Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30095
         (812 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    38   0.40 
UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to endonuclea...    37   0.53 
UniRef50_Q4X4Y7 Cluster: Putative uncharacterized protein; n=1; ...    36   0.92 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   2.8  
UniRef50_A7RR01 Cluster: Predicted protein; n=4; Nematostella ve...    34   3.7  
UniRef50_A1ZCE9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q4N856 Cluster: Tash1 protein, putative; n=1; Theileria...    33   6.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.5 bits (83), Expect = 0.40
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 391 DELTAHLVLSGYWSP 435
           DELTAHLVLSGYWSP
Sbjct: 161 DELTAHLVLSGYWSP 175


>UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to
           endonuclease-reverse transcriptase; n=5;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease-reverse transcriptase - Strongylocentrotus
           purpuratus
          Length = 890

 Score = 37.1 bits (82), Expect = 0.53
 Identities = 24/71 (33%), Positives = 34/71 (47%)
 Frame = +2

Query: 353 IHENLKNLIAYMGTSSQPTWC*VVTGAHRLLRRKCATHLEI*VLRSQVPIVTRLPHPSTQ 532
           +++ LKN  A +G    PT    +  AHRL RR  A        R  VPI+ R  +   +
Sbjct: 33  VYKVLKNAFATLGVDDAPTIA--IANAHRLPRRGAADQTS---QRGPVPIIARFCYMENR 87

Query: 533 NALLLHCRNRQ 565
           NA+L    N+Q
Sbjct: 88  NAILAAFDNQQ 98


>UniRef50_Q4X4Y7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 99

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 258 HQTYYILNN--KLQYTYYYRHYYEKLWVDHFCADIYNFPH 145
           ++ Y++L+N   L Y Y Y  YY +L V H C   +  PH
Sbjct: 38  YRFYFLLHNLSSLLYAYKYLGYYLQLLVSHHCVSFFQLPH 77


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = +1

Query: 571 WYLPVRTHKRSYH 609
           WYLP RTHKRSYH
Sbjct: 572 WYLPARTHKRSYH 584


>UniRef50_A7RR01 Cluster: Predicted protein; n=4; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 325

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 551 CRNRQGGGTYPCGLTRGLTTTHC-SIITMVSLGHFCADGLI*CSLRAAGKN 700
           C N Q G  Y C  + G T  HC ++I    +   C++G I C+    GKN
Sbjct: 140 CNNTQDGKNYTCTCSPGYTGRHCDTVIPKACVSSPCSNGSI-CNNTQDGKN 189



 Score = 34.3 bits (75), Expect = 3.7
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 551 CRNRQGGGTYPCGLTRGLTTTHC-SIITMVSLGHFCADGLI*CSLRAAGKN 700
           C N Q G  Y C  + G T  HC ++I    +   C++G I C+    GKN
Sbjct: 181 CNNTQDGKNYTCTCSPGYTGRHCDTVIPKACVSSPCSNGSI-CNNTQDGKN 230


>UniRef50_A1ZCE9 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 225

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +1

Query: 565 GRWYLPVRTHKRSYHHSLLHNNYGKLRPLL 654
           G WYL VRT KR Y ++ ++ NY KLR LL
Sbjct: 179 GYWYLQVRTPKRVYKYN-VNINYCKLRKLL 207


>UniRef50_Q4N856 Cluster: Tash1 protein, putative; n=1; Theileria
           parva|Rep: Tash1 protein, putative - Theileria parva
          Length = 257

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 297 LLSIAETRDTPVLHQTYYILNNKLQYTYYYRHYYEKLWVD 178
           +L I E  D PV HQ YY+   +  Y Y  R  +EK +V+
Sbjct: 60  ILMIIEV-DNPVKHQVYYLNRCRTHYVYITREQFEKEFVE 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,247,746
Number of Sequences: 1657284
Number of extensions: 16164964
Number of successful extensions: 35374
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35260
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)