Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40096
(823 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 230 3e-59
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 140 3e-32
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 138 2e-31
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 132 8e-30
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 132 8e-30
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 132 1e-29
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 128 2e-28
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 124 4e-27
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 118 2e-25
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 118 2e-25
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 117 3e-25
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 116 9e-25
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 113 7e-24
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 113 7e-24
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 111 3e-23
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 103 5e-21
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 103 7e-21
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 99 7e-20
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 99 2e-19
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 97 6e-19
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 96 8e-19
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 96 8e-19
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 96 8e-19
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 93 6e-18
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 93 6e-18
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 91 3e-17
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 91 4e-17
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 87 4e-16
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 87 4e-16
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 84 5e-15
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 76 9e-13
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 69 1e-10
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 69 2e-10
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 66 1e-09
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 64 5e-09
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 63 7e-09
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 63 9e-09
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 62 2e-08
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 60 9e-08
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 60 9e-08
UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein ... 50 9e-05
UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina... 48 2e-04
UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family prot... 45 0.002
UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonucleas... 45 0.002
UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphag... 45 0.002
UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus elo... 44 0.005
UniRef50_A5YS39 Cluster: DNA double-strand break repair protein ... 44 0.006
UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein ... 44 0.006
UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1; Methanococ... 43 0.008
UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=... 43 0.011
UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1; ... 42 0.014
UniRef50_O29231 Cluster: DNA double-strand break repair protein ... 41 0.033
UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeu... 40 0.075
UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3; Thermotoga|... 39 0.17
UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1; A... 39 0.17
UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein ... 39 0.17
UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter... 38 0.23
UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n... 38 0.30
UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus... 38 0.30
UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix ... 38 0.40
UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1; Ign... 37 0.53
UniRef50_O26641 Cluster: DNA double-strand break repair protein ... 37 0.53
UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=... 37 0.70
UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein ... 37 0.70
UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Re... 36 0.93
UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=... 36 0.93
UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4; Lactobacil... 36 0.93
UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia intestin... 36 0.93
UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein ... 36 0.93
UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1; Clostri... 36 1.2
UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein ... 36 1.2
UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3; Clostri... 36 1.6
UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein ... 36 1.6
UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6; S... 35 2.1
UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1; Halothermo... 35 2.1
UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16; Staphyloc... 35 2.1
UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilu... 35 2.1
UniRef50_P62132 Cluster: DNA double-strand break repair protein ... 35 2.1
UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1; Metallosph... 35 2.8
UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1; Symbiobact... 34 3.7
UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus thermoph... 34 3.7
UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2; Thermoplasmata... 34 3.7
UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1; ... 34 4.9
UniRef50_Q2S5E8 Cluster: Outer membrane protein, putative; n=1; ... 34 4.9
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 34 4.9
UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1; Fervidobac... 34 4.9
UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1; Anaerom... 34 4.9
UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.9
UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3; ... 34 4.9
UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2; Lactobacillales|... 33 6.5
UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=... 33 6.5
UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein; ... 33 6.5
UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus... 33 6.5
UniRef50_Q6CKL0 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 33 6.5
UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative ... 33 8.6
UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillu... 33 8.6
UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella t... 33 8.6
UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 230 bits (563), Expect = 3e-59
Identities = 114/147 (77%), Positives = 120/147 (81%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNH 436
KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNH
Sbjct: 68 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNH 127
Query: 437 DDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQRL 616
DDPVGQGSVSSLDILSITGLVNYF +K L GLSHLKDQRL
Sbjct: 128 DDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRL 187
Query: 617 SRLFAEKKVEMERPDETLGLGSIYLYY 697
SRLFAEKKVEMERPDETL ++++ +
Sbjct: 188 SRLFAEKKVEMERPDETLDWFNLFVLH 214
Score = 140 bits (338), Expect = 5e-32
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +3
Query: 57 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 236
MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG
Sbjct: 1 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 60
Query: 237 GDLFDQ 254
GDLFDQ
Sbjct: 61 GDLFDQ 66
Score = 113 bits (272), Expect = 5e-24
Identities = 64/106 (60%), Positives = 66/106 (62%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFH 684
F KWTDYTHVRISPVLLQKGLTRLALYG K F KK E F+
Sbjct: 151 FGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKV-EMERPDETLDWFN 209
Query: 685 LFVLHPNHADRGHSNYIPEGVLPTFRL*CGGLSMIALFVPWKGN*T 822
LFVLH NHADRGHSNYIPEGVLPTFR G + P KGN T
Sbjct: 210 LFVLHQNHADRGHSNYIPEGVLPTFRSVVWGHEHDSHICPMKGNKT 255
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 140 bits (340), Expect = 3e-32
Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF--SRTVNYEDPNLNISYPILSIHG 430
+P+ +C+ K E+IRKYC GDKPV IE SD +F + +VNYEDPN+N+S PI SIHG
Sbjct: 62 RPTPHCIKKTIELIRKYCFGDKPVEIEFFSDPSLHFPGNASVNYEDPNINVSIPIFSIHG 121
Query: 431 NHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQ 610
NHDDP G+ VS+LD+ S GLVNYF E + KK GLSH++D+
Sbjct: 122 NHDDPTGKNHVSALDLFSSMGLVNYFGRWDDVTKVEINPILLKKGDSKLALYGLSHIRDE 181
Query: 611 RLSRLFAEKKVEMERPDE 664
RL+RLF +KKV + P++
Sbjct: 182 RLARLFLDKKVVTKTPED 199
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 84 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
S +T RIL+A+D+HLG+ N+ +R D+F FEE+L +A + VD ILLGGDLF +
Sbjct: 4 SEANTFRILLATDLHLGYGLNNSIRENDTFRTFEEILQIANKEKVDFILLGGDLFHE 60
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFH 684
F +W D T V I+P+LL+KG ++LALYG + F KK +T ++ F+
Sbjct: 147 FGRWDDVTKVEINPILLKKGDSKLALYGLSHIRDERLARLFLDKKVVT-KTPEDLNDWFN 205
Query: 685 LFVLHPNHADRGHSNYIPEGVLPTF 759
+F+LH N A+RG N+I + +P F
Sbjct: 206 VFILHQNRANRGAKNFIADSFIPEF 230
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 138 bits (334), Expect = 2e-31
Identities = 67/140 (47%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIH 427
KPS +C+++ E+ RKYCLGD PV I+ LSDQ NFS TVNYEDPN NIS PI SIH
Sbjct: 96 KPSRSCLYRTMELFRKYCLGDSPVRIQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIH 155
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDDP G+G +++LD+LS++ LVNYF + K GL +++D
Sbjct: 156 GNHDDPTGEGGLAALDLLSVSNLVNYFGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRD 215
Query: 608 QRLSRLFAEKKVEMERPDET 667
+RL R F ++ V++ RP E+
Sbjct: 216 ERLHRTFQKQSVKLMRPVES 235
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLLSIVC 278
+RIL+A+D HLG++E DP+RG+DSF +FEE+L A VD++LLGGDLF N S C
Sbjct: 43 MRILVATDNHLGYLERDPIRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHD-NKPSRSC 101
Query: 279 L 281
L
Sbjct: 102 L 102
Score = 36.3 bits (80), Expect = 0.93
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFH 684
F K D + + P+LL KG T++A+YG + +F + + F+
Sbjct: 182 FGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRDERLHRTFQKQSVKLMRPVESKDEWFN 241
Query: 685 LFVLHPNHADRGHSNYIPEGVLPTF 759
+ VLH N NY+ E ++ +F
Sbjct: 242 ILVLHQNRVAHNPKNYVHEKMIESF 266
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 132 bits (320), Expect = 8e-30
Identities = 69/152 (45%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Frame = +2
Query: 254 TKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILS 421
TKPS + +C E++RKYCLG K + I+ LSD F +TVNYEDPNLNIS PI S
Sbjct: 73 TKPSQTAILRCMELLRKYCLGTKEIKIQFLSDPEVIFRHCAYKTVNYEDPNLNISMPIFS 132
Query: 422 IHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHL 601
IHGNHDDP G++ S+D+LS++GL+NYF KK GLS++
Sbjct: 133 IHGNHDDP-SFGAIGSMDLLSVSGLINYFGKWTDLTKINIPPLIIKKGETHIALYGLSYI 191
Query: 602 KDQRLSRLFAEKKVEMERPDETLGLGSIYLYY 697
DQRLSRL + K++M RP E +I++ +
Sbjct: 192 NDQRLSRLLRDFKIDMLRPTEITDCFNIFVLH 223
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +3
Query: 48 SKIMIENDISAWSPDDTLRILIASDIHLGFMENDP--VRGEDSFIAFEEVLSLAVQCDVD 221
S I N +PDD+++ILIA+DIHLGF N + EDSFI FEE+L + +VD
Sbjct: 2 SSTPINNKNEKRNPDDSIKILIATDIHLGFEYNKKRGQQSEDSFITFEEILQYGKEYEVD 61
Query: 222 LILLGGDLF 248
ILLGGDLF
Sbjct: 62 FILLGGDLF 70
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 132 bits (320), Expect = 8e-30
Identities = 67/138 (48%), Positives = 89/138 (64%), Gaps = 4/138 (2%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISYPILSIH 427
PS N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+ P+ SIH
Sbjct: 69 PSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSIH 128
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDDP G G +SSLD+LS +GLVNYF E +K GLSH+ D
Sbjct: 129 GNHDDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHD 188
Query: 608 QRLSRLFAEKKVEMERPD 661
RL+RL + KV+ P+
Sbjct: 189 GRLARLIKDFKVKFNCPE 206
Score = 80.2 bits (189), Expect = 6e-14
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGDLF
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLF 64
Score = 65.3 bits (152), Expect = 2e-09
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PF---KRSETFTSF-----C*KKSGNGETR 660
F +WTD T V ISPVL++KG ++LALYG + + F C + NGE
Sbjct: 155 FGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRLARLIKDFKVKFNCPENVANGEDG 214
Query: 661 *NIGTG---FHLFVLHPNHADRGHSNYIPEGVLPTF 759
FHL V+H N ADRG NY+PE +LP+F
Sbjct: 215 NESKEEEDWFHLLVVHQNRADRGPKNYLPEDLLPSF 250
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 132 bits (319), Expect = 1e-29
Identities = 65/140 (46%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILSI 424
KP N + KC E++R YCL DKPV I+ L+D FS + VN+EDPNLN+ P+ SI
Sbjct: 89 KPPHNVVMKCLELLRTYCLNDKPVKIQFLTDPEAVFSHCAQKVVNFEDPNLNVGIPVFSI 148
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G G+V S+D+LS TGL+NYF +K + GLS++
Sbjct: 149 HGNHDDPTGYGAVGSMDVLSATGLINYFGKWTDVTQVSIAPLLIRKGVTTIALYGLSYMN 208
Query: 605 DQRLSRLFAEKKVEMERPDE 664
DQRLSRL K M R D+
Sbjct: 209 DQRLSRLMRNNKFHMLRTDK 228
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFH 684
F KWTD T V I+P+L++KG+T +ALYG + + + + F+
Sbjct: 176 FGKWTDVTQVSIAPLLIRKGVTTIALYGL-SYMNDQRLSRLMRNNKFHMLRTDKADDPFN 234
Query: 685 LFVLHPNHADRGHSNYIPEGVLPTF 759
+FVLH N A ++Y+PE +LP F
Sbjct: 235 IFVLHQNRAMHSQNSYVPENLLPDF 259
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
++ +++LIA+DIHLG+ E R +DSF FEE+L A +VD++LLGGDLF +
Sbjct: 34 ENIMKVLIATDIHLGY-EQTTKREDDSFRTFEEILQYARDHEVDMVLLGGDLFHE 87
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 128 bits (308), Expect = 2e-28
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS P+ SI
Sbjct: 66 KPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSI 125
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G ++ +LDILS G VN+F + + +K GL +
Sbjct: 126 HGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIP 185
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R+F KKV M RP E
Sbjct: 186 DERLYRMFVNKKVTMLRPKE 205
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 78 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGDLF +
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHE 64
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ ISPVLLQKG T++ALYG + F KK + + + F+LFV+H N +
Sbjct: 162 IDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRS 221
Query: 712 DRGHSNYIPEGVLPTF 759
G +N+IPE L F
Sbjct: 222 KHGSTNFIPEQFLDDF 237
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 124 bits (298), Expect = 4e-27
Identities = 61/140 (43%), Positives = 82/140 (58%), Gaps = 4/140 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS + + RK+C+GD+ +E LSDQ NF+ VNYEDPNLN+S P+ SI
Sbjct: 104 KPSRRTLHASMALFRKFCMGDRVCEVEFLSDQSINFANNRFPWVNYEDPNLNVSIPVFSI 163
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G+G++ +LD+LS+ GLVNYF + +K GL ++
Sbjct: 164 HGNHDDPAGEGNLCALDLLSVCGLVNYFGRPASVDDITVSPLLLQKGATKLALYGLGSVR 223
Query: 605 DQRLSRLFAEKKVEMERPDE 664
D+RL R F KV+M RP E
Sbjct: 224 DERLHRTFVNNKVKMLRPKE 243
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+TL ILIA+D+HLG+ E D VRG DSF+ FEE L +A + +VD ILLGGDL+ +
Sbjct: 49 NTLSILIATDVHLGYAEKDQVRGNDSFVTFEETLQIAKKRNVDFILLGGDLYHE 102
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNHA 711
+ +SP+LLQKG T+LALYG + +F K + + + F+ FVLH N A
Sbjct: 200 ITVSPLLLQKGATKLALYGLGSVRDERLHRTFVNNKVKMLRPKEDPDSWFNAFVLHQNRA 259
Query: 712 DRGHSNYIPEGVLPTF 759
GH+NYIPE L TF
Sbjct: 260 KHGHTNYIPEKFLDTF 275
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 118 bits (284), Expect = 2e-25
Identities = 60/142 (42%), Positives = 91/142 (64%), Gaps = 8/142 (5%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIH 427
KP+ M+ + +R C+GD+P +ELLS+ + S VNYEDPNLNIS P+ +I+
Sbjct: 67 KPTKKSMYHVMKSLRANCMGDRPCELELLSEPGETMSNGFDEVNYEDPNLNISVPVFAIN 126
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVL--RGSPSM---GL 592
GNHDD G+G +S+LD+L+++GL+NYF TR + Y K +L +GS G+
Sbjct: 127 GNHDDATGEGMLSALDVLAVSGLINYF---GKTRDNNHDTYLVKPILLQKGSTKFALYGM 183
Query: 593 SHLKDQRLSRLFAEKKVEMERP 658
S+++D++L RLF + +V ERP
Sbjct: 184 SNVRDEKLHRLFRDGEVRFERP 205
Score = 70.5 bits (165), Expect = 5e-11
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
DTL+IL+ +D H+G++ENDP+RG+DS+ F+E+ LA DVD+I+ GGDLF
Sbjct: 12 DTLKILLTTDNHVGYLENDPIRGDDSWKTFDEITRLARDHDVDMIIQGGDLF 63
Score = 38.3 bits (85), Expect = 0.23
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 505 FCKWTDYTH--VRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTG 678
F K D H + P+LLQKG T+ ALYG + + F + +
Sbjct: 153 FGKTRDNNHDTYLVKPILLQKGSTKFALYGMSNVRDEKLHRLFRDGEVRFERPGLHTDEW 212
Query: 679 FHLFVLHPNHADRGHSNYIPEGVLPTF 759
F+ H NHA + IPE LP F
Sbjct: 213 FNFLAFHQNHAVHTFKSSIPENYLPHF 239
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 118 bits (284), Expect = 2e-25
Identities = 60/139 (43%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISYPILSI 424
KPS +++ +R CLGDKP +ELLSD T +NY DPN+N++ P+ SI
Sbjct: 71 KPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSI 130
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDP G G S+LDIL +TGLVNYF P +K G+S+++
Sbjct: 131 HGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVR 190
Query: 605 DQRLSRLFAEKKVEMERPD 661
D+RL F E KV+ RPD
Sbjct: 191 DERLYHSFRENKVKFLRPD 209
Score = 76.2 bits (179), Expect = 9e-13
Identities = 32/53 (60%), Positives = 45/53 (84%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
++T+RILI+SD H+G+ E DPVRG DSF++F E+L +A + DVD+ILLGGD+F
Sbjct: 15 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIF 67
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 529 HVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNH 708
++ +SP+LLQKG T+LALYG + + SF K F+L +H NH
Sbjct: 166 NIVVSPILLQKGFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNH 225
Query: 709 ADRGHSNYIPEGVLPTF 759
+ ++Y+PE + F
Sbjct: 226 SAHTPTSYLPESFIQDF 242
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 117 bits (282), Expect = 3e-25
Identities = 58/139 (41%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIH 427
KPS M++ +RK+CLG KP +E LSD + F VNYEDP++N++ P+ SIH
Sbjct: 83 KPSRKSMYQVMRSLRKHCLGMKPCELEFLSDAAEVFEGAFPFVNYEDPDINVAIPVFSIH 142
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDDP G G SLD+L GLVNYF P +K GLS+++D
Sbjct: 143 GNHDDPSGDGHYCSLDLLQAAGLVNYFGRVPEADNIHVKPILLQKGRTKMALYGLSNVRD 202
Query: 608 QRLSRLFAEKKVEMERPDE 664
+R+ R F + KV RP++
Sbjct: 203 ERMHRTFRDNKVRFYRPNQ 221
Score = 67.3 bits (157), Expect = 4e-10
Identities = 27/54 (50%), Positives = 43/54 (79%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
DT+RIL+++D H+G+ E PVR +DS+ F+E++ +A + DVD++LLGGDLF +
Sbjct: 28 DTIRILVSTDNHVGYAERHPVRKDDSWRTFDEIMQIAKKQDVDMVLLGGDLFHE 81
Score = 46.4 bits (105), Expect = 9e-04
Identities = 24/77 (31%), Positives = 37/77 (48%)
Frame = +1
Query: 529 HVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNH 708
++ + P+LLQKG T++ALYG + +F K F+L LH NH
Sbjct: 177 NIHVKPILLQKGRTKMALYGLSNVRDERMHRTFRDNKVRFYRPNQQKNDWFNLLALHQNH 236
Query: 709 ADRGHSNYIPEGVLPTF 759
++Y+ E +LP F
Sbjct: 237 YAHTRTSYVAENMLPDF 253
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 116 bits (278), Expect = 9e-25
Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIH 427
KPS M++ IR CLGDKP +E+LSD +NF VNYED ++N++ PI SIH
Sbjct: 80 KPSRKSMYQVMRSIRMNCLGDKPCELEMLSDASENFQGAFNHVNYEDLDINVAIPIFSIH 139
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDDP G+G +++LD+L ++GL+NY+ P + +K G+S+++D
Sbjct: 140 GNHDDPSGEGHLAALDLLQVSGLLNYYGRTPESDNIHIKPVLLQKGRTKLALYGMSNVRD 199
Query: 608 QRLSRLFAEKKVEMERP 658
+RL R F + KV+ +P
Sbjct: 200 ERLFRTFRDGKVKFYQP 216
Score = 70.1 bits (164), Expect = 6e-11
Identities = 29/54 (53%), Positives = 44/54 (81%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+T+RIL+A+D H+G+ E DP+RG+DS+ +F EV+ LA + DVD++LL GDLF +
Sbjct: 25 ETIRILVATDNHVGYNERDPIRGDDSWKSFHEVMCLARERDVDMVLLAGDLFHE 78
Score = 49.6 bits (113), Expect = 9e-05
Identities = 28/77 (36%), Positives = 38/77 (49%)
Frame = +1
Query: 529 HVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNH 708
++ I PVLLQKG T+LALYG + F +F K + F+L +H NH
Sbjct: 174 NIHIKPVLLQKGRTKLALYGMSNVRDERLFRTFRDGKVKFYQPSIQKNDWFNLMCVHQNH 233
Query: 709 ADRGHSNYIPEGVLPTF 759
+ Y+PE LP F
Sbjct: 234 HAYTETGYLPENFLPEF 250
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 113 bits (271), Expect = 7e-24
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYPILSI 424
KPS+ C+ + + ++R Y LGDKP+S LLSD +NF N++DPN+N++ PI I
Sbjct: 92 KPSLGCLARTSSLLRSYVLGDKPISFTLLSDPKRNFPTHPVPLANFQDPNINVALPIFMI 151
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDPV G SS+DILS GLVNYF + + KK GL +++
Sbjct: 152 HGNHDDPV--GGTSSIDILSTAGLVNYFGHTSSLDDIVVEPVLLKKGDTYIALYGLGNVR 209
Query: 605 DQRLSRLFAEKKVEMERP 658
D RL R F KK+ +P
Sbjct: 210 DDRLHRCFRMKKLHFVQP 227
Score = 57.6 bits (133), Expect = 4e-07
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 96 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQLNLLSI 272
T + L+ SD HLG+ E D RG+DSF FEE L A ++ +VD ILL GD F N S+
Sbjct: 37 TFKFLVTSDNHLGYQERDSRRGDDSFTTFEECLRAARLEHEVDAILLAGDFFHD-NKPSL 95
Query: 273 VCL 281
CL
Sbjct: 96 GCL 98
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 113 bits (271), Expect = 7e-24
Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIH 427
KPS + K EI+R++CL DKPV +++SDQ NF VNYEDP+ N+ P+ SIH
Sbjct: 63 KPSRTTLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIH 122
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYF----VNGPTTRT*EYHQYFCKKVLRGSPSMGLS 595
GNHDDP G ++S++DILS LVNYF + G + KK GL
Sbjct: 123 GNHDDPAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQITLYPILMKKGSTTVALYGLG 182
Query: 596 HLKDQRLSRLF-AEKKVEMERPD 661
+++D+RL+R+F V+ RP+
Sbjct: 183 NIRDERLNRMFQTPHAVQWMRPE 205
Score = 73.7 bits (173), Expect = 5e-12
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
DTLR+L+A+D HLG+ME D +R DSF AFEE+ S+A + VD +LLGGDLF +
Sbjct: 8 DTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHE 61
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 111 bits (266), Expect = 3e-23
Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYPILSIH 427
KPS M+K + +R CLGD+P +ELL D + TVNYEDPN+NIS P+ +I
Sbjct: 67 KPSKKSMYKVIKSLRTNCLGDRPCELELLGDPSMALGKDVDTVNYEDPNINISVPVFAIS 126
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDD G+G + LD+LS +GL+N+F P +K GL++++D
Sbjct: 127 GNHDDATGEGFLLPLDLLSASGLINHFGKVPNNEELTVSPLIFQKGASKLALYGLANVRD 186
Query: 608 QRLSRLFAEKKVEMERP 658
+RL RLF + V+ RP
Sbjct: 187 ERLHRLFRDGNVKFLRP 203
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 84 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
S DT+RILI +D H+G+ ENDP+RG+DS+ FEE+ S+A + DVD+IL GGDLF
Sbjct: 9 SGPDTIRILITTDNHVGYNENDPIRGDDSWKTFEEITSIAKEKDVDMILQGGDLF 63
Score = 39.9 bits (89), Expect = 0.075
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGE---TR*NIGT 675
F K + + +SP++ QKG ++LALYG + F + GN +
Sbjct: 153 FGKVPNNEELTVSPLIFQKGASKLALYGLANVRDERLHRLF---RDGNVKFLRPSSQADE 209
Query: 676 GFHLFVLHPNHADRGHSNYIPEGVLPTF 759
F++ +H NH ++Y+PE LP F
Sbjct: 210 WFNILCVHQNHVPHTRTSYLPEQFLPKF 237
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 103 bits (247), Expect = 5e-21
Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 16/152 (10%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSD----QIKNFS-RTVNYEDPNLNISYPILS 421
KPS +C+++ ++R+Y LGDKP+ +ELLSD + FS +NYEDPN NIS P+ S
Sbjct: 76 KPSRDCLYQTLALLREYTLGDKPIQVELLSDPDEGKAAGFSFPAINYEDPNFNISIPVFS 135
Query: 422 IHGNHDDPVG---QGSVSSLDILSITGLVNYF--VNGPTTRT*EYHQYFC-KKVL--RGS 577
IHGNHDDP G G++ +LD+LS++GL+NY + PT+ + VL +GS
Sbjct: 136 IHGNHDDPQGPGVNGALCALDVLSVSGLLNYMGKFDLPTSDADAATTGIAVRPVLLRKGS 195
Query: 578 PSMGL---SHLKDQRLSRLFAEKKVEMERPDE 664
+G+ ++KDQR+ +V M P +
Sbjct: 196 TKLGMYGVGNVKDQRMHFELRSNRVRMYMPKD 227
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +3
Query: 69 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
+I P+DT++IL+A+D H+G++E DP+RG+DS F E+L LAV+ +VD ILL GDLF
Sbjct: 13 NIETADPEDTIKILLATDNHIGYLERDPIRGQDSINTFREILQLAVKNEVDFILLAGDLF 72
Query: 249 DQLNLLSIVCL 281
+ N S CL
Sbjct: 73 HE-NKPSRDCL 82
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 103 bits (246), Expect = 7e-21
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYPILSI 424
KPS+ C+ + + RKY G+K V LLSD NF N++DPN+N++ P+ +I
Sbjct: 60 KPSLGCLVRACSLFRKYVFGNKTVPFSLLSDAATNFPTHALPMANFQDPNINVALPVFAI 119
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
HGNHDDPV G SSLD+L+ G +NYF + + +K GL +++
Sbjct: 120 HGNHDDPV--GGTSSLDLLATNGYLNYFGHVTSLDDIILEPVLLRKGSTFIALYGLGNVR 177
Query: 605 DQRLSRLFAEKKVEMERPDETLG 673
D+RL R F KKV++ P G
Sbjct: 178 DERLHRCFRLKKVQLVYPKPVPG 200
Score = 66.9 bits (156), Expect = 6e-10
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +3
Query: 96 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDLFDQLNLLSI 272
T + L+ +D HLGF E DP RG+DSF FEEVL A + DVD +LLGGDLF + N S+
Sbjct: 5 TFKFLLTTDNHLGFAERDPRRGDDSFTTFEEVLRAARTEHDVDAMLLGGDLFHE-NKPSL 63
Query: 273 VCL 281
CL
Sbjct: 64 GCL 66
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 99 bits (238), Expect = 7e-20
Identities = 48/93 (51%), Positives = 67/93 (72%), Gaps = 9/93 (9%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQI------KNFSRTVNYEDPNLNISYPIL 418
KPS + + + ++R+Y LGDKP+S+ELLSD K F +NYEDPNLN++ P+
Sbjct: 164 KPSRDTLHQTMALLRQYTLGDKPISVELLSDPNDGALPGKRFP-AINYEDPNLNVAIPVF 222
Query: 419 SIHGNHDDPVG---QGSVSSLDILSITGLVNYF 508
SIHGNHDDP G G++S+LD+LS++GL+NYF
Sbjct: 223 SIHGNHDDPQGVGETGALSALDLLSVSGLINYF 255
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +3
Query: 75 SAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+A S DD ++I++A+D H+G+ME DPVRG+DS FEE+L LAVQ DVDLILLGGDLF +
Sbjct: 103 AAQSEDDHIKIMLATDNHIGYMERDPVRGQDSIRTFEEILQLAVQHDVDLILLGGDLFHE 162
Score = 35.9 bits (79), Expect = 1.2
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYG 588
+RI PVLLQKG TRLALYG
Sbjct: 285 IRIKPVLLQKGETRLALYG 303
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 98.7 bits (235), Expect = 2e-19
Identities = 46/92 (50%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKN----FS-RTVNYEDPNLNISYPILS 421
+PS CM + ++R++ LGDKP+ ELLSD + FS VNYEDPN+NI+ P+ S
Sbjct: 86 RPSRTCMHQTIALLREFTLGDKPIEFELLSDPMDGSTPGFSFPAVNYEDPNINIAIPVFS 145
Query: 422 IHGNHDDPVG---QGSVSSLDILSITGLVNYF 508
IHGNHDDP G +G++ +LD+LS++G++NYF
Sbjct: 146 IHGNHDDPQGTGPEGALCALDVLSVSGVLNYF 177
Score = 69.7 bits (163), Expect = 8e-11
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +3
Query: 63 ENDISAWSPD--DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 236
E +S PD + RILIA+D H+G+ E DPVRG+DS F E+L LA DVD ILL
Sbjct: 19 EPPLSIVEPDLENCFRILIATDNHIGYAEKDPVRGQDSINTFREILELARDHDVDFILLA 78
Query: 237 GDLFDQLNLLSIVCLN 284
GDLF + N S C++
Sbjct: 79 GDLFHE-NRPSRTCMH 93
Score = 37.5 bits (83), Expect = 0.40
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 532 VRISPVLLQKGLTRLALYGT*PFKRSETFTSF-C*KKSGNGETR*NI--GTGFHLFVLHP 702
++I PVLL+KG T +ALYG + + K T N+ F++ ++H
Sbjct: 196 IQIRPVLLRKGTTHVALYGCGNIRDQRMYQELRANKVKMFMPTGGNVPDSDWFNILLVHQ 255
Query: 703 NHADRGHSNYIPEGV 747
N G NY+PE +
Sbjct: 256 NRVRHGPQNYVPENM 270
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 96.7 bits (230), Expect = 6e-19
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYPILSIH 427
KPS++ + K EIIR YCL D V +++SDQ ++N VN+EDPN NI P+ ++H
Sbjct: 69 KPSISTLVKSMEIIRSYCLNDHQVQFQVVSDQAACLQNRFGRVNFEDPNFNIGLPVFTVH 128
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYF--VNGPTTRT*EYH--QYFCKKVLRGSPSMGLS 595
G HD P G +S+ DILS VNYF V+ ++ + F KK GL
Sbjct: 129 GTHDGPAGVDGLSATDILSACNFVNYFGKVDPGSSDVDQISVCPVFIKKGATSVALYGLG 188
Query: 596 HLKDQRLSRLF-AEKKVEMERPDETLGLGSIYLYY 697
+++D++LSR+ K++ + D ++++++
Sbjct: 189 NIRDEKLSRMLQTHYKIQWMKADSEDDWFNLFVFH 223
Score = 66.5 bits (155), Expect = 8e-10
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 SAWSPDDT--LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
++W ++ LRIL+A+D HLG++E D +R DSF FEE+ SLAV VD ILLGG+LF
Sbjct: 6 ASWDEEENSMLRILVATDCHLGYLEKDEIRRFDSFDTFEEICSLAVINKVDFILLGGNLF 65
Query: 249 DQ 254
+
Sbjct: 66 HE 67
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 96.3 bits (229), Expect = 8e-19
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISYPILSIH 427
P +N + +C ++RKYCL DKP I+ L+D F+ + N++DP LNI PI +IH
Sbjct: 80 PPLNVITRCISLLRKYCLSDKPAKIDCLTDPEWIFNHCPDKIANFKDPKLNIGMPIFAIH 139
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
G+ D P+ G V +LD+L+ TGL+NYF P +K + GL+H+ D
Sbjct: 140 GHRDAPL-FGPVGALDLLAATGLINYFGKWPDKDKISIPPVLLRKGITTLALYGLNHMND 198
Query: 608 QRLSRLFAEKKVEMERPDETL 670
+L++ K+E+ + +ET+
Sbjct: 199 HKLTKCIKRDKLELLQ-EETI 218
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
++ +++L+A+DI+LG+ E R +DSF FEE+L A +VD IL G+LF + N
Sbjct: 24 ENIIQVLVAADINLGY-EQTVKREDDSFRTFEEILIYARDYEVDAILFAGNLFYEAN 79
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep:
Mre11 protein - Ostreococcus tauri
Length = 1229
Score = 96.3 bits (229), Expect = 8e-19
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 19/156 (12%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTV--------------NYEDPN 394
KPS + +C +++R+ GD V IE+LSD +NF V NYEDP+
Sbjct: 531 KPSRETLVRCMDVLREATRGDGAVRIEVLSDTKENFPHRVHSPDGDVRPHAGIVNYEDPH 590
Query: 395 LNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYF----VNGPTTRT*EYHQYFCKK 562
N+ P+ SIHGNHDDP G+ ++S++D+L+ G+VNYF + G T + +K
Sbjct: 591 TNVELPVFSIHGNHDDPAGERNLSAMDVLASAGVVNYFGKHALAGGGTGNVDLKPVLLRK 650
Query: 563 VLRGSPSMGLSHLKDQRLSRLFAEKK-VEMERPDET 667
GL +++D RL ++F+ K V RP ET
Sbjct: 651 GTTKVALYGLGYIRDNRLHQMFSVKGCVRWHRPAET 686
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 87 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
PD +TLR+L+A+D HLGF E D VR +D+F AFEE+ A + D + + GD+FD
Sbjct: 473 PDPNTLRVLVATDTHLGFAERDAVRKDDAFAAFEEIFRHAREQKCDCVFMAGDVFD 528
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 96.3 bits (229), Expect = 8e-19
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIH 427
KPS M++ +R C G++P +ELLSD +T +NYEDPN+N+S P+ +I
Sbjct: 62 KPSRKSMYQVIRSLRMNCYGERPCELELLSDPTLALDQTFNHLNYEDPNINVSVPVFAIS 121
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDD G + D+L+ TGL+N+F +K GL++++D
Sbjct: 122 GNHDDSGGDAMLCPNDVLAATGLINHFGRVTQNDQITVTPLLFRKGSTNLALYGLANVRD 181
Query: 608 QRLSRLFAEKKVEMERPDE 664
+RL R FA VE RP +
Sbjct: 182 ERLFRTFASGNVEFLRPQD 200
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
DT+RILI +D H+G+ E DP+RG+DS+ F E++ LA DVD++L GDLF
Sbjct: 7 DTIRILITTDNHVGYNEQDPIRGDDSWKTFHEIMGLARTEDVDMVLQAGDLF 58
Score = 43.6 bits (98), Expect = 0.006
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGE--TR*NIGTG 678
F + T + ++P+L +KG T LALYG + F +F SGN E +
Sbjct: 148 FGRVTQNDQITVTPLLFRKGSTNLALYGLANVRDERLFRTFA---SGNVEFLRPQDDQAW 204
Query: 679 FHLFVLHPNHADRGHSNYIPEGVLPTF 759
F L +H N A ++Y+P LP F
Sbjct: 205 FSLLAVHQNRASHTETSYLPGNFLPQF 231
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 93.5 bits (222), Expect = 6e-18
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYPILSIH 427
KPS +++ + +R CLGD+P +EL+SD + VNYED N NI P+ +I
Sbjct: 67 KPSKKSLYQVIKSLRSNCLGDRPCELELISDPSMALTLDFPGVNYEDENFNIGVPVFAIS 126
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDD G + LDIL+ +GLVNYF KK G+ ++KD
Sbjct: 127 GNHDDATGDSLLLPLDILAASGLVNYFGKVVNNEDITVAPLLFKKGTTKLALYGIGNVKD 186
Query: 608 QRLSRLFAEKKVEMERPDE 664
+RL R+F + K R +
Sbjct: 187 ERLHRVFRDNKATFLRSSD 205
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
+T+ ILI +D H+G+ ENDP+RG+DS FEE+ +A + DVD+++ GGDLF
Sbjct: 12 NTISILITTDNHVGYHENDPIRGDDSGKTFEEITRIAKERDVDMVVQGGDLF 63
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFH 684
F K + + ++P+L +KG T+LALYG K F K+ + + F+
Sbjct: 153 FGKVVNNEDITVAPLLFKKGTTKLALYGIGNVKDERLHRVFRDNKATFLRSSDEPDSWFN 212
Query: 685 LFVLHPNHADRGHSNYIPEGVLPTF 759
+H NH ++YIPE LP F
Sbjct: 213 FLCVHQNHVAHTRTSYIPENFLPKF 237
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 93.5 bits (222), Expect = 6e-18
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSD--QIKNFSR--TVNYEDPNLNISYPILSI 424
KPS +++ + +R C+GDKP +ELLSD Q+ ++ VNYEDPN NIS P+ I
Sbjct: 62 KPSKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGI 121
Query: 425 HGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLK 604
GNHDD G + +DIL TGL+N+F + + +K GL+ ++
Sbjct: 122 SGNHDDASGDSLLCPMDILHATGLINHFGKVIESDKIKVVPLLFQKGSTKLALYGLAAVR 181
Query: 605 DQRLSRLFAEKKVEMERP 658
D+RL R F + V E P
Sbjct: 182 DERLFRTFKDGGVTFEVP 199
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +3
Query: 87 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
PD DT+RILI +D H+G+ ENDP+ G+DS+ F EV+ LA +VD+++ GDLF
Sbjct: 4 PDPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLF 58
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +1
Query: 505 FCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFH 684
F K + +++ P+L QKG T+LALYG + F +F G F+
Sbjct: 149 FGKVIESDKIKVVPLLFQKGSTKLALYGLAAVRDERLFRTFKDGGVTFEVPTMREGEWFN 208
Query: 685 LFVLHPNHADRGHSNYIPEGVLPTF 759
L +H NH ++ ++PE LP F
Sbjct: 209 LMCVHQNHTGHTNTAFLPEQFLPDF 233
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 91.1 bits (216), Expect = 3e-17
Identities = 48/136 (35%), Positives = 76/136 (55%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNH 436
+PS +C+ + + R+YC+G++ + N + +N+ D N+ IS P++SIHGNH
Sbjct: 54 RPSRSCLNRTIGLFRRYCIGNERSGLR------SNLA--LNFHDQNIGISIPVVSIHGNH 105
Query: 437 DDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQRL 616
DDP G VS +DIL GLVNY + + +K R + GL H+KD+RL
Sbjct: 106 DDPSGISMVSPIDILQSAGLVNYIGKYNLIDRIDVYPLLLEKEYRVA-IYGLGHIKDRRL 164
Query: 617 SRLFAEKKVEMERPDE 664
R+F E ++ RP++
Sbjct: 165 YRMFCEGRIVFHRPED 180
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLLSIVC 278
++ILI SD HLG+ E+DPV +DS+ FEE+L +A + VDL+L GGDLF + N S C
Sbjct: 1 MKILITSDNHLGYRESDPVLLDDSYDTFEEILGIAQRERVDLVLQGGDLFHE-NRPSRSC 59
Query: 279 LN 284
LN
Sbjct: 60 LN 61
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 90.6 bits (215), Expect = 4e-17
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTV----NYEDPNLNISYPILSIH 427
PS + T+++R+YCL P+++E LSD NF+++V NY D NLN+ PI +IH
Sbjct: 120 PSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIH 179
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKD 607
GNHDD G+G +++LD+L +GLVN F + +K G+ +D
Sbjct: 180 GNHDDLSGKG-LTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRD 238
Query: 608 QRLSRLFAEKKVEMERPD 661
RL R F + RP+
Sbjct: 239 DRLVRAFKNNSISFLRPN 256
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGDLF + N
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENN 119
Score = 49.6 bits (113), Expect = 9e-05
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Frame = +1
Query: 502 LFCKWTDYTHVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTG- 678
LF K ++ +SP+LL+KG TRLALYG + +F K + R N G
Sbjct: 204 LFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAF--KNNSISFLRPNAGAED 261
Query: 679 -FHLFVLHPNHADRG-H---SNYIPEGVLPTF 759
F+LFVLH N R H N++PE ++P F
Sbjct: 262 WFNLFVLHQNRPRRAMHRSTGNFLPESLIPQF 293
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 87.4 bits (207), Expect = 4e-16
Identities = 45/133 (33%), Positives = 67/133 (50%)
Frame = +2
Query: 275 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 454
M+K IIR+YC+G+K + L+ Q + N+E + N+S P IHGNHDDP +
Sbjct: 1 MYKVMNIIREYCMGNKQIKFRALNRQDSSNVNGYNWEVGDANVSIPFFGIHGNHDDPGEE 60
Query: 455 GSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQRLSRLFAE 634
G +S LDIL +NY E +K G+ +++D+RL R F +
Sbjct: 61 GLLSPLDILESARFINYIGKNNNVDNIEVFPVLLEKGSTRLAIYGIGNIRDERLHRSFEK 120
Query: 635 KKVEMERPDETLG 673
KV+ P+ T G
Sbjct: 121 NKVKFLIPENTNG 133
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/95 (41%), Positives = 62/95 (65%)
Frame = +2
Query: 374 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYF 553
VNYED ++N++ P+ SIHGNHDDP G+G +++LDIL ++GL+NY+ P + +
Sbjct: 93 VNYEDLDINVAIPVFSIHGNHDDPSGEGHLAALDILQVSGLLNYYGRTPESDNIQVKPVL 152
Query: 554 CKKVLRGSPSMGLSHLKDQRLSRLFAEKKVEMERP 658
+K GLS+++D+RL R F + KV+ +P
Sbjct: 153 LQKGRTKLALYGLSNVRDERLFRTFRDGKVKFFQP 187
Score = 73.3 bits (172), Expect = 7e-12
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLLSI 272
DT+RIL+++D H+G+ E DP+RG+DS+ F E++ LA + DVD++LL GDLF + N +
Sbjct: 14 DTIRILVSTDNHVGYNERDPIRGDDSWKTFHEIMCLAKERDVDMVLLAGDLFHENNHPAN 73
Query: 273 VCLNVQK*SANIVLG 317
C+ A IV G
Sbjct: 74 PCIKSCAPYAQIVWG 88
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +1
Query: 529 HVRISPVLLQKGLTRLALYGT*PFKRSETFTSFC*KKSGNGETR*NIGTGFHLFVLHPNH 708
++++ PVLLQKG T+LALYG + F +F K + F+L +H NH
Sbjct: 145 NIQVKPVLLQKGRTKLALYGLSNVRDERLFRTFRDGKVKFFQPSVQKEDWFNLICVHQNH 204
Query: 709 ADRGHSNYIPEGVLPTF 759
+ Y+PE LP F
Sbjct: 205 HAYTETGYLPENFLPEF 221
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 83.8 bits (198), Expect = 5e-15
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYPILSIH 427
KPS + + K EI+R+YC+ D PV +++SDQ ++N VNYEDPN I P+ +IH
Sbjct: 138 KPSNSTLVKAIEILRRYCMNDCPVQFQVISDQAASLQNRFCQVNYEDPNYKIGLPVFTIH 197
Query: 428 GNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPS----MGLS 595
G+ D P G ++S DIL+ +NYF T V+R + GL
Sbjct: 198 GDQDYPTGTDNLSVNDILTAGNFLNYFGKTDLGCTGVGKVTVYPVVIRKGETYIAMYGLG 257
Query: 596 HLKDQRLSRLFAE 634
++KD RL R+ E
Sbjct: 258 NIKDGRLKRMLHE 270
Score = 66.5 bits (155), Expect = 8e-10
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
++LR+L+A+D HLG++E D VRG DSF FEE+ SLAV+ VD +LL G+LF +
Sbjct: 83 NSLRVLVATDCHLGYLEKDEVRGFDSFDTFEEICSLAVKNKVDFLLLCGNLFHE 136
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 76.2 bits (179), Expect = 9e-13
Identities = 37/76 (48%), Positives = 49/76 (64%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLLS 269
++T +IL+A+D H+G+ ENDP+RG DSF AFEEVL +A VD +LLGGDLF + N
Sbjct: 21 ENTFKILVATDNHVGYKENDPIRGNDSFEAFEEVLKIAKSEKVDFLLLGGDLFHETNPSQ 80
Query: 270 IVCLNVQK*SANIVLG 317
+ N VLG
Sbjct: 81 QCLYKMLNLLGNYVLG 96
Score = 74.5 bits (175), Expect = 3e-12
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Frame = +2
Query: 254 TKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGN 433
T PS C++K ++ Y LGD E+L I N++ VN++D NLNI PI IHGN
Sbjct: 76 TNPSQQCLYKMLNLLGNYVLGDG----EILYG-ISNYN-DVNFQDCNLNIELPIFVIHGN 129
Query: 434 HDDPVGQ-GSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQ 610
HD P + G++S +D+L T +N+F + +K G+ +LKD+
Sbjct: 130 HDYPSDEYGNLSVIDLLHATKYLNHFGKFSNIEQIKVTPIIFQKGNTTVALYGIGYLKDK 189
Query: 611 RLSRLFAEKKVEMERPDE 664
++ E K+E +P++
Sbjct: 190 YFHKMLEEGKIEFVKPEQ 207
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 69.3 bits (162), Expect = 1e-10
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHD 439
PS C+ K E++RKY +G S ++ N + N N I YP+ IHGNHD
Sbjct: 62 PSKYCLTKTMELMRKYLMGKPKNSFDVAYTYEHN--QEDNGFSMNQGIKYPMYVIHGNHD 119
Query: 440 DPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSM----------- 586
P G V+ LDIL GLVN+ G E + +L SP +
Sbjct: 120 IPSGIEHVAGLDILQTAGLVNFI--GKAEDISEIDNKTDQTILHLSPILLQKGTTRIALY 177
Query: 587 GLSHLKDQRLSRLFAEKKVEMERPDETLGLGSIY--LYYIQIMLTEDTVTIFQKE 745
G+S+ K++ ++RL+A +V+++ PD G ++ L Q + +T+T F +E
Sbjct: 178 GMSYKKNEEMNRLWASSQVQIDEPD-----GDVFKILLIHQDRILRNTLTTFPEE 227
Score = 57.2 bits (132), Expect = 5e-07
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+T +ILI SD HLG E +D ++AFEE+L A Q DVDLIL GD FD N
Sbjct: 6 NTFKILICSDTHLGAGEKSHCLKDDCYLAFEEILQQANQEDVDLILHSGDFFDDQN 61
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 68.5 bits (160), Expect = 2e-10
Identities = 28/83 (33%), Positives = 50/83 (60%)
Frame = +2
Query: 257 KPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNH 436
+P+ +C+ K +I+KYC+GD + + + S +N DP +N+ +P+ +IHG +
Sbjct: 56 RPNKSCVSKTANLIKKYCIGDADIPYTIKDEA--ELSYPLNITDPYINVKHPLFTIHGTN 113
Query: 437 DDPVGQGSVSSLDILSITGLVNY 505
D+P G ++ +IL+ GLVNY
Sbjct: 114 DEPSGYKLIAGSEILASCGLVNY 136
Score = 36.7 bits (81), Expect = 0.70
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +3
Query: 96 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQL 257
++ + D HLG+ E + +D + FE+ L A Q + ++L GDLF+ L
Sbjct: 2 SITFFVTGDNHLGYYEKNLTLKDDCYKLFEQYLKEATQKEGSILLQCGDLFNDL 55
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +3
Query: 39 SCTSKIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 218
S SK D+ D+ ++IL+ +D HLG+ E+DP RG DS FEE+L +A +V
Sbjct: 244 SDVSKEFEFKDLDESEDDNVVKILVFTDTHLGYKEDDPFRGNDSLNTFEELLFIAKHLEV 303
Query: 219 DLILLGGDLFDQ 254
D IL GDLFD+
Sbjct: 304 DFILHSGDLFDK 315
Score = 54.0 bits (124), Expect = 4e-06
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +2
Query: 410 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCK--KVLRGSPS 583
P IHGNHD+P Q S+S +DIL + GLV YF R + K K+ +G
Sbjct: 394 PFFVIHGNHDNPTYQHSLSPIDILDVAGLVTYF-----GRVFDLENVVIKPIKISKGDVK 448
Query: 584 M---GLSHLKDQRLSRLFAEKKVEMERPDE 664
+ GL +KD+RL +F + V+ E+ +E
Sbjct: 449 IALYGLGWIKDERLVEMFNKNMVKFEQCEE 478
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/52 (51%), Positives = 41/52 (78%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
DTL+IL+ +D HLG+ EN+P++ +D+F FEE+L +A + +VD+IL GDLF
Sbjct: 303 DTLKILLCTDNHLGYKENNPIQKKDTFNTFEEILFIAKKLNVDMILNSGDLF 354
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +2
Query: 404 SYPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPS 583
S P +IHGNHD P + LDIL+I+ L+NY + KK S
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLINYIGKNNMEKLIIKPILLNKKGTHIS-I 594
Query: 584 MGLSHLKDQRLSRLFAEKKVEMERPDE 664
+ +KD+RL F K ++ P++
Sbjct: 595 YAIGWIKDERLYNYFENKNIKFIIPED 621
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = +3
Query: 60 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGG 239
I +S PD TL+IL+ +D HLG+ EN+ V+ ED+F +FEE+L +A +VDLIL G
Sbjct: 295 IRKSLSKNEPD-TLKILLCTDNHLGYKENNAVQKEDTFNSFEEILFVAKHLNVDLILNSG 353
Query: 240 DLF 248
DLF
Sbjct: 354 DLF 356
Score = 50.0 bits (114), Expect = 7e-05
Identities = 28/85 (32%), Positives = 39/85 (45%)
Frame = +2
Query: 410 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMG 589
P+ ++HGNHD P +S LDIL + L+NY R K
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLINYIGKSSLDRI-VIKPVLLNKEETKIAIYA 607
Query: 590 LSHLKDQRLSRLFAEKKVEMERPDE 664
+ +KD+RL R F EKKV+ P +
Sbjct: 608 IGWIKDERLHRAFEEKKVKFMLPSD 632
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 62.9 bits (146), Expect = 9e-09
Identities = 37/135 (27%), Positives = 66/135 (48%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHD 439
PS + K +I+ ++ +G L S+ + S N+ +PN+NI P +HGNHD
Sbjct: 63 PSRYAVIKTMKILDEFVIGQGNPPEILYSEGL---SSDPNWLNPNINIKIPFFCMHGNHD 119
Query: 440 DPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQRLS 619
P G GS S + +LS++ +N+F T E K+ GL ++ +++
Sbjct: 120 APNGLGSTSPIQLLSVSKYLNFFKPVDIKETIELQPIVLKRGTIRVVVYGLGYIFEEKFK 179
Query: 620 RLFAEKKVEMERPDE 664
+ KK+++ P+E
Sbjct: 180 EVVMGKKLKLIAPEE 194
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = +3
Query: 84 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNL 263
S DT +I I +D H+G+ E D + +DSF AF+E + A + D+IL GD F++ N
Sbjct: 4 SQQDTFKIAIFTDTHIGYDEQDAITEKDSFRAFKECVQNAHIQNADIILHAGDFFNERNP 63
Query: 264 LSIVCLNVQK*SANIVLG 317
+ K V+G
Sbjct: 64 SRYAVIKTMKILDEFVIG 81
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 62.1 bits (144), Expect = 2e-08
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHD 439
P+ +C+ KC +I++++ GD I++ ++ + + N+ N N+ PI I+GNHD
Sbjct: 438 PTEHCLLKCVDILQRHVFGDNFGGIQM---EVNSLNYQPNFSCSNFNVQLPIFIINGNHD 494
Query: 440 DPVGQ--GSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMGLSHLKDQR 613
D V + SVS LDIL + +NY K + GL ++KD +
Sbjct: 495 DIVTERNESVSILDILHESKYLNYIGKITDQSNVCIKPIVLVKNNQKIALYGLGYMKDYQ 554
Query: 614 LSRLFAEKKVEMERPDE 664
L ++ E K+ ++ DE
Sbjct: 555 LHKIINEGKLVLDSLDE 571
Score = 53.2 bits (122), Expect = 8e-06
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Frame = +3
Query: 102 RILIASDIHLGFMEN---DPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+ L+ASD HLG EN R +D+F AFEEVL +A Q +VD ++LGGDLF +
Sbjct: 382 KFLVASDNHLGANENVGPKSNRYQDAFDAFEEVLQIASQQNVDFVILGGDLFHE 435
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/51 (50%), Positives = 40/51 (78%)
Frame = +3
Query: 96 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
TL+IL+ +D HLG+ EN+ ++ +DSF +FEE+L +A + +VD+IL GDLF
Sbjct: 350 TLKILLCTDNHLGYKENNSIQKKDSFNSFEEILFIAKKLNVDMILNSGDLF 400
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +2
Query: 410 PILSIHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSMG 589
P +IHGNHD P +S LDIL+I+ L+NY + K
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLINY-IGKNNLNNIVVKPILLNKYKSKISIYA 641
Query: 590 LSHLKDQRLSRLFAEKKVEMERPDE 664
+ +KD+RL R F +V+ P +
Sbjct: 642 VGWMKDERLYRSFENNEVKFILPSD 666
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 59.7 bits (138), Expect = 9e-08
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
LR +I +D HLG E DP+R DSF AF+EVL LA VD IL GDLFD
Sbjct: 207 LRFMIFTDTHLGHKETDPIRENDSFNAFQEVLFLAKYLQVDGILHAGDLFD 257
Score = 51.6 bits (118), Expect = 2e-05
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Frame = +2
Query: 260 PSVNCMFKCTEIIRKYC-----LGDKPVSIEL-LSDQIKNFSR---TVNYEDPNLN--IS 406
PS + +++ E++R+YC P++I L S +++ ++ + + D +
Sbjct: 261 PSRSVIYRTMELLRRYCRKSDLTSPLPLNIRLPKSCAVRSETKRLEALKFIDGTITKEAR 320
Query: 407 YPILSIHGNHDDPVGQGSVSSLDILSITGLVNYFVNGPTTRT*EYHQYFCKKVLRGSPSM 586
P IHGNHD+P +S +D+L ++GLV +F E H K
Sbjct: 321 VPFFVIHGNHDNPTTMNGLSPIDLLDVSGLVTFFGTVTDMTKVEVHPICISKGDIHLALY 380
Query: 587 GLSHLKDQRLSRLFAEKKVEMERPDET 667
G+ +K++ L + F E KV P T
Sbjct: 381 GMGWVKEEFLYKAFEENKVVFVPPVNT 407
>UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein
mre11; n=2; Methanosarcina|Rep: DNA double-strand break
repair protein mre11 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 617
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +3
Query: 90 DDTLRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
D +RIL +D HLG+ + + VR +D F AFE V+ AV VD ++ GDLFD N
Sbjct: 2 DREIRILHTADTHLGYRQYHSEVRRQDFFKAFETVIKDAVDMQVDAVVHAGDLFDSRN 59
>UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina
barkeri str. Fusaro|Rep: DNA repair protein -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 776
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 99 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+RIL +D HLG+ + + VR D F AFE V++ AV+ VD ++ GDLFD N
Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQVDAVVHAGDLFDSRN 59
>UniRef50_Q2JK75 Cluster: Ser/Thr protein phosphatase family
protein; n=4; Synechococcus|Rep: Ser/Thr protein
phosphatase family protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 430
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +3
Query: 96 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLS-LAVQCDVDLILLGGDLFD 251
T L +D+HLG+ D P R +D F+AF +V+ A+Q VD +L+ GDLF+
Sbjct: 5 TCTFLHLADVHLGYDRYDSPERSKDFFLAFRDVVRRYAIQDPVDFVLIAGDLFE 58
>UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=2; Rhodobacteraceae|Rep: Putative ATP-dependent dsDNA
exonuclease - Roseobacter sp. SK209-2-6
Length = 380
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+RIL +D+HLG N ED E++LS V DVD++++ GD+FD+
Sbjct: 1 MRILHTADLHLGRQFNGISLEEDHAAILEQILSAVVAHDVDVLIIAGDIFDR 52
>UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphagus
sp. PR1|Rep: DNA repair exonuclease - Algoriphagus sp.
PR1
Length = 414
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
++IL +D HLG + R E+ + EE++ +A Q +VDL+LL GD+FD N
Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFN 55
>UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus
elongatus|Rep: Tll0060 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 428
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +3
Query: 99 LRILIASDIHLGF---MENDPVRGEDSFIAFEEVL-SLAVQCDVDLILLGGDLFDQ 254
+R L +D+HLG+ +++P R D F AF+ L + A+Q VD +L+ GDLF++
Sbjct: 2 VRFLHVADVHLGYNKYRQDNPSRMLDFFRAFDSALETYAIQAQVDFVLIAGDLFEE 57
>UniRef50_A5YS39 Cluster: DNA double-strand break repair protein
mre11; n=1; uncultured haloarchaeon|Rep: DNA
double-strand break repair protein mre11 - uncultured
haloarchaeon
Length = 397
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 96 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
T IL SD HLG + + VR +D AF++ +S+A+Q DVD ++ GDLFD
Sbjct: 11 TTTILHISDTHLGNRQYEYDVRRDDFSDAFDQSVSIAIQEDVDAVIHTGDLFD 63
>UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein
mre11; n=4; Thermococcaceae|Rep: DNA double-strand break
repair protein mre11 - Pyrococcus furiosus
Length = 426
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +3
Query: 117 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
+DIHLG+ + + P R E+ AF+ L +AVQ +VD IL+ GDLF
Sbjct: 7 ADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLF 51
>UniRef50_Q12VW7 Cluster: Metallophosphoesterase; n=1;
Methanococcoides burtonii DSM 6242|Rep:
Metallophosphoesterase - Methanococcoides burtonii
(strain DSM 6242)
Length = 485
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 99 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+RIL D H+G+ + + VR +D AF V+ A+ VD+++ GDLFD N
Sbjct: 5 IRILHTGDTHIGYRQYHSEVRRQDFIDAFSSVIDDAIDMKVDVVVHAGDLFDSRN 59
>UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Conserved DNA
repair operon protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 451
Score = 42.7 bits (96), Expect = 0.011
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 102 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
R+L D H+G+ + + P R ED AF +V AV+ DVD ++ GDLF
Sbjct: 3 RVLHTGDTHIGYRQYHTPERREDFLSAFRQVADDAVEMDVDAVVHAGDLF 52
>UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Predicted DNA
repair exonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 407
Score = 42.3 bits (95), Expect = 0.014
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGE-DSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
L +L SD HLG+ + + E D + FEEV+ +A++ VD ++ GDLFD
Sbjct: 11 LHLLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGDLFD 62
>UniRef50_O29231 Cluster: DNA double-strand break repair protein
mre11; n=1; Archaeoglobus fulgidus|Rep: DNA
double-strand break repair protein mre11 - Archaeoglobus
fulgidus
Length = 443
Score = 41.1 bits (92), Expect = 0.033
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 117 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
+D+HLG+ + N P R ED AF+ + AV+ + D +++ GDLF
Sbjct: 7 ADVHLGYEQYNQPWRAEDFAKAFKVIAEKAVESNADFVVIAGDLF 51
>UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeum
symbiosum|Rep: DNA repair exonuclease - Cenarchaeum
symbiosum
Length = 417
Score = 39.9 bits (89), Expect = 0.075
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
+R ASDIHLGF + ++G + + FE+V+ + VD +L+ GD+F
Sbjct: 1 MRFAHASDIHLGFQDGAALQGIEREV-FEKVIDGCISRKVDFVLMPGDIF 49
>UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3;
Thermotoga|Rep: Exonuclease, putative - Thermotoga
maritima
Length = 385
Score = 38.7 bits (86), Expect = 0.17
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +3
Query: 99 LRILIASDIHLG---FMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLL 266
L+IL SD HLG + + PV R E+ A ++V+ A + +VDLILL GDL N
Sbjct: 7 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNP 66
Query: 267 SIVCLN 284
S+V L+
Sbjct: 67 SVVALH 72
>UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1;
Aquifex aeolicus|Rep: ATP-dependent dsDNA exonuclease -
Aquifex aeolicus
Length = 379
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+R++ SDIH G R ED A +V+ + DL+L+ GD+FD+ N
Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKAN 54
>UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein
mre11; n=1; Pyrococcus abyssi|Rep: DNA double-strand
break repair protein mre11 - Pyrococcus abyssi
Length = 423
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 117 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
+D+HLG+ + N R E+ AFE+ + + V VD I++ GDLF+
Sbjct: 17 ADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGDLFN 62
>UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter
carbinolicus DSM 2380|Rep: DNA repair exonuclease -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 370
Score = 38.3 bits (85), Expect = 0.23
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 99 LRILIASDIHLGFM-----ENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
+RIL +DIHLG + E R D AFE ++ LA+ V L+++ GDLF
Sbjct: 2 IRILHTADIHLGAVFAELAECAAARRNDQLYAFERMVELAIDRKVHLLVVAGDLF 56
>UniRef50_UPI00015BCD31 Cluster: UPI00015BCD31 related cluster; n=1;
unknown|Rep: UPI00015BCD31 UniRef100 entry - unknown
Length = 380
Score = 37.9 bits (84), Expect = 0.30
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
++ L DIH G + R +D+ A +V+ + VD IL+ GD+FDQ
Sbjct: 2 IKFLHIGDIHAGKTLHSRSRNDDAEYAISQVIDFVKKEPVDFILMAGDIFDQ 53
>UniRef50_A7DNM9 Cluster: Metallophosphoesterase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep:
Metallophosphoesterase - Candidatus Nitrosopumilus
maritimus SCM1
Length = 415
Score = 37.9 bits (84), Expect = 0.30
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 117 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
SDIHLGF + ++ + + FEEV+ ++ VD +L+ GDLF
Sbjct: 8 SDIHLGFQDKKELQKIEQEV-FEEVVCTCIKQKVDFVLITGDLF 50
>UniRef50_Q2AI56 Cluster: Exonuclease SbcD; n=1; Halothermothrix
orenii H 168|Rep: Exonuclease SbcD - Halothermothrix
orenii H 168
Length = 435
Score = 37.5 bits (83), Expect = 0.40
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
LRIL +D HLG R E+ EE++ +A VD++L+ GD+FD N
Sbjct: 27 LRILHTADWHLGKHLEGWSRYEEQKEFVEEIIEIADDNKVDMVLICGDIFDTTN 80
>UniRef50_UPI00015BAD8F Cluster: metallophosphoesterase; n=1;
Ignicoccus hospitalis KIN4/I|Rep: metallophosphoesterase
- Ignicoccus hospitalis KIN4/I
Length = 384
Score = 37.1 bits (82), Expect = 0.53
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 ILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
I+ A+D+HLG + R ED + AFE+++ ++ D +++ GDLFD
Sbjct: 3 IVHAADVHLGKRQYGLKEREEDFYKAFEDLVEATIREKADALVIAGDLFD 52
>UniRef50_O26641 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanothermobacter thermautotrophicus str.
Delta H|Rep: DNA double-strand break repair protein
mre11 - Methanobacterium thermoautotrophicum
Length = 587
Score = 37.1 bits (82), Expect = 0.53
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 117 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
SD HLG ++ +R E F AF L A+Q DVD +++ GDLF
Sbjct: 177 SDCHLGAQKHPDLR-ELEFEAFRMALDDALQKDVDFMIIAGDLF 219
>UniRef50_Q74D96 Cluster: Nuclease SbcCD, D subunit, putative; n=2;
Geobacter|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 376
Score = 36.7 bits (81), Expect = 0.70
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +3
Query: 99 LRILIASDIHLG-----FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNL 263
+R L +D+HL F + R D F+ +++LA++ +VD IL+ GDLFD ++
Sbjct: 3 IRFLHTADLHLDSPLRTFGDLARERRRDFLKTFDRIVNLAIKREVDCILIAGDLFDSTSV 62
>UniRef50_Q9YFY8 Cluster: DNA double-strand break repair protein
mre11; n=1; Aeropyrum pernix|Rep: DNA double-strand
break repair protein mre11 - Aeropyrum pernix
Length = 409
Score = 36.7 bits (81), Expect = 0.70
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 102 RILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNL 263
++L +D+HLG R +D F +FE V+ A++ D +L+ GDLFD+ L
Sbjct: 3 KVLHVADVHLGARPYGLEERRDDIFRSFEFVVETALKDRPDAVLIAGDLFDKPKL 57
>UniRef50_Q9AN75 Cluster: ID473; n=1; Bradyrhizobium japonicum|Rep:
ID473 - Bradyrhizobium japonicum
Length = 173
Score = 36.3 bits (80), Expect = 0.93
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+RIL +D H+G R + FE + + V+ DVD +++ GD+FD N
Sbjct: 2 IRILHTADWHIGQTLRGFSREHEHRKVFERLEEIVVERDVDALIIAGDVFDSQN 55
>UniRef50_Q0HTQ0 Cluster: Nuclease SbcCD, D subunit precursor; n=40;
Gammaproteobacteria|Rep: Nuclease SbcCD, D subunit
precursor - Shewanella sp. (strain MR-7)
Length = 400
Score = 36.3 bits (80), Expect = 0.93
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+R + SD H+G ++ ED +++++LA Q VD +++ GD++D+
Sbjct: 1 MRFIHTSDWHIGRQLHNQSLLEDQAYVLDQIVTLAEQHTVDAVIIAGDIYDR 52
>UniRef50_Q03B99 Cluster: DNA repair exonuclease; n=4;
Lactobacillus|Rep: DNA repair exonuclease -
Lactobacillus casei (strain ATCC 334)
Length = 373
Score = 36.3 bits (80), Expect = 0.93
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+R L +D H+G ND ED FE+++ A VD I++ GDL+D+
Sbjct: 1 MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAETHKVDAIVIAGDLYDR 52
>UniRef50_Q7QVF9 Cluster: GLP_90_7352_9805; n=3; Giardia
intestinalis|Rep: GLP_90_7352_9805 - Giardia lamblia
ATCC 50803
Length = 817
Score = 36.3 bits (80), Expect = 0.93
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 102 RILIASDIHLGFMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLLS 269
RI + +D HLGF P ++++ EE L LA + IL GD F+Q L S
Sbjct: 9 RIALFTDTHLGFTAPSARPCNAHENYLLLEECLCLARKLGAHAILHAGDFFNQNRLSS 66
>UniRef50_Q2NFC6 Cluster: DNA double-strand break repair protein
Mre11; n=1; Methanosphaera stadtmanae DSM 3091|Rep: DNA
double-strand break repair protein Mre11 -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 393
Score = 36.3 bits (80), Expect = 0.93
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 96 TLRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFD 251
T++I +D HLG+ + E+ F FE+++ + DVD +L GDLF+
Sbjct: 2 TIKIAHMADTHLGYKQYGLNERENDFYKTFEKIIDDIISKDVDYVLHAGDLFE 54
>UniRef50_Q1FMZ5 Cluster: Nuclease SbcCD, D subunit; n=1;
Clostridium phytofermentans ISDg|Rep: Nuclease SbcCD, D
subunit - Clostridium phytofermentans ISDg
Length = 375
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/63 (30%), Positives = 37/63 (58%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLNLLSIVC 278
++ + SD+H+G N+ ED +++L LA + D +L+ GD++D+ NL +I
Sbjct: 1 MKFMHLSDLHIGKRVNEFSMIEDQTYILQKILELADEEKPDAVLIAGDVYDK-NLPTIEG 59
Query: 279 LNV 287
+N+
Sbjct: 60 VNL 62
>UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein
mre11; n=5; Halobacteriaceae|Rep: DNA double-strand
break repair protein mre11 - Halobacterium salinarium
(Halobacterium halobium)
Length = 387
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 102 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
R++ D HLG+ + + P R +D AF+ V++ A+ VD ++ GDL+
Sbjct: 3 RVIHTGDTHLGYQQYHAPQRRQDFLDAFDAVITDAIDEGVDAVVHAGDLY 52
>UniRef50_A6TVN1 Cluster: Nuclease SbcCD, D subunit; n=3;
Clostridiaceae|Rep: Nuclease SbcCD, D subunit -
Alkaliphilus metalliredigens QYMF
Length = 406
Score = 35.5 bits (78), Expect = 1.6
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +3
Query: 99 LRILIASDIHLG--FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
++IL SD HLG N + ++ F+ EE++++ + ++DLIL+ GD++D N
Sbjct: 1 MKILHTSDWHLGKTLEGNSRLAEQERFL--EELVTIVNEKEIDLILVAGDIYDTSN 54
>UniRef50_Q8TXI3 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanopyrus kandleri|Rep: DNA double-strand
break repair protein mre11 - Methanopyrus kandleri
Length = 451
Score = 35.5 bits (78), Expect = 1.6
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 99 LRILIASDIHLGF-MENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
+R+ +D+HLG + N R E FE ++ +C VD++++ GDLF+
Sbjct: 1 MRMAHVADVHLGHALMNLRSREEAVMETFERLMEEVRECSVDVLVIAGDLFE 52
>UniRef50_Q5LYZ3 Cluster: ATP-dependent dsDNA exonuclease; n=6;
Streptococcaceae|Rep: ATP-dependent dsDNA exonuclease -
Streptococcus thermophilus (strain CNRZ 1066)
Length = 408
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
++ L SD H+G N E+ AF++++ LA+ VD +++ GDL+D+
Sbjct: 7 MKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIISGDLYDR 58
>UniRef50_Q2AE44 Cluster: Metallophosphoesterase; n=1;
Halothermothrix orenii H 168|Rep: Metallophosphoesterase
- Halothermothrix orenii H 168
Length = 464
Score = 35.1 bits (77), Expect = 2.1
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Frame = +3
Query: 93 DTLRILIASDIHLGFMENDPVR-----GE----DSFIAFEEVLSLAVQCDVDLILLGGDL 245
D L+ + ASDIHLG + + GE ++ AF + + A++ +VD ++L GD+
Sbjct: 8 DELKFIHASDIHLGSVLHTGTTHKGDIGEIVKKATYKAFSRICNHAIEFEVDFVVLSGDI 67
Query: 246 FDQ 254
FD+
Sbjct: 68 FDR 70
>UniRef50_A5IU09 Cluster: Metallophosphoesterase; n=16;
Staphylococcus|Rep: Metallophosphoesterase -
Staphylococcus aureus subsp. aureus JH9
Length = 398
Score = 35.1 bits (77), Expect = 2.1
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 162 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+ ++ +F+ ++ +A+Q DVD +++ GDLFD N
Sbjct: 32 KSAYESFKNIVDIALQQDVDFVIIAGDLFDSEN 64
>UniRef50_A1S0I8 Cluster: Metallophosphoesterase; n=1; Thermofilum
pendens Hrk 5|Rep: Metallophosphoesterase - Thermofilum
pendens (strain Hrk 5)
Length = 391
Score = 35.1 bits (77), Expect = 2.1
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +3
Query: 93 DTLRILIASDIHLG--FMENDPV---RGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQL 257
+ LRI+ +D HL F P R ED AF V+ AV+ L L+ GDLFD +
Sbjct: 2 EVLRIVHTADNHLDPKFTFLGPKVRDRREDFLNAFRRVVDFAVEAKPHLFLVSGDLFDSV 61
Query: 258 N 260
N
Sbjct: 62 N 62
>UniRef50_P62132 Cluster: DNA double-strand break repair protein
mre11; n=1; Nanoarchaeum equitans|Rep: DNA double-strand
break repair protein mre11 - Nanoarchaeum equitans
Length = 361
Score = 35.1 bits (77), Expect = 2.1
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 ILIASDIHLG-FMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
I SD+HLG N E S+ A ++ ++ DL+L+GGD+FD+
Sbjct: 2 IAFISDLHLGNIYANKKETEEHSYNALAKIEEKLLEYQPDLVLVGGDIFDK 52
>UniRef50_A4YET4 Cluster: Metallophosphoesterase; n=1;
Metallosphaera sedula DSM 5348|Rep:
Metallophosphoesterase - Metallosphaera sedula DSM 5348
Length = 379
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 ILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
IL SD HLG N R +D + F +++ LA++ V I+ GDLFD
Sbjct: 2 ILHISDTHLGSRRYNRDSREQDVYDVFSQLIDLAIREHVRAIVHSGDLFD 51
>UniRef50_Q67MD2 Cluster: DNA repair exonuclease; n=1;
Symbiobacterium thermophilum|Rep: DNA repair exonuclease
- Symbiobacterium thermophilum
Length = 411
Score = 34.3 bits (75), Expect = 3.7
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+RIL +D HLG R E+ +E+ ++ + +DL+L+ GD+FD N
Sbjct: 1 MRILHTADWHLGRTLEGRSRQEEHEAFVDELCAMVREERIDLVLIAGDVFDTGN 54
>UniRef50_Q5SIS5 Cluster: Exonuclease SbcD; n=2; Thermus
thermophilus|Rep: Exonuclease SbcD - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 372
Score = 34.3 bits (75), Expect = 3.7
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+R+L +D HLG + R + A ++L L VDL+++ GDLFD+
Sbjct: 1 MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLFDR 52
>UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 430
Score = 34.3 bits (75), Expect = 3.7
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 281 KCTEIIR-KYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 457
KC ++ + L + + +E L + K+ + N E NL+ISY S+H H +G
Sbjct: 76 KCQNLVDLELILRNTEIKLENLKNIYKDLEKLTNIEKLNLDISYNTFSLHAEHKYMMGID 135
Query: 458 SVSSLDILSIT 490
++L S++
Sbjct: 136 KCTNLVSFSLS 146
>UniRef50_Q6L2H7 Cluster: DNA repair protein; n=2;
Thermoplasmatales|Rep: DNA repair protein - Picrophilus
torridus
Length = 370
Score = 34.3 bits (75), Expect = 3.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFI-AFEEVLSLAVQCDVDLILLGGDLFD 251
+R + SD HLG+ + E+ F AF E + + + VD + GDLFD
Sbjct: 2 VRFIHFSDTHLGYKQYMMDERENDFYEAFNEAIDIGINEHVDFFVHSGDLFD 53
>UniRef50_Q38Y02 Cluster: Putative metallo-phosphoesterase; n=1;
Lactobacillus sakei subsp. sakei 23K|Rep: Putative
metallo-phosphoesterase - Lactobacillus sakei subsp.
sakei (strain 23K)
Length = 397
Score = 33.9 bits (74), Expect = 4.9
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 162 EDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
E +F AFE+++ A+ VD +LL GD FDQ
Sbjct: 31 ESTFTAFEKLVQTAIDEAVDFVLLVGDSFDQ 61
>UniRef50_Q2S5E8 Cluster: Outer membrane protein, putative; n=1;
Salinibacter ruber DSM 13855|Rep: Outer membrane
protein, putative - Salinibacter ruber (strain DSM
13855)
Length = 943
Score = 33.9 bits (74), Expect = 4.9
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -2
Query: 330 LTGLSPRQYLRIISVHLNIQLTEGLVDQTDHLLKVSNQHHIVPQETKLLQKL*SYLLRV 154
L GL+P +L + V N+ LT+ +D+T+ +L + Q P ET+ LQ Y+ V
Sbjct: 789 LGGLAP--WLEHVQVGGNLTLTQSQIDRTEEVLTLIRQFRDDPDETRQLQGQSPYIANV 845
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 33.9 bits (74), Expect = 4.9
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 389 PNLNISYPILSIHGNHDDPVGQGSVSSLDILS-ITGLVNYF 508
P + P++ I GNHD PV G SSLDI I G V+ +
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDIFDHIAGAVHCY 139
>UniRef50_A7HL21 Cluster: Metallophosphoesterase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep:
Metallophosphoesterase - Fervidobacterium nodosum
Rt17-B1
Length = 397
Score = 33.9 bits (74), Expect = 4.9
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = +3
Query: 99 LRILIASDIHLG------FMEND--PVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
++IL SD HLG EN R D F A E ++ A++ +VDL ++ GDLFD
Sbjct: 1 MKILHTSDWHLGKRPVGGIGENSYSDFRYNDYFNAAEYIVDRAIEENVDLFIIAGDLFD 59
>UniRef50_A7HCA1 Cluster: Nuclease SbcCD, D subunit; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Nuclease SbcCD, D
subunit - Anaeromyxobacter sp. Fw109-5
Length = 386
Score = 33.9 bits (74), Expect = 4.9
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
LRIL SD HLG ++ ED A E + + + D +L+ GD+FD+
Sbjct: 8 LRILHTSDWHLGRALHEESLLEDQAWALERLREVLREARPDALLIAGDVFDR 59
>UniRef50_A7BEB8 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 425
Score = 33.9 bits (74), Expect = 4.9
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 69 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLF 248
D+ A + IL SD HLG + G+ + E +++L + VD +L+ GD+F
Sbjct: 15 DVGALCHTGDMLILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVF 74
Query: 249 DQ 254
D+
Sbjct: 75 DR 76
>UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 283
Score = 33.9 bits (74), Expect = 4.9
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 293 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPV-GQGSVSS 469
II KY +K S E LS+++ NF ++ +NIS I + N + P+ G+V+S
Sbjct: 158 IIDKYIDKNKAYSQEELSNELNNFFNNFYLQNFQINISQDIFKANDNENQPIHDDGTVTS 217
>UniRef50_Q88WS0 Cluster: Exonuclease SbcD; n=2;
Lactobacillales|Rep: Exonuclease SbcD - Lactobacillus
plantarum
Length = 393
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/52 (28%), Positives = 33/52 (63%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
+++L +D H+G N ++ AF+++L++A+ VD I++ GD++D+
Sbjct: 1 MKLLHTADWHIGRTLNGYSLLDEQEAAFKQILTIALAEKVDGIVIAGDIYDR 52
>UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=6;
Bacteria|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 418
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 356 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLVN 502
+ F+RT+ P N P +++ GNHD + S+S ++ LS G ++
Sbjct: 65 RTFARTIETLQPLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQMGYIH 113
>UniRef50_Q6I2G3 Cluster: DNA repair exonuclease family protein;
n=11; Bacillus cereus group|Rep: DNA repair exonuclease
family protein - Bacillus anthracis
Length = 432
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 162 EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
+ +F +FE ++ A+Q VD +LL GDL+D
Sbjct: 54 QSTFESFERIIDKAIQERVDFVLLAGDLYD 83
>UniRef50_Q04FF3 Cluster: DNA repair exonuclease; n=2; Oenococcus
oeni|Rep: DNA repair exonuclease - Oenococcus oeni
(strain BAA-331 / PSU-1)
Length = 413
Score = 33.5 bits (73), Expect = 6.5
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 168 SFIAFEEVLSLAVQCDVDLILLGGDLFD 251
+F AF V+ LAV VD +L GDLFD
Sbjct: 45 TFTAFSNVIKLAVDRHVDFVLFPGDLFD 72
>UniRef50_Q6CKL0 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 369
Score = 33.5 bits (73), Expect = 6.5
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 542 HQYFCKKVLRGSPSMGLSHLKDQRLSRLFAEK---KVEMERPDETLGLGSIYLYYIQIML 712
H + C K++ G+ +HL ++L+ L +K V + ++ + LG YL + M
Sbjct: 83 HWFICTKIMSGNNLSSANHLDSEKLTELLRKKYPFLVMYDGKNDVIDLGKFYLGFAHFMS 142
Query: 713 TEDT 724
E T
Sbjct: 143 REIT 146
>UniRef50_Q7UKG1 Cluster: Probable phosphoesterase yhaO-putative DNA
repair exonuclease; n=1; Pirellula sp.|Rep: Probable
phosphoesterase yhaO-putative DNA repair exonuclease -
Rhodopirellula baltica
Length = 431
Score = 33.1 bits (72), Expect = 8.6
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Frame = +3
Query: 102 RILIASDIHLGF-------MENDPVRG--EDSFIAFEEVLSLAVQCDVDLILLGGDLFD 251
RIL A+DIHL E+ PV E S A E + LA++ VDL+++ GDL+D
Sbjct: 5 RILHAADIHLDSPLQKLDAYEDAPVDEIREASRRALENMTDLAIEEQVDLVVIAGDLYD 63
>UniRef50_Q65LT8 Cluster: YhaO; n=4; Bacillus|Rep: YhaO - Bacillus
licheniformis (strain DSM 13 / ATCC 14580)
Length = 414
Score = 33.1 bits (72), Expect = 8.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 168 SFIAFEEVLSLAVQCDVDLILLGGDLFDQLN 260
+F + E V LA+ D ILL GDLFD+ N
Sbjct: 42 TFKSAENVFKLAIDEQADFILLAGDLFDEAN 72
>UniRef50_Q2RL80 Cluster: Metallophosphoesterase; n=1; Moorella
thermoacetica ATCC 39073|Rep: Metallophosphoesterase -
Moorella thermoacetica (strain ATCC 39073)
Length = 374
Score = 33.1 bits (72), Expect = 8.6
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Frame = +3
Query: 102 RILIASDIHLGFMEN--DPVRGEDSFIAFEEVLSLAVQCDVD------LILLGGDLFD 251
R+L +D+HLG+ + PVR E+ + A VL AV +D L+L+ GDLFD
Sbjct: 3 RVLHLADLHLGYRPDLPAPVR-EEVYRARNRVLQAAVDLALDPRQGISLVLIAGDLFD 59
>UniRef50_A6P235 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 380
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 99 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDLFDQ 254
++++ SD+HLG ND ED E+L + + D +L+ GD++D+
Sbjct: 1 MKLIHLSDLHLGKRVNDFSMLEDQQYILAEILQIIDREKPDGVLIAGDVYDK 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,428,748
Number of Sequences: 1657284
Number of extensions: 17191251
Number of successful extensions: 39428
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 37838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39313
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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