154
>At1g56170.1 68414.m06454 transcription factor, putative similar to
Transcription factor GB:CAA74053 GI:2398533 from
[Arabidopsis thaliana] similarity to transcription
factor Hap5a similar to transcription factor Hap5a
[Arabidopsis thaliana](GI:6523090)
Length = 199
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LPL + +I+K A IS EA AKA +F+L +T A + KR+ L D+
Sbjct: 77 LPLARIKKIMK-ADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDI 135
Query: 70 IDAMKDIE-FDRFVE 83
A+ + FD V+
Sbjct: 136 AAAISRTDVFDFLVD 150
>At5g63470.1 68418.m07968 CCAAT-box binding transcription factor
Hap5a, putative
Length = 250
Score = 29.9 bits (64), Expect = 0.48
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LPL + +I+K A IS EA AKA +F+L +T + + KR+ L D+
Sbjct: 79 LPLARIKKIMK-ADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137
Query: 70 IDAMKDIE-FDRFVE 83
A+ + FD V+
Sbjct: 138 AAAITRTDIFDFLVD 152
>At3g48590.1 68416.m05305 CCAAT-box binding transcription factor
Hap5a, putative
Length = 234
Score = 29.9 bits (64), Expect = 0.48
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDV 69
LPL + +I+K A IS EA AKA +F+L +T + + KR+ L D+
Sbjct: 66 LPLARIKKIMK-ADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124
Query: 70 IDAMKDIE-FDRFVE 83
A+ + FD V+
Sbjct: 125 AAAITRTDIFDFLVD 139
>At2g18680.1 68415.m02176 expressed protein
Length = 249
Score = 29.5 bits (63), Expect = 0.63
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 28 SISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEFDR 80
S S TGL +SVFV+ + T V + K+L GQ D+++D+E+ +
Sbjct: 189 SFSVTLTTGLVLMSSVFVVRMFQLVTYTVAYFQCKSLQGQ---DSLRDVEYTK 238
>At1g20060.1 68414.m02511 kinesin motor protein-related
Length = 951
Score = 29.1 bits (62), Expect = 0.84
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 10 LPLTVVTRIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKAL 64
+PLT+ TR + L V + +E + G+A+ +S F +T + ++ KKR AL
Sbjct: 382 IPLTMNTRYL---LAVTVGVPEEPKEGIAETSSKFFGSLTRYLRDYLEGKKRMAL 433
>At2g18690.1 68415.m02177 expressed protein
Length = 322
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 19 VKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDIEF 78
+ + + G S++ TG VF + + T V + K+L G+DV ++++D+E+
Sbjct: 254 ILQLINMGRSLAVTLTTGFVLVCLVFAVRMFQLVTYTVAYFQCKSLQGRDV-ESLRDVEY 312
>At1g17750.1 68414.m02197 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor-like protein kinase
INRPK1 GI:1684913 from [Ipomoea nil]
Length = 1088
Score = 25.8 bits (54), Expect = 7.8
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 23 LPSGVSISKEARTGLAKAASVF---VLYVTSAATNIVK-NKKRKALTGQ-DVIDAMK--- 74
+PS V + K R GL +A+VF + A N+ + N LTG V+ ++K
Sbjct: 619 IPSSVGLLKSLRYGLDLSANVFTGEIPTTLGALINLERLNISNNKLTGPLSVLQSLKSLN 678
Query: 75 --DIEFDRFVEPL 85
D+ +++F P+
Sbjct: 679 QVDVSYNQFTGPI 691
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/74 (21%), Positives = 36/74 (48%)
Query: 17 RIVKEALPSGVSISKEARTGLAKAASVFVLYVTSAATNIVKNKKRKALTGQDVIDAMKDI 76
+ KE +PS V + + +A++ +T+ ++ + NK+R D+ D +++
Sbjct: 742 KTTKEDIPSPVMPRRPRSLRKSFSANIEFTELTTLYSDDMMNKERNQKQNTDIDDVSENL 801
Query: 77 EFDRFVEPLGEALE 90
+ + F + EA E
Sbjct: 802 KNEAFDDTESEAEE 815
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,787,404
Number of Sequences: 28952
Number of extensions: 52633
Number of successful extensions: 228
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 197
Number of HSP's gapped (non-prelim): 32
length of query: 119
length of database: 12,070,560
effective HSP length: 72
effective length of query: 47
effective length of database: 9,986,016
effective search space: 469342752
effective search space used: 469342752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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