Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30107
(439 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 126 2e-28
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 92 4e-18
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 92 5e-18
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 84 1e-15
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 83 3e-15
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 82 4e-15
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 77 2e-13
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 69 3e-11
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 68 8e-11
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 64 1e-09
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 63 2e-09
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 63 3e-09
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 61 9e-09
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 60 2e-08
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 58 6e-08
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 55 6e-07
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 53 2e-06
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 42 0.006
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 42 0.008
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 39 0.054
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 38 0.071
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 33 2.0
UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=2... 33 2.7
UniRef50_Q6C327 Cluster: Yarrowia lipolytica chromosome F of str... 33 2.7
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 33 3.5
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 32 6.2
UniRef50_Q4QIA6 Cluster: Putative uncharacterized protein; n=2; ... 31 8.1
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 126 bits (305), Expect = 2e-28
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = -2
Query: 246 VRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 67
+RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FPRDM+RP
Sbjct: 17 LRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFPRDMARP 76
Query: 66 QAVQR 52
Q VQR
Sbjct: 77 QNVQR 81
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 92.3 bits (219), Expect = 4e-18
Identities = 40/46 (86%), Positives = 43/46 (93%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVE
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVE 46
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 91.9 bits (218), Expect = 5e-18
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMS 73
AAVRDI++ASVY + LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M
Sbjct: 48 AAVRDISEASVYEGYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMR 107
Query: 72 RP 67
+P
Sbjct: 108 KP 109
Score = 90.2 bits (214), Expect = 2e-17
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVE
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVE 46
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 83.8 bits (198), Expect = 1e-15
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVE
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVE 46
Score = 81.0 bits (191), Expect = 1e-14
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 100
AAVRDI++ SV+ + LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 48 AAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 83.0 bits (196), Expect = 3e-15
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVER 252
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQ 47
Score = 80.6 bits (190), Expect = 1e-14
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMS 73
AA+RD+ +ASVY + LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R
Sbjct: 48 AAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKED 107
Query: 72 RPQAVQ 55
P+ Q
Sbjct: 108 TPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 82.2 bits (194), Expect = 4e-15
Identities = 34/52 (65%), Positives = 45/52 (86%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 97
AAVRD+++ASVYP + LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 48 AAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
Score = 72.1 bits (169), Expect = 5e-12
Identities = 41/93 (44%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE----RRRSEILTMP 225
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVE R SE P
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 224 LYTQCXXXXXXXXXXXTACHAPSTAKLSGTDRR 126
Y A HA S DR+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRK 93
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 77.0 bits (181), Expect = 2e-13
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVE
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVE 46
Score = 73.3 bits (172), Expect = 2e-12
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMS 73
AAVRDI+D S ++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + +
Sbjct: 48 AAVRDISDNSALTKYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTN 106
Query: 72 RPQAVQ 55
+ QAV+
Sbjct: 107 KQQAVK 112
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 69.3 bits (162), Expect = 3e-11
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 103
AAVRDI+ A+V+ + LP LY KLHYCVSCAIHS+VVRN K RR P
Sbjct: 48 AAVRDIDKANVFKAYMLPMLYVKLHYCVSCAIHSEVVRNHLLKLRRTEHP 97
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -3
Query: 362 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
AK G GHV+ V C + A C+PKDKAI KF+I+NI+E
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAI-KFIIQNILE 46
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 68.1 bits (159), Expect = 8e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -2
Query: 255 TAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 97
+AA+RD+ ++ + + LPKLY K++Y +S AIHSKVVR RS++ RRIR PPK
Sbjct: 156 SAAIRDLQESCAFESYTLPKLYRKVYYSISAAIHSKVVRVRSREARRIRDPPK 208
Score = 39.1 bits (87), Expect = 0.041
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -3
Query: 341 VKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
VK V C + VPKDKA+++F++RNIVE
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVE 155
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLY--AKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRD 79
AAVRDI++ASV+ + LPKLY KL+YCV CAIH KVVRN K + +T P P
Sbjct: 43 AAVRDISEASVFNAYVLPKLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSR 102
Query: 78 MSRPQ 64
+ PQ
Sbjct: 103 SAAPQ 107
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -3
Query: 377 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VE
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVE 41
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 63.3 bits (147), Expect = 2e-09
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVD 46
Score = 57.2 bits (132), Expect = 1e-07
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = -2
Query: 243 RDINDASVYPM--FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSR 70
RDI + Y F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R R
Sbjct: 51 RDIQENYAYAQSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVR 107
Query: 69 PQA 61
P+A
Sbjct: 108 PEA 110
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 62.9 bits (146), Expect = 3e-09
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVD 46
Score = 59.3 bits (137), Expect = 4e-08
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 103
++ +D++DA +Y ++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 48 SSAKDVSDACIYQGYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 61.3 bits (142), Expect = 9e-09
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = -2
Query: 204 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 91
+PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 144 IPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVD 124
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 60.5 bits (140), Expect = 2e-08
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = -3
Query: 392 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLD 48
Score = 52.0 bits (119), Expect = 5e-06
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = -2
Query: 252 AAVRDINDAS-VYPM-FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 88
A+ RD+ +AS VY F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 50 ASARDVAEASPVYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 58.4 bits (135), Expect = 6e-08
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVD 46
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = -2
Query: 252 AAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 109
+++RD+ D+ +Y + +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 48 SSLRDLQDSCIYEYYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = -2
Query: 336 SCEMHKLRAVRAKGQGYQKVRD*EHRRTAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI 157
S + K +V K + ++ R A+ D+ A++Y +F++P++ K +CVSCA
Sbjct: 17 SIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCAC 76
Query: 156 HSKVVRNRSKKDRRIR 109
H+K+VR RS + R+IR
Sbjct: 77 HAKIVRVRSSQARKIR 92
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = -3
Query: 380 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVER 252
RRN GR K RG +++C C PKDKAIK+F I++++E+
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQ 44
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 53.2 bits (122), Expect = 2e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNI 261
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSL 44
Score = 35.1 bits (77), Expect = 0.66
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -2
Query: 246 VRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 112
++D + V P ++ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 50 LKDTPNVFVLPGYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 41.9 bits (94), Expect = 0.006
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAI 285
M +KR + GR K +G V+C NC R VP DKAI
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAI 36
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 350 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVE 255
R +V+ + NC + +PKDKA KKFV RNIVE
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVE 65
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 38.7 bits (86), Expect = 0.054
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 392 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 282
M +KR+N GR K +G + C NC + +P+ KA++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVR 37
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 38.3 bits (85), Expect = 0.071
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 386 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 282
+KR+N GR K +G V C NC + +P+ KA++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVR 41
Score = 34.7 bits (76), Expect = 0.87
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 204 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 64
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 33.5 bits (73), Expect = 2.0
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 198 KLYAKLHYCVSCAIHSKV 145
+ Y KLH CVSCAIH KV
Sbjct: 53 RFYVKLHCCVSCAIHIKV 70
>UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=21;
Cyanobacteria|Rep: Aldo/keto reductase family protein -
Synechococcus sp. (strain WH7803)
Length = 385
Score = 33.1 bits (72), Expect = 2.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -3
Query: 425 RSLFTGSEVRNMTRKRRNG-GRAKHGRGHVKAVRCTNCARCVPK 297
R+L G ++R +R N GRA H VKA C +C C+P+
Sbjct: 314 RNLTLGHDLREFAEERYNLIGRAGHWWETVKADACAHCGDCLPR 357
>UniRef50_Q6C327 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 369
Score = 33.1 bits (72), Expect = 2.7
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 380 RRNGGRAKHGRGH--VKAVRCTNCARCVPKDKAIKKFVIRNIVERRRSE 240
RRN +H R H V+ CT C+R + A+K+ + N ER + +
Sbjct: 310 RRNHDLRRHKRSHLPVRPFPCTTCSRSFSRKDALKRHLAANACERGKKK 358
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 32.7 bits (71), Expect = 3.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -3
Query: 383 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVERRRSEILTMPLYTQ 213
+RR GR + G G AVRC C +P+ ++++ +R E + E+ + + +Q
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLERH-LREHEETSKKELDVIKVLSQ 1441
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 398 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAI 285
RN RK R+G + RG V C C VP+ KAI
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAI 40
>UniRef50_Q4QIA6 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 2188
Score = 31.5 bits (68), Expect = 8.1
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 156 GWRMTRSSGA*RIT*GAGTLGIQRHR*YL*PPPFYDVPNHELFDSLVLWHAPRAVCASHS 335
G+ + R + R+ A + Q H+ L PP PN +LF S + HAP ++C
Sbjct: 1032 GFSLQRPTAPSRVAGEAPSAEKQPHQQRLKLPPR---PNFQLFSSRLEPHAPLSLCTLFD 1088
Query: 336 FNVTTSMLGASSITALTSHVS 398
++ + ++T L + V+
Sbjct: 1089 YDASADQAAKRTVTQLAAAVA 1109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,758,153
Number of Sequences: 1657284
Number of extensions: 6703788
Number of successful extensions: 18186
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 17688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18179
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -