Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000033-TA|BGIBMGA000033-PA|IPR013069|BTB/POZ,
IPR000210|BTB
(287 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 72 4e-13
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 62 3e-10
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 52 4e-07
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 49 3e-06
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 43 3e-04
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 42 4e-04
At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containi... 42 5e-04
At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/PO... 41 8e-04
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 41 0.001
At5g58550.1 68418.m07333 tetratricopeptide repeat (TPR)-containi... 40 0.001
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 40 0.001
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 40 0.003
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 38 0.008
At1g04390.1 68414.m00429 expressed protein 33 0.17
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 33 0.29
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 33 0.29
At5g67385.1 68418.m08497 phototropic-responsive protein, putativ... 32 0.39
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 32 0.51
At1g63210.1 68414.m07144 hypothetical protein contains Pfam prof... 31 0.67
At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containi... 31 0.89
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 31 0.89
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 31 0.89
At5g38830.1 68418.m04697 tRNA synthetase class I (C) family prot... 31 1.2
At4g39430.1 68417.m05580 expressed protein ; expression support... 31 1.2
At3g48360.1 68416.m05278 speckle-type POZ protein-related conta... 31 1.2
At3g44060.1 68416.m04720 F-box family protein contains F-box dom... 31 1.2
At5g13260.1 68418.m01523 expressed protein 30 2.1
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 30 2.1
At3g56300.1 68416.m06258 tRNA synthetase class I (C) family prot... 29 2.7
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 4.8
At4g22270.1 68417.m03221 expressed protein 29 4.8
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 4.8
At3g08570.1 68416.m00994 phototropic-responsive protein, putativ... 29 4.8
At2g27060.1 68415.m03251 leucine-rich repeat transmembrane prote... 29 4.8
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 28 8.3
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 28 8.3
At2g40290.2 68415.m04961 eukaryotic translation initiation facto... 28 8.3
At2g40290.1 68415.m04960 eukaryotic translation initiation facto... 28 8.3
At2g01450.1 68415.m00068 mitogen-activated protein kinase, putat... 28 8.3
At1g04010.1 68414.m00387 lecithin:cholesterol acyltransferase fa... 28 8.3
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 114 DMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYA 173
+ YV T +DVTF ++ AHR L+A D +AMF G +RE ++R I +P +K
Sbjct: 532 EQYVNNATLSDVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEV 591
Query: 174 FHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEEL 221
F +++ ++YT + + + +LL A+++ + L L EY + +++
Sbjct: 592 FELMMRFIYTGSV-DITNEISKDLLRAADQYLLEGLKRLCEYTIAQDI 638
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/108 (26%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 114 DMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYA 173
+ +V T +DVTF +D AH+ L+A D +AMF G ++E N++ + +P ++
Sbjct: 531 EKFVNNPTMSDVTFLIDGKQFYAHKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEV 590
Query: 174 FHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEEL 221
F +++ ++Y+ +I ++ +LL A+++ + L EY + +E+
Sbjct: 591 FELMMKFIYSGRI-NIAKHLAKDLLVAADQYLLEGLKRQCEYTIAQEI 637
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 114 DMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYA 173
+ YV T +DVTF ++D +AMF G +RE ++R I +P +K
Sbjct: 499 EQYVNNATLSDVTFLVEDAF---------------RAMFDGGYREKDARDIEIPNIKWEV 543
Query: 174 FHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEELRHKDRV 227
F +++ ++YT + + + +LL A+++ + L L EY + + L D V
Sbjct: 544 FELMMRFIYTGSV-DITNEISKDLLRAADQYLLEGLKRLCEYTIAQYLTKSDTV 596
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 117 VERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHI 176
+E ADVTF +D AH+ +L AR +A G R N+ I + V+ F +
Sbjct: 196 LESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKM 255
Query: 177 LLCYMYTDKIPSVES--------ARCL---ELLELANRFCMNRLVNLVEYKVIE 219
LL ++Y D++P ++ A L LL A+R+ + RL + E K+ E
Sbjct: 256 LLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLRTICESKLCE 309
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 124 DVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMYT 183
D+ F + D + AH+ IL AR +A F G +N I + ++ F +L ++YT
Sbjct: 195 DIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIYT 254
Query: 184 DKIPSV 189
D +P+V
Sbjct: 255 DVLPNV 260
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 42.3 bits (95), Expect = 4e-04
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Query: 98 EAFLLQFHVSITRRFRDMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFR 157
+A + T + +E + DV DG AH+AIL A K+MF
Sbjct: 136 DATMQSISTQTTLKCLSRMLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHHDLM 195
Query: 158 ESNSRVISLPGVKIYAFHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKV 217
E S I + + + LL Y+Y + L LL AN++ + L E +
Sbjct: 196 EKESSTIHIDDMSRESCMALLSYLYGNITQEEFWKHRLALLGAANKYDITDLKAACEESL 255
Query: 218 IEELRHKDRVRGHEDEVVEIALSLLEPAKVRQGIRLLSKVFERAVEREKRIGSYY 272
+E++ + + + + E L LE K+++G + F + + + I S++
Sbjct: 256 MEDINSSNVL----ERLQEAWLYQLE--KLKKGCLMYLFDFGKIYDVREEISSFF 304
>At3g51770.1 68416.m05677 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 958
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 124 DVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLP--GVKIYAFHILLCYM 181
D++F + D R + + P KAM G FRE I+ G+ + +
Sbjct: 250 DMSFCIGDEEVRCVRYKIASLSRPFKAMLYGGFREMKRATINFTQNGISVEGMRAAEIFS 309
Query: 182 YTDKIPSVESARCLELLELANRFCMNRL 209
T+++ + LELL+LANRFC + L
Sbjct: 310 RTNRLDNFPPNVVLELLKLANRFCCDEL 337
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to Speckle-type POZ protein (SP:O43791) [Homo
sapiens]
Length = 368
Score = 41.1 bits (92), Expect = 8e-04
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 109 TRRFRDMYVERNTFADVTFALDD-GIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLP 167
TR D + ADV DD G+ AH ++ D ++ M + H R+S+ + IS+
Sbjct: 41 TRDSWDRMFDEAHGADVLIHTDDNGLIYAHSNVIGMASDVIRGMMKQHKRKSHRKSISIL 100
Query: 168 GVKIYAFHILLCYMYTDKIPSVESAR-CLELLELANRFCMNRLVNLVEYKVIEELRHKDR 226
GV +A + + ++Y+ + + LL L++ + + L + E + L +K+
Sbjct: 101 GVPHHALRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYVVPHLKRVCESEFESSLLNKEN 160
Query: 227 V 227
V
Sbjct: 161 V 161
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 123 ADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMY 182
+D+TF + LAH+ +L AR K+ F F E+N+ +++ ++ F LL +MY
Sbjct: 198 SDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEF-EANNTEVTINDLEPKVFKALLQFMY 256
Query: 183 TDKIP-SVE--SARCLELLELA 201
D +P VE +A E L+L+
Sbjct: 257 KDSLPEDVEPATAHTFERLKLS 278
>At5g58550.1 68418.m07333 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 925
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 123 ADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLP--GVKIYAFHILLCY 180
+D++F + R+ + A P +AM G F ES + I G+ I A L Y
Sbjct: 207 SDISFCVGSEKAKCVRSRIAALSRPFEAMLYGSFVESTTSEIDFSENGISIEAMLALNIY 266
Query: 181 MYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEELRHKDRVRGHEDEVVEIALS 240
++ ELL+LA++FC + L + E ++ + D+ + +E +
Sbjct: 267 SRIKRVDLFRVETVFELLQLASKFCCDDLKSECEARLAASVTDLDKALTFVEYALEERTT 326
Query: 241 LLEPAKVRQGIRLL 254
LL A ++ +R L
Sbjct: 327 LLLSACLQVFLREL 340
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 136 AHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMYTDKIPSVESARCL 195
AH+++L++R KAM + ES S I + V A + Y+YT + E C
Sbjct: 82 AHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMAC- 140
Query: 196 ELLELANRFCMNRLVNLVEYKVIEEL 221
+LL ++ ++ + L + E ++ +L
Sbjct: 141 DLLVMSEKYQVKHLKSYCERFLVTKL 166
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 123 ADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMY 182
+DVTF + AH+ +L AR ++MF E+NS V+ + ++ F LL +MY
Sbjct: 205 SDVTFDVAGEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVV-ISDLEPKVFKALLHFMY 263
Query: 183 TDKIP 187
D +P
Sbjct: 264 KDSLP 268
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 122 FADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYM 181
+ D+T DG AHRA+L AR ++MF +E I++ + + A L Y+
Sbjct: 163 YTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELSEINVLDMPLDACQAFLSYI 222
Query: 182 YTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEELRHKD 225
Y + L LL+ A ++ + L +++++ K+
Sbjct: 223 YGNIQNEDFLIHRLALLQAAEKYDIADLKEACHLSLLDDIDTKN 266
>At1g04390.1 68414.m00429 expressed protein
Length = 849
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 136 AHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMYTDKIPSVES 191
+HR IL + C+ ++A+F+ +ES+ +++P V L+ + Y+D++P S
Sbjct: 683 SHRVILSSGCEYLRALFRSGMQESHLDRLNVP-VSWLGLTKLVSWFYSDELPKPPS 737
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 157 RESNSRVISLPGVKIYAFHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYK 216
R S+ VI L GV H LL Y+YT + +ES L +L+++F + LV E
Sbjct: 240 RSSDGDVIQLRGVSYPILHALLQYIYTGRTQILES-ELAPLRDLSSKFEVMSLVRQCEES 298
Query: 217 V 217
+
Sbjct: 299 I 299
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 157 RESNSRVISLPGVKIYAFHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYK 216
R S+ VI L GV H LL Y+YT + +ES L +L+++F + LV E
Sbjct: 240 RSSDGDVIQLRGVSYPILHALLQYIYTGRTQILES-ELAPLRDLSSKFEVMSLVRQCEES 298
Query: 217 V 217
+
Sbjct: 299 I 299
>At5g67385.1 68418.m08497 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 663
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 107 SITRRFRDMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISL 166
S +R + + +DVT + + H+ LM++C +K + ++S+S VI +
Sbjct: 11 SAMKRTSEWISSQEVSSDVTVHVGEASFSLHKFPLMSKCGFIKKLVSESSKDSDSTVIKI 70
Query: 167 P----GVKIYAFHILLCY--MYTDKIPSVESARC-LELLELANRFCMNRLV 210
P G + + CY + ++ RC E LE+ + LV
Sbjct: 71 PDIPGGSEAFELAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENLV 121
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 107 SITRRFRDMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQG 154
S++ F ++ + F+DVTF+++ + AHR IL AR + F G
Sbjct: 10 SLSLDFLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCG 57
>At1g63210.1 68414.m07144 hypothetical protein contains Pfam
profile: PF04283 protein of unknown function (DUF439)
Length = 1197
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 225 DRVRGHEDEVVEIALSLL--EPAKVRQGIRLLSKVFERAVEREKRIGSYYIVTHEPT--- 279
D VRG ED+ +E+A+ + EPA +R +++ + R+ +E + +Y ++ E +
Sbjct: 806 DTVRGDEDDAIEMAIEHVRDEPASLR---KIVLDEYLRSKNQENKKETYSLIMRELSCGF 862
Query: 280 -DWLFMFSE 287
DW +F E
Sbjct: 863 QDWRSLFKE 871
>At4g02680.1 68417.m00363 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 888
Score = 31.1 bits (67), Expect = 0.89
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 119 RNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPG--VKIYAFHI 176
R+ +V F + + R + + P AM G+F ES I + V A +
Sbjct: 176 RSVSKNVVFKIGEEKIACQRRKIASLSAPFHAMLYGNFTESLLDEIDMSENHVSSSAMRV 235
Query: 177 LLCYMYTDKIPSVESARCLELLELANRFCMNRL 209
+ + + V LE+L AN+FC RL
Sbjct: 236 VRDFSVVGVLIGVSKNLLLEVLVFANKFCCERL 268
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 117 VERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISL 166
+E ADVTF +D AH+ +L AR +A G R N+ + +
Sbjct: 196 LESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNSLEV 245
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 115 MYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAF 174
M +E +D+TF + AHR +L AR ++ F E + R I + ++ F
Sbjct: 208 MLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEED-RDIEVTDMEPKVF 266
Query: 175 HILLCYMYTDKI 186
LL Y+Y D +
Sbjct: 267 KALLHYIYKDAL 278
>At5g38830.1 68418.m04697 tRNA synthetase class I (C) family protein
similar to SP|Q06752 Cysteinyl-tRNA synthetase (EC
6.1.1.16) (Cysteine--tRNA ligase) (CysRS) {Bacillus
subtilis}; contains Pfam profile PF01406: tRNA
synthetases class I (C)
Length = 511
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 184 DKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEELRHKDRVRGHEDEVVEIALSLLE 243
DKI + + L+L+NRFC LV++ + + H+ RV H D ++++ ++E
Sbjct: 78 DKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPP-THQPRVSEHMDNIIKMIEKIIE 136
>At4g39430.1 68417.m05580 expressed protein ; expression supported
by MPSS
Length = 405
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 205 CMNRLV-----NLVEYKVIEELRHKDRVRGHEDEVVEIALSLLEPAKVRQG 250
C+N+LV + Y++ EE+R +R +ED V+E +SL+E K+ G
Sbjct: 302 CLNQLVFGTVRRSLRYQIAEEMRKLGFLRPYEDNVLE-RISLIEHLKIECG 351
>At3g48360.1 68416.m05278 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 30.7 bits (66), Expect = 1.2
Identities = 34/162 (20%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 123 ADVTFALDDGIHLAHRAILMARCDP-----MKAMFQGHFRESNSRVISLPGVKIYAFHIL 177
+DV D + + ++A P MK + + + RVI + GV A +
Sbjct: 34 SDVEIVTSDNRRIPAHSGVLASASPVLMNIMKKPMRRYRGCGSKRVIKILGVPCDAVSVF 93
Query: 178 LCYMYTDKIPSVESARC-LELLELANRFCMNRLVNLVEYKVIEELRHKDRVRGHEDEVVE 236
+ ++Y+ + E R + LL L++ + + +L V++ L ++ V +V++
Sbjct: 94 IKFLYSSSLTEDEMERYGIHLLALSHVYMVTQLKQRCSKGVVQRLTTENVV-----DVLQ 148
Query: 237 IALSLLEPAKVRQGIRLLSKVFERAVEREKRIGSYYIVTHEP 278
+A P + +RL+ F+ + E G +I H+P
Sbjct: 149 LARLCDAPDVCLRSMRLIHSQFKTVEQTE---GWKFIQEHDP 187
>At3g44060.1 68416.m04720 F-box family protein contains F-box domain
Pfam:PF00646
Length = 427
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 67 DNEIRQASELLGIPELTRTSQLILTQQMLYDEAFLLQFHVSITRRFRDMYVERNTFADVT 126
D+ + Q LL E TS L + L+ + L FH I+ R D+ N F D +
Sbjct: 6 DDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHDPISGRPEDILKSFNDFVDSS 65
Query: 127 FALDDGIHL 135
A G H+
Sbjct: 66 LAFQGGKHI 74
>At5g13260.1 68418.m01523 expressed protein
Length = 537
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 21 QLRNSRLEYHPESSPKHLRNDEHDNGHDNGRDNADPPESRYIQFNID 67
+LRN P ++PK + D GH NG+D+ D E+ ++ +D
Sbjct: 152 KLRNQTTNPLPVATPKTEKRVLADIGHFNGKDSKDQHEASALRDELD 198
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 107 SITRRFRDMYVERNTFADVTFALDDGIHLAHRAILMAR 144
S++ + ++ + F+DVTF+++ + AHR IL AR
Sbjct: 11 SMSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAAR 48
>At3g56300.1 68416.m06258 tRNA synthetase class I (C) family protein
similar to cysteinyl-tRNA synthetase [Methanococcus
maripaludis] GI:6599476; contains Pfam profile PF01406:
tRNA synthetases class I (C)
Length = 489
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 198 LELANRFCMNRLVNLVEYKVIEELRHKDRVRGHEDEVVEIALSLLE 243
L+L+NRFC L+++ + + H+ RV H ++++++ ++E
Sbjct: 91 LDLSNRFCEEYLLDMAALQCLLP-THQPRVSDHMEQIIKMIEKIIE 135
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 218 IEELRHKDRVRGHEDEVVEIALSLLEP--AKVRQGIRLLSKVFERAV 262
IEEL+HK R R E ++ +L+L E K+RQ I SK A+
Sbjct: 184 IEELKHKLRERDEERAALQSSLTLKEEELEKMRQEIANRSKEVSMAI 230
>At4g22270.1 68417.m03221 expressed protein
Length = 437
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 209 LVNLVEYKV---IEELRHKDRVRGHEDEVVEIALSLLEPAKVRQGIRLLSKVFERAV 262
++ + YK+ ++ LR D R E+ ++ +L E K+R+ +R++S F R +
Sbjct: 199 IIVCILYKITCHLQTLRLDDFARCFASEITDVRSALGEHQKIRRNLRIVSHRFRRFI 255
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 136 AHRAILMARCDPMKAMFQGHFRESNSRV--ISLPGVKIYAFHILLCYMYTDKIPSVESAR 193
AH+ IL AR + + MF+ +++S++ I+L +K + + Y+D E A+
Sbjct: 40 AHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTYSDGSMLSEKAK 99
Query: 194 --CLELLELANRFCMNRLVNLVEYKVIEELRHKDRVR 228
+ L A + + RL L ++I L + +R
Sbjct: 100 QHAMSLYSAAKDYEIPRLWCLCRKELIASLNMSNALR 136
>At3g08570.1 68416.m00994 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 612
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 124 DVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVI-----SLP-GVKIYAFHIL 177
D+T +D L H+ L+ARC ++ M +ES+S + P G K + +
Sbjct: 32 DITIVVDGESFLLHKFPLVARCGKIRKMV-AEMKESSSNLSHTELRDFPGGSKTFELAMK 90
Query: 178 LCY--MYTDKIPSVESARCLE-LLELANRFCMNRLVNLVE 214
CY + I +V + RC LE+ F L+ E
Sbjct: 91 FCYGINFEITISNVVAIRCAAGYLEMTEDFKEENLIARTE 130
>At2g27060.1 68415.m03251 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1007
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 171 IYAFHILLCYMYTDKIPS---VESARCLELLELANRFC-MNRLVNLVEYKVIEELRHKDR 226
+YAF ++L + T K+ +EL E NR + ++ ++
Sbjct: 907 VYAFGVILLELLTGKVSGDIVCSDPGVVELTEWVLLLVGQNRATECFDPSIVGSQGSRNP 966
Query: 227 VRGHEDEVVEIALSLLEPAKVRQGIRLLSKVFERAVEREKRI 268
G +V+++ALS + PA R ++L+S+ R V + I
Sbjct: 967 F-GVLTDVLQVALSCISPAPERPDMKLVSQELSRIVLKRTAI 1007
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 15 DIQVLYQLRNSRLEYHPESSPKHLRNDEHDNGHDNGRDNAD 55
D + +L + R P SP +DEHD D+ NAD
Sbjct: 62 DADLESELDHERYLDLPSESPSPSDDDEHDMNEDSANTNAD 102
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 15 DIQVLYQLRNSRLEYHPESSPKHLRNDEHDNGHDNGRDNAD 55
D + +L + R P SP +DEHD D+ NAD
Sbjct: 62 DADLESELDHERYLDLPSESPSPSDDDEHDMNEDSANTNAD 102
>At2g40290.2 68415.m04961 eukaryotic translation initiation factor 2
subunit 1, putative / eIF-2A, putative / eIF-2-alpha,
putative similar to Swiss-Prot:P05198 eukaryotic
translation initiation factor 2 subunit 1 (Eukaryotic
translation initiation factor 2 alpha subunit)
(eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]
Length = 241
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 177 LLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIE 219
L C MY K P V+ A +++ +A+ M V+L+EY IE
Sbjct: 8 LECRMYEAKYPEVDMAVMIQVKNIAD---MGAYVSLLEYNNIE 47
>At2g40290.1 68415.m04960 eukaryotic translation initiation factor 2
subunit 1, putative / eIF-2A, putative / eIF-2-alpha,
putative similar to Swiss-Prot:P05198 eukaryotic
translation initiation factor 2 subunit 1 (Eukaryotic
translation initiation factor 2 alpha subunit)
(eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]
Length = 344
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 177 LLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIE 219
L C MY K P V+ A +++ +A+ M V+L+EY IE
Sbjct: 8 LECRMYEAKYPEVDMAVMIQVKNIAD---MGAYVSLLEYNNIE 47
>At2g01450.1 68415.m00068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK17) mitogen-activated protein
kinase (MAPK)(AtMPK17), PMID:12119167
Length = 486
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 27 LEYHPESSPKHLRNDEHDNGH---DNGRDNADPPESRYIQFNIDNE 69
LEYHP+ ++L+ +E+ N H +G D +R + N D E
Sbjct: 348 LEYHPQMLQEYLQGEENINSHFLYPSGVDQFKQEFARLEEHNDDEE 393
>At1g04010.1 68414.m00387 lecithin:cholesterol acyltransferase
family protein / LACT family protein weak similarity to
SP|P40345 Phospholipid:diacylglycerol acyltransferase
(EC 2.3.1.158) (PDAT) {Saccharomyces cerevisiae};
contains Pfam profile PF02450: Lecithin:cholesterol
acyltransferase (phosphatidylcholine-sterol
acyltransferase)
Length = 629
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 9 WGGGIADIQVLYQLRNSRLEYHPE--SSPKHLR-NDEHDNGHDNGRDNADPPESRYIQFN 65
W G +I + Q+ +++ PE S H+ N +H++G D + P +YI F
Sbjct: 493 WLGPKVNITMAPQILIGKIKQQPEHDGSDVHVELNVDHEHGSDIIANMTKAPRVKYITFY 552
Query: 66 IDNE 69
D+E
Sbjct: 553 EDSE 556
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.139 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,670,329
Number of Sequences: 28952
Number of extensions: 273164
Number of successful extensions: 993
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 965
Number of HSP's gapped (non-prelim): 42
length of query: 287
length of database: 12,070,560
effective HSP length: 80
effective length of query: 207
effective length of database: 9,754,400
effective search space: 2019160800
effective search space used: 2019160800
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 59 (27.9 bits)
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