Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000076-TA|BGIBMGA000076-PA|undefined
(682 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 37 0.051
At3g51650.1 68416.m05664 expressed protein 35 0.15
At3g51640.1 68416.m05663 expressed protein 35 0.15
At1g03760.1 68414.m00356 prefoldin subunit family protein contai... 34 0.27
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 33 0.47
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.47
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 33 0.63
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 33 0.63
At2g36720.1 68415.m04505 PHD finger transcription factor, putative 33 0.83
At1g15660.1 68414.m01880 expressed protein similar to CENPCA pro... 33 0.83
At1g63480.1 68414.m07178 DNA-binding family protein contains a A... 31 1.9
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 31 2.5
At4g26630.1 68417.m03837 expressed protein 31 2.5
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 31 2.5
At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger) fa... 31 3.3
At2g20240.1 68415.m02365 expressed protein 31 3.3
At2g22795.1 68415.m02704 expressed protein 30 5.8
At1g05170.1 68414.m00520 galactosyltransferase family protein 30 5.8
At4g35270.1 68417.m05012 RWP-RK domain-containing protein simila... 29 7.7
At3g04810.2 68416.m00521 protein kinase, putative similar to LST... 29 7.7
At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing ... 29 7.7
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 36.7 bits (81), Expect = 0.051
Identities = 43/265 (16%), Positives = 106/265 (40%), Gaps = 8/265 (3%)
Query: 118 KSADVRHSERNLDNASQIRL-KNTLRINVPEENSQRIDQIRCQGNAKVRPDITSTIRRSS 176
+ AD++ S R+ D +++ + K + + + +R+ + + D R+
Sbjct: 18 EEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEK 77
Query: 177 SFNTVNKNNNYIDTRHNYRRPSGQSEECNCSDDSDNVSLGKCK--DYKYKMLRGRLDSAE 234
++ + + R R+ S ++ D+ D + + + +++ RG+ D
Sbjct: 78 ERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGK-DRKR 136
Query: 235 LKSAVPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSR 294
+ + + +R+ R RV +ER R + RD R + SR
Sbjct: 137 DREREERKDKEREREKDRERREREREEREKERVKERERRE--REDGERDRREREKERGSR 194
Query: 295 RISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSNWKKRSS 354
R E R + R+++ + +E G++K + S +++ + + K++S
Sbjct: 195 RNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHED--SPKRKSV 252
Query: 355 YDPMKAAQEGRRRQQMSKRQENKDD 379
D + ++ R +++ Q+ D+
Sbjct: 253 EDNGEKKEKKTREEELEDEQKKLDE 277
>At3g51650.1 68416.m05664 expressed protein
Length = 826
Score = 35.1 bits (77), Expect = 0.15
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%)
Query: 117 HKSADVRHSERNLDNASQIRLKNTLRINVPEENSQRIDQIRC-QGNAKVRPDITSTIRRS 175
H+S V + R + Q RL+ + EE QR + R + ++R +I +
Sbjct: 248 HESR-VEKARRKAEEKRQARLEK--EHSEEEERKQREEVARLVEERRRLRDEILEA-EKC 303
Query: 176 SSFNTVNKNNNYIDTRHNYRRPSGQSEECNCSDDSDNVSLGKCKDYKYKMLRGRLDSAEL 235
S F+ K + + + + + + +SD + K + + RG S L
Sbjct: 304 SKFSVAAKEKDTKEAEKKRQERRKERDRASSKSNSDGEEVDKRTRKETEQKRGLNKSDHL 363
Query: 236 KSAVPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERG 273
+ ++P P M+R+ GHGL N TK G
Sbjct: 364 EHE--RHAPDNLRGPNMERRHGHGLENNVTSNGTKSGG 399
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 35.1 bits (77), Expect = 0.15
Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 9/159 (5%)
Query: 117 HKSADVRHSERNLDNASQIRLKNTLRINVPEENSQRIDQIRC-QGNAKVRPDITSTIRRS 175
H+S V + R + Q RL+ + EE QR + R + ++R +I + S
Sbjct: 248 HESR-VEKARRKAEEKRQARLEK--EHSEEEERKQREEVARLVEERRRLRDEILEAEKCS 304
Query: 176 S-SFNTVNKNNNYIDTRHNYRRPSGQSEECNCSDDSDNVSLGKCKDYKYKMLRGRLDSAE 234
S K+ + + RR + D + V K+ + K RG S
Sbjct: 305 KLSVAAKEKDTKEAEKKRQERRKERDRASSKSNSDGEEVDKRTRKETEQK--RGLYKSDH 362
Query: 235 LKSAVPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERG 273
L+ ++P P M+R+ GHGL N TK G
Sbjct: 363 LEQE--RHAPDNLRVPNMERRHGHGLENNVTSNGTKSGG 399
>At1g03760.1 68414.m00356 prefoldin subunit family protein contains
similarity to Swiss-Prot:O94763 RNA polymerase II
subunit 5-mediating protein (RPB5-mediating protein)
[Homo sapiens]; contains Pfam profile PF02996: Prefoldin
subunit
Length = 391
Score = 34.3 bits (75), Expect = 0.27
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Query: 198 SGQSEECNCSDDSDNVSLGKCKDYKYKMLRGRLDSAELKSAVPANSPKC-----PNTPEM 252
S + E CN S+ G+ +D + + RL+ E++ + ++ E
Sbjct: 165 SSEKEPCNLSEGETEE--GELEDDDFARIMARLNELEIEEELEGEDGDSRGEDPDSSVES 222
Query: 253 QRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSR-RISEPTRQAMI 305
+ H LV+ S T + R + E NK GH S R+SEP +A I
Sbjct: 223 VEQIQHDLVKGSRGETDRGRVEYGKQETTISVPNKASGHSSSPRVSEPRVEAKI 276
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 33.5 bits (73), Expect = 0.47
Identities = 18/90 (20%), Positives = 40/90 (44%)
Query: 289 IGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSN 348
+G S + EP+++ + K E + +++K +KK + KE + N
Sbjct: 444 LGETSAKSEEPSKKKDKKKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVEVAKEEKKKN 503
Query: 349 WKKRSSYDPMKAAQEGRRRQQMSKRQENKD 378
KKR + +++ + K++++KD
Sbjct: 504 KKKRKHEEEETTETPAKKKDKKEKKKKSKD 533
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 33.5 bits (73), Expect = 0.47
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 251 EMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTK 310
E +R+ R T +++ + +ER + RR E ++ + +
Sbjct: 458 EAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQAR 517
Query: 311 SRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQM 370
R RE + + +K +++ Q + + K E K+R + K +E +R ++M
Sbjct: 518 KREEEREKEEEMAKKREEE-RQRKEREEVERKRREEQERKRREE-EARKREEERKREEEM 575
Query: 371 SKRQENK 377
+KR+E +
Sbjct: 576 AKRREQE 582
Score = 33.5 bits (73), Expect = 0.47
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 270 KERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKK 329
+E R E ER K ++R+ E ++ K R R+ + + E+ +K+
Sbjct: 462 REEEEAKRREEEETERKKREEEEARKREEERKRE--EEEAKRREEERKKREEEAEQARKR 519
Query: 330 PSQHRSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQMSKRQENKD 378
+ +A K E K+R + + ++ R+R++ R+ ++
Sbjct: 520 EEEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEE 568
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/109 (17%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 270 KERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKK 329
K+R R+E + +++ E ++ + + R +E + + +E+ +K+
Sbjct: 507 KKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKRREEQE-RKRREEEARKR 565
Query: 330 PSQHRSSSALATKEVEFSNWKKRSSYD-PMKAAQEGRRRQQMSKRQENK 377
+ + +A + + K+R + ++ QE +R ++M+KR+E +
Sbjct: 566 EEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQE 614
Score = 31.9 bits (69), Expect = 1.4
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 270 KERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLT---KSRSSTREVQLKTQEKG 326
KER V R ER + +R E R+ +++ + R EV+ K +E+
Sbjct: 540 KEREEVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQ 599
Query: 327 QKKPSQH---RSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQMSKRQENKD 378
++K + R KE E KKR + + + R++ +R+E +D
Sbjct: 600 ERKREEEMAKRREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKERED 654
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Query: 251 EMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTK 310
E +RK R +E R E R + + R+I E + + K
Sbjct: 552 EQERKRREEEARKREEERKREEEMAKRREQERQRKERE--EVERKIREEQERKREEEMAK 609
Query: 311 SRSSTREVQLKTQEKGQKKPSQHRS-SSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQ 369
R R+ + + + + +K+ + R +A E K+R + + +E RR++
Sbjct: 610 RREQERQKKEREEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRREEEAMRREE 669
Query: 370 MSKRQE 375
KR+E
Sbjct: 670 ERKREE 675
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 317 EVQLKTQEKGQKKP-SQHRSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQMSKRQE 375
E + K +E+ +K+ ++ R +E E + KKR + K +E +R ++ +KR+E
Sbjct: 444 ERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREEERKREEEEAKRRE 503
Query: 376 NK 377
+
Sbjct: 504 EE 505
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 33.1 bits (72), Expect = 0.63
Identities = 41/217 (18%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 297 SEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSNWKKRSSYD 356
+E T + S ST Q K +E ++K S + KE + SS D
Sbjct: 270 TETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSSEEESKV--KESGKNEKDASSSQD 327
Query: 357 PMKAAQEGRRRQQMSKRQ-ENKDDLXXXXXXXXXXXXXXFHTTNIADLTLDYTSEESEDD 415
K + R++++ S Q E K++ + + +S + E++
Sbjct: 328 ESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENE 387
Query: 416 LHALPVDPMITSTH---SDIVELRSRDCHSLRRQALNSDVKLGRSYVANFQVNQQADKKR 472
+ + S+ ++ E + S R++ NS+ K+ + + Q+ D+++
Sbjct: 388 IKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQK 447
Query: 473 REQDKRKTFILDDVTPTKENIDFITKTRDDVAIDKRR 509
++ KR++ + T KE D +KT + + R
Sbjct: 448 TDESKRES---GNDTSNKETEDDSSKTESEKKEENNR 481
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 33.1 bits (72), Expect = 0.63
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 251 EMQRKFGH--GLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRL 308
+++ + GH G S +KE +P E+ K S ISE + + L
Sbjct: 691 DLENRLGHHDGKASGSTHSASKESRKLPEHNAKMKEKQKDTEAASTHISERSTSKTGNIL 750
Query: 309 TKSRSSTREVQLKTQEKGQKKPSQHRSS 336
+ + RE + + Q+ + K SQ +S
Sbjct: 751 QDGQGAARENETEKQQDSRSKSSQQETS 778
>At2g36720.1 68415.m04505 PHD finger transcription factor, putative
Length = 1007
Score = 32.7 bits (71), Expect = 0.83
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 289 IGHQSRRISEPT-RQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFS 347
+G+ +R+I+ RQA++ + S S+ Q K + K +K +QH S + A K V S
Sbjct: 448 LGNSTRKITRKALRQALVGKAYLSASTNVSSQKKCRSKFKKMLTQH-SVTPKALKSVSLS 506
Query: 348 NWKKRSSY 355
K+ SY
Sbjct: 507 VSSKKRSY 514
>At1g15660.1 68414.m01880 expressed protein similar to CENPCA
protein (GI:11863170) {Zea mays}
Length = 705
Score = 32.7 bits (71), Expect = 0.83
Identities = 47/222 (21%), Positives = 85/222 (38%), Gaps = 16/222 (7%)
Query: 129 LDNASQIRLKNTLRINVPEENSQRIDQIRCQGNAKVRPDITSTIRRSSSFNTVNKNNNYI 188
L+ QI+ N + ++PE R ++ G+ P ++ S + K N +
Sbjct: 255 LEERLQIKSFNIEKFSIPEFQDVRKMNLKASGS---NPPNRKSL---SDIQNILKGTNRV 308
Query: 189 DTRHNYRRPSGQSEECNCSDDSDNVSLGKCKDYKYKMLRGRLDSAELK-----SAVPANS 243
R N PS Q+ + + S + V D + +L G +E+ +P S
Sbjct: 309 AVRKNSHSPSPQTIK-HFSSPNPPVDQFSFPDI-HNLLPGDQQPSEVNVQPIAKDIPNTS 366
Query: 244 PKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQA 303
P T ++ F +V+ S + + RS RD P IS + A
Sbjct: 367 PTNVGTVDVASPFNDSVVKRSGEDDSHIHSGIHRSHLSRD--GNPDICVMDSISNRS-SA 423
Query: 304 MISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVE 345
M+ + R+ +EV + E G + + R + A +E +
Sbjct: 424 MLQKNVDMRTKGKEVDVPMSESGANRNTGDRENDAEINEETD 465
>At1g63480.1 68414.m07178 DNA-binding family protein contains a AT
hook motif (DNA binding motifs with a preference for A/T
rich regions), Pfam:PF02178
Length = 361
Score = 31.5 bits (68), Expect = 1.9
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 220 DYKYKMLRGRLDSAELKSAVPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPRSE 279
D+ + + G + SA P P P P ++RK G V+ K R S P S+
Sbjct: 66 DFGHTIHMGVVSSASDADVQPPPPPPPPEEPMVKRKRGRPRKYGEPMVSNKSRDSSPMSD 125
Query: 280 PLRDER 285
P +R
Sbjct: 126 PNEPKR 131
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 281 LRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALA 340
+++ R K RRI E +A + + K+ E + + +E+ +++ ++ R+ L
Sbjct: 740 IKEAREKE--ENERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENERRAKEVLE 797
Query: 341 TKEVEFSNWKKRSSYDPMKAAQEGRRRQQMSKRQENKDDL 380
E E R + ++ + RR ++ +++ENK L
Sbjct: 798 QAENE------RKLKEALEQKENERRLKETREKEENKKKL 831
Score = 29.9 bits (64), Expect = 5.8
Identities = 29/163 (17%), Positives = 62/163 (38%), Gaps = 7/163 (4%)
Query: 218 CKDYKYKMLRGRLDSAELKSAVPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPR 277
C++ ++ +LD + A N + + RK L S + E +
Sbjct: 554 CEEKTKRIQNQQLDKKTHQKAAETNQECVYDWEQNARKLREALGNESTLEVSVELNGNGK 613
Query: 278 SEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSS 337
+R + + +R+ E TR +RL + V + +K ++ R +
Sbjct: 614 KMEMRSQSETKLNEPLKRMEEETR-IKEARLREENDRRERVAV------EKAENEKRLKA 666
Query: 338 ALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQMSKRQENKDDL 380
AL +E E + R + + A E R + + ++ + + +L
Sbjct: 667 ALEQEEKERKIKEAREKAENERRAVEAREKAEQERKMKEQQEL 709
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 31.1 bits (67), Expect = 2.5
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 269 TKERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQK 328
T++R S R + D P R+ SE +A + S+S+++E +K KG+
Sbjct: 619 TQKRSSAKRKKTDDDSDTSPKASSKRKKSENPIKASPA---PSKSASKEKPVKRAGKGKD 675
Query: 329 KPSQHRSSSALA--TKEVEFS 347
KPS +A+ K V+FS
Sbjct: 676 KPSDKVLKNAIVEILKRVDFS 696
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 31.1 bits (67), Expect = 2.5
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 239 VPANSPKCPNTPEMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSRRISE 298
+P N PK P+ +RK + ++ + VP S + +K ++ +
Sbjct: 1730 LPKNFPK-PDKQHSRRKEQRAETSSDRKLRKTDGDVVPISS--KGSESKHTRRNAKEEAS 1786
Query: 299 PTRQAMIS---RLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSNWKK---- 351
R+ +++ ++T + R + K + KG++K S + A ++K + WKK
Sbjct: 1787 SQREKLVASCEKVTSEETLRRSHEKKEKMKGREKSSNPEITDANSSKNENSNEWKKSKKA 1846
Query: 352 RSSYDPMKAAQEGRRRQQMSKRQENK 377
S D K A + Q RQ NK
Sbjct: 1847 SSKLDSSKRANPTDKIGQQD-RQINK 1871
>At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 30.7 bits (66), Expect = 3.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 571 PKQRYSGDFSMTSSTTSISQKKPKDIQ 597
P QRYSG S +SS++ S +PKD Q
Sbjct: 187 PVQRYSGSGSSSSSSSGSSSSEPKDKQ 213
>At2g20240.1 68415.m02365 expressed protein
Length = 713
Score = 30.7 bits (66), Expect = 3.3
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 583 SSTTSISQKKPKDIQPRYMDISKYKNDTSPKNFLRRDPSKTYVGVLGETKISRGSAQHYE 642
S +S+ ++ K + R+ +S + PKNF + + V L ETK+ GS++ E
Sbjct: 332 SPDSSVYREAKKRLSERWAMMSLNGDTQQPKNFPKVSTALGEVLALSETKVPTGSSE--E 389
Query: 643 MEQKKQELEK 652
+ KQE +
Sbjct: 390 TNKVKQETRR 399
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 298 EPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALATKEVEFSNWKKR--SSY 355
E T++ K SS++E KT+EK + SSS TK+ E +K SS
Sbjct: 499 EETKEKEDETKEKEESSSQE---KTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQ 555
Query: 356 DPMKAAQ-EGRRRQQMSKRQENKD 378
+ K + E + +++ S ++E K+
Sbjct: 556 EESKENETETKEKEESSSQEETKE 579
Score = 29.5 bits (63), Expect = 7.7
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 271 ERGSVPRSEPLRDERNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKP 330
E+ E ++ + + E T++ ++ K S+ +E +T+EK +K
Sbjct: 548 EKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQE---ETKEKENEKI 604
Query: 331 SQHRSSSALATKEVEFSNWKKR---SSYDPMKAAQEGRRRQQMSKRQENKDD 379
+ S+S TKE E +K S+ E +++Q+ + ++ D+
Sbjct: 605 EKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDE 656
>At1g05170.1 68414.m00520 galactosyltransferase family protein
Length = 404
Score = 29.9 bits (64), Expect = 5.8
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 248 NTPEMQRKFGHGLVRNSVRVTTKERGSVPRSEPLRDERNKPIGHQSR-RISEPTRQAMIS 306
N PE + H V + R+ G P+++ ++ + G + I+ T IS
Sbjct: 40 NIPE-SKGMSHPSVTEAERLKLVSEGCNPKAKEVKRDPQALFGEVANTHIALQTLDKTIS 98
Query: 307 RLTKSRSSTREVQLKTQ-------EKGQKKPSQHRSSSALATKEVEFSNWKKRSSYDPMK 359
L ++ R VQ Q + G+K+P + R + FS+ K+R S
Sbjct: 99 SLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATW 158
Query: 360 AAQEGRRRQQMSKRQ 374
Q G +R+++ + +
Sbjct: 159 MPQ-GEKRKRLEEEK 172
>At4g35270.1 68417.m05012 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 974
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 589 SQKKPKDIQPRYMDISKYKNDTSPKNFLRRDPSKTYVGVLGETKISR 635
+ ++P P+Y + +Y++ + NFL + SK VG+ G + +
Sbjct: 191 TSEQPHFFNPKYSSLKRYRDVSVAYNFLADEDSKESVGLPGRVFLKK 237
>At3g04810.2 68416.m00521 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 578
Score = 29.5 bits (63), Expect = 7.7
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Query: 210 SDNVSLGKCKDYKYKMLRGRLDSAELKSAVPA-NSPKCPNTPEMQRKFGHGLVRNSVRVT 268
SD SLG C Y+ ++ + +++ + N P P GLV++ +R
Sbjct: 184 SDIWSLGCCM-YEMTAMKPAFKAFDMQGLINRINRSIVPPLPAQYSAAFRGLVKSMLRKN 242
Query: 269 TKERGSVPRSEPLRDERNKP-IGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQ 327
+ R S +E LR +P I ++++P + ++ +S S+ R + + +
Sbjct: 243 PELRPSA--AELLRQPLLQPYIQKIHLKVNDPGSNVLPAQWPESESARRNSFPEQRRRPA 300
Query: 328 KK-----PSQHRSSSALATKEVEFSNWKKRSSYDPMKAAQEGRRRQQ 369
K PS+ R +S T S K S Y P++A+ R +Q
Sbjct: 301 GKSHSFGPSRFRDASGDGTVVRRTSEASKSSRYVPVRASASPVRPRQ 347
>At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing
protein
Length = 209
Score = 29.5 bits (63), Expect = 7.7
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 285 RNKPIGHQSRRISEPTRQAMISRLTKSRSSTREVQLKTQEKGQKKPSQHRSSSALA 340
R+ P+G +RR S ++ + T S SS+ + TQE + SQ + ++ ++
Sbjct: 70 RDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTEASQTKVTNLIS 125
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.126 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,923,506
Number of Sequences: 28952
Number of extensions: 606552
Number of successful extensions: 1782
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1741
Number of HSP's gapped (non-prelim): 52
length of query: 682
length of database: 12,070,560
effective HSP length: 86
effective length of query: 596
effective length of database: 9,580,688
effective search space: 5710090048
effective search space used: 5710090048
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 63 (29.5 bits)
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